Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0468
(648 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 26 0.27
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 24 1.1
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 24 1.1
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.5
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.5
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.5
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.5
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.5
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.5
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.5
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.5
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 23 2.5
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 23 3.4
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 22 5.9
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 26.2 bits (55), Expect = 0.27
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -2
Query: 587 TFVYIIRKL*YVYYFFIIITSLCFSALVFIYGKTLGAD 474
TFV IIR+ +YYFF +I A + + G TL D
Sbjct: 222 TFVVIIRRRT-LYYFFNLIVPCVLIASMAVLGFTLPPD 258
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 24.2 bits (50), Expect = 1.1
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -1
Query: 117 ESPKNTLKVFKLFCLCFYHFFVCFNLFKFCTK 22
++ K V +F +C+ FF C + CTK
Sbjct: 616 KATKTLAIVLGVFLICWLPFFTCNIMDAICTK 647
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 24.2 bits (50), Expect = 1.1
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +3
Query: 444 GRLLGSRXINICAERFPIYENEGRKAKRSDDDEEI-IYILQL 566
GRL ++ E P E E RKA + D I YI+ L
Sbjct: 596 GRLTSKHDNSLYDEYIPFLERELRKAHQEKDSPRIQTYIMAL 637
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.5
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = -2
Query: 239 LSWLPKMLHREEPGRPAADST*HRYGGPRKCSSL 138
L WLP +L PG+ T GG R+ +
Sbjct: 300 LQWLPCLLRMSRPGKKITKKT--ILGGNRRAKGM 331
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.5
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = -2
Query: 239 LSWLPKMLHREEPGRPAADST*HRYGGPRKCSSL 138
L WLP +L PG+ T GG R+ +
Sbjct: 300 LQWLPCLLRMSRPGKKITKKT--ILGGNRRAKGM 331
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.5
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = -2
Query: 239 LSWLPKMLHREEPGRPAADST*HRYGGPRKCSSL 138
L WLP +L PG+ T GG R+ +
Sbjct: 300 LQWLPCLLRMSRPGKKITKKT--ILGGNRRAKGM 331
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.5
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = -2
Query: 239 LSWLPKMLHREEPGRPAADST*HRYGGPRKCSSL 138
L WLP +L PG+ T GG R+ +
Sbjct: 300 LQWLPCLLRMSRPGKKITKKT--ILGGNRRAKGM 331
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.5
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = -2
Query: 239 LSWLPKMLHREEPGRPAADST*HRYGGPRKCSSL 138
L WLP +L PG+ T GG R+ +
Sbjct: 300 LQWLPCLLRMSRPGKKITKKT--ILGGNRRAKGM 331
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.5
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = -2
Query: 239 LSWLPKMLHREEPGRPAADST*HRYGGPRKCSSL 138
L WLP +L PG+ T GG R+ +
Sbjct: 300 LQWLPCLLRMSRPGKKITKKT--ILGGNRRAKGM 331
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 2.5
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = -2
Query: 239 LSWLPKMLHREEPGRPAADST*HRYGGPRKCSSL 138
L WLP +L PG+ T GG R+ +
Sbjct: 368 LQWLPCLLRMSRPGKKITKKT--ILGGNRRAKGM 399
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 2.5
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = -2
Query: 239 LSWLPKMLHREEPGRPAADST*HRYGGPRKCSSL 138
L WLP +L PG+ T GG R+ +
Sbjct: 368 LQWLPCLLRMSRPGKKITKKT--ILGGNRRAKGM 399
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 23.0 bits (47), Expect = 2.5
Identities = 7/23 (30%), Positives = 15/23 (65%)
Frame = -1
Query: 624 NPWRSDGLTMPKDICIHNQEAVI 556
NP + + MP+D+C ++ + +I
Sbjct: 68 NPCKHPTIIMPQDVCFNDLKFII 90
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = +1
Query: 352 YRRPLITFPMTQEDCKHFNLARKYKINQ 435
Y+RP TF D +H++ ++ + N+
Sbjct: 159 YKRPRTTFEPRATDSRHYDRYKEEESNE 186
Score = 22.2 bits (45), Expect = 4.4
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +2
Query: 290 STRSTSGKTLSCHRGRCIWTRIDV 361
++R SG++ S H G WT+ D+
Sbjct: 393 NSRGHSGQSSSHHHGSKSWTQEDM 416
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 22.6 bits (46), Expect = 3.4
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -2
Query: 125 IETSPQKTR*KCLNCFAYVSIIFLFVLIYLNF 30
I + T KC + FAY++ + F L+ +F
Sbjct: 182 IAVDVRDTEDKCKDTFAYIADVTGFALLVYDF 213
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 443 NICWLILYF 417
NI WLILYF
Sbjct: 4 NIWWLILYF 12
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,976
Number of Sequences: 438
Number of extensions: 4341
Number of successful extensions: 24
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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