Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0468
         (648 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q554N7 Cluster: EGF-like domain-containing protein; n=2...    34   3.4  
UniRef50_UPI000065E29B Cluster: Protein Dok-7 (Downstream of tyr...    33   4.5  
UniRef50_Q89K70 Cluster: Bll5041 protein; n=2; Bradyrhizobiaceae...    33   7.9  
UniRef50_A1VLJ8 Cluster: Putative uncharacterized protein; n=1; ...    33   7.9  

>UniRef50_Q554N7 Cluster: EGF-like domain-containing protein; n=2;
            Dictyostelium discoideum|Rep: EGF-like domain-containing
            protein - Dictyostelium discoideum AX4
          Length = 1918

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +2

Query: 110  GDSFQFCK-MTSCCTCEGHHSGAKSSLPLV 196
            G SF  C   T  CTC+G   GA  SLPL+
Sbjct: 1256 GSSFGSCNNQTGVCTCDGSQQGADCSLPLI 1285


>UniRef50_UPI000065E29B Cluster: Protein Dok-7 (Downstream of
           tyrosine kinase 7).; n=1; Takifugu rubripes|Rep: Protein
           Dok-7 (Downstream of tyrosine kinase 7). - Takifugu
           rubripes
          Length = 233

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
 Frame = +2

Query: 164 HSGAKSSLPLVCLVP-----RDGASSEARTKPRPA*LGPQLKMISSCSTRSTSGKTLSC 325
           H+  K++L  +CL+       D AS+E R     + L  +L M+S CS  S++  T SC
Sbjct: 55  HANVKTTLSPLCLLGPADLGADPASAEERICQEASDLEKRLSMLSECSLASSTASTYSC 113


>UniRef50_Q89K70 Cluster: Bll5041 protein; n=2;
           Bradyrhizobiaceae|Rep: Bll5041 protein - Bradyrhizobium
           japonicum
          Length = 603

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 16/33 (48%), Positives = 23/33 (69%)
 Frame = +1

Query: 199 PGSSRWSIFGSQDKAPACIAGPTTQNDFQLLDE 297
           PG + WS+FG+   AP  +A PT Q++ QLLD+
Sbjct: 85  PGGAMWSLFGAM-VAPG-VAVPTAQHEQQLLDK 115


>UniRef50_A1VLJ8 Cluster: Putative uncharacterized protein; n=1;
           Polaromonas naphthalenivorans CJ2|Rep: Putative
           uncharacterized protein - Polaromonas naphthalenivorans
           (strain CJ2)
          Length = 1991

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 23/68 (33%), Positives = 34/68 (50%)
 Frame = -1

Query: 372 GYKGTSIRVQIQRPLWQLKVFPDVLLVEQLEIILSCGPSYAGRGFVLASEDAPSRGTRQT 193
           GY      V + R L    +  +   VE LE+++SC P++A RG  L  +   +  TR+ 
Sbjct: 38  GYAAIQNAVPVVRALRLTNLMAET--VENLEVVVSCSPAFA-RGLKLRFDKLAAGETRRI 94

Query: 192 SGRLDLAP 169
           S  LDL P
Sbjct: 95  S-PLDLQP 101


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 660,580,121
Number of Sequences: 1657284
Number of extensions: 13729260
Number of successful extensions: 35975
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 34780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35955
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)