Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0468
         (648 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060379-1|AAL25418.1|  268|Drosophila melanogaster LD26833p pro...    28   9.5  
AE014296-2874|AAF49370.2|  268|Drosophila melanogaster CG7725-PA...    28   9.5  
AE014296-2873|AAN11734.1|  343|Drosophila melanogaster CG7725-PB...    28   9.5  

>AY060379-1|AAL25418.1|  268|Drosophila melanogaster LD26833p
           protein.
          Length = 268

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 11/19 (57%), Positives = 15/19 (78%), Gaps = 2/19 (10%)
 Frame = +3

Query: 477 CAERFPI--YENEGRKAKR 527
           CA RFP+  YENEG+K ++
Sbjct: 41  CAHRFPVPLYENEGKKTEK 59


>AE014296-2874|AAF49370.2|  268|Drosophila melanogaster CG7725-PA,
           isoform A protein.
          Length = 268

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 11/19 (57%), Positives = 15/19 (78%), Gaps = 2/19 (10%)
 Frame = +3

Query: 477 CAERFPI--YENEGRKAKR 527
           CA RFP+  YENEG+K ++
Sbjct: 41  CAHRFPVPLYENEGKKTEK 59


>AE014296-2873|AAN11734.1|  343|Drosophila melanogaster CG7725-PB,
           isoform B protein.
          Length = 343

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 11/19 (57%), Positives = 15/19 (78%), Gaps = 2/19 (10%)
 Frame = +3

Query: 477 CAERFPI--YENEGRKAKR 527
           CA RFP+  YENEG+K ++
Sbjct: 116 CAHRFPVPLYENEGKKTEK 134


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,475,954
Number of Sequences: 53049
Number of extensions: 640938
Number of successful extensions: 1646
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1646
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)