Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0468
(648 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 28 0.058
AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface pro... 24 0.94
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 23 2.9
AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory recept... 22 3.8
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 22 3.8
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 6.6
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 21 6.6
AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory recept... 21 6.6
AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger tran... 21 6.6
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 6.6
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 6.6
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 6.6
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 6.6
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 6.6
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 21 8.7
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 28.3 bits (60), Expect = 0.058
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -1
Query: 93 VFKLFCLCFYHFFVCFNLF 37
V LF LC YHFF F +F
Sbjct: 158 VHLLFLLCIYHFFCAFIIF 176
Score = 22.6 bits (46), Expect = 2.9
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 81 FCLCFYHFFVCFNLF 37
F LC Y+F+ F +F
Sbjct: 142 FLLCIYYFYCAFIIF 156
Score = 21.8 bits (44), Expect = 5.0
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -1
Query: 84 LFCLCFYHFFVCFNLF 37
+ LC Y+F+ F LF
Sbjct: 233 IILLCIYYFYYAFILF 248
Score = 21.4 bits (43), Expect = 6.6
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -1
Query: 93 VFKLFCLCFYHFFVCFNLFKFCTKNFMSFF 4
V LF LC Y+F V F C F F
Sbjct: 125 VHLLFLLCIYYFVVPL-FFLLCIYYFYCAF 153
>AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface
protein chaoptin protein.
Length = 782
Score = 24.2 bits (50), Expect = 0.94
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3
Query: 271 ELWAQLCRPGLCPGFRRCSIARN 203
E+W + R LCP R SI RN
Sbjct: 718 EVWERKRRQYLCPVLLRVSILRN 740
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 22.6 bits (46), Expect = 2.9
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = +3
Query: 180 RVCRWSAWFLAMEHLRKPGQSPGLHSWAHNSK 275
++C W E +KPG P SW +K
Sbjct: 1142 KICDWPKSAKCEE--KKPGHKPSTSSWQKPTK 1171
>AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory receptor
candidate 38 protein.
Length = 436
Score = 22.2 bits (45), Expect = 3.8
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = -1
Query: 423 ILSG*VEMLTVFLCHRKGYKGTSIRVQIQRPL 328
I +G + F+C Y +RVQ Q+ L
Sbjct: 323 INAGLAIFILYFICDEAHYASNCLRVQFQKKL 354
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 22.2 bits (45), Expect = 3.8
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = -3
Query: 316 SFS*CTPRRATGNHFELWAQLCRPGLCPGFRRC 218
SFS P G E+ CRPG C C
Sbjct: 243 SFSCSCPSGTLGYICEINVDDCRPGACHNNGTC 275
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 463 GESISAPSVFPYMKTRAEKQSEV 531
G+S + P ++P+MK QS V
Sbjct: 192 GQSSNPPQIYPWMKRVHLGQSTV 214
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 463 GESISAPSVFPYMKTRAEKQSEV 531
G+S + P ++P+MK QS V
Sbjct: 192 GQSSNPPQIYPWMKRVHLGQSTV 214
>AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory receptor
candidate 41 protein.
Length = 398
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = -2
Query: 581 VYIIRKL*YVYYFFIIITSLCFSALVFIYG 492
+YI+ L Y+ +++T L F + I+G
Sbjct: 274 LYILESLLYMVTKLVVVTFLKFIKKIQIFG 303
>AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger
transcription factor protein.
Length = 228
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +1
Query: 457 DPGESISAPSVFPYMKTRAEK 519
DP + + + S F Y+K +E+
Sbjct: 143 DPDDELRSSSAFSYIKPSSER 163
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 463 GESISAPSVFPYMKTRAEKQSEV 531
G+S + P ++P+MK QS V
Sbjct: 192 GQSSNPPQIYPWMKRVHLGQSTV 214
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 463 GESISAPSVFPYMKTRAEKQSEV 531
G+S + P ++P+MK QS V
Sbjct: 192 GQSSNPPQIYPWMKRVHLGQSTV 214
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 463 GESISAPSVFPYMKTRAEKQSEV 531
G+S + P ++P+MK QS V
Sbjct: 148 GQSSNPPQIYPWMKRVHLGQSTV 170
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 463 GESISAPSVFPYMKTRAEKQSEV 531
G+S + P ++P+MK QS V
Sbjct: 192 GQSSNPPQIYPWMKRVHLGQSTV 214
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 463 GESISAPSVFPYMKTRAEKQSEV 531
G+S + P ++P+MK QS V
Sbjct: 192 GQSSNPPQIYPWMKRVHLGQSTV 214
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/32 (28%), Positives = 14/32 (43%)
Frame = -2
Query: 227 PKMLHREEPGRPAADST*HRYGGPRKCSSLSS 132
P + PG+PA +T P +S +S
Sbjct: 146 PLSVSTSPPGKPATSTTSQNLSSPASSTSSTS 177
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,789
Number of Sequences: 336
Number of extensions: 3675
Number of successful extensions: 20
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -