Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0466
(697 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19E9.02 |fin1||serine/threonine protein kinase Fin1|Schizosa... 29 0.84
SPAC16.03c |ura2||dihydroorotase Ura2 |Schizosaccharomyces pombe... 28 1.1
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 27 2.6
SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 3.4
SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces ... 27 3.4
SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pomb... 27 3.4
SPCC736.12c |||conserved protein|Schizosaccharomyces pombe|chr 3... 27 3.4
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 26 4.5
SPAC18G6.05c |||translation elongation regulator Gcn1 |Schizosac... 26 4.5
SPBC16H5.13 |||WD repeat protein |Schizosaccharomyces pombe|chr ... 26 4.5
SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase ... 26 4.5
SPAC3A11.09 |sod22||plasma membrane alkali metal cation/H+ antip... 26 5.9
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb... 26 5.9
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 25 7.8
SPAP8A3.14c |||mitochondrial inner membrane protein |Schizosacch... 25 7.8
SPAC31A2.06 |||conserved fungal protein|Schizosaccharomyces pomb... 25 7.8
SPCPB1C11.02 |||amino acid permease, unknown 16|Schizosaccharomy... 25 7.8
>SPAC19E9.02 |fin1||serine/threonine protein kinase
Fin1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 722
Score = 28.7 bits (61), Expect = 0.84
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +2
Query: 401 CHHDMWGQGPMQNITTQRHDYVPKPSVLRESFKPAHSTTASNNRLKIG 544
CH+ P + R + PK SVL KPA+ NN +K+G
Sbjct: 123 CHYGE--NAPACDSQWPREIFHPKQSVLHRDIKPANIFLDENNSVKLG 168
>SPAC16.03c |ura2||dihydroorotase Ura2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 337
Score = 28.3 bits (60), Expect = 1.1
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 40 LPNPVMKKETVPWACKGQYEKPCQKLDGNTTYTMS-YLDAKS 162
+PN + TV AC QY+K ++LD TTY MS YL ++
Sbjct: 39 MPNLIPPITTVD-ACL-QYKKEIEQLDSKTTYLMSLYLSPET 78
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 27.1 bits (57), Expect = 2.6
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 6/58 (10%)
Frame = +1
Query: 148 LDAKSDCRRQPILPTACSNPVSA---SKRFETQTIYKNSIYR---PRATIPTPVKPSP 303
L ++ D R I+ P SA SK+ ++ + ++ PRATIP +P P
Sbjct: 69 LSSRIDANRASIMSATMGTPPSALKFSKKKISRPVVSEDTFKDKLPRATIPVKPEPQP 126
>SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 26.6 bits (56), Expect = 3.4
Identities = 27/101 (26%), Positives = 37/101 (36%), Gaps = 2/101 (1%)
Frame = +1
Query: 304 NIIASTAQMEGDTVQKLSYLPNPVCVTQSXPALPPRHVGSGSHAEHHHATTRLRAQAVCT 483
N+ T + + +P+ VT + P +G G H ATT RA A
Sbjct: 298 NVQQETVFEDASDIPHADVIPHTTTVTVEEES--PIALGQGGVT--HEATTSARASASGI 353
Query: 484 PGVVQTGSQYHCVEQPFEN-RTVNRXSFLD-PGRVPLPESY 600
PG + Q + P TV F + P R PE Y
Sbjct: 354 PGAFEEVQQTVQEDLPHPTAETVEIARFAEQPVRAQQPEQY 394
>SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 803
Score = 26.6 bits (56), Expect = 3.4
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = +1
Query: 313 ASTAQMEGDTVQKLSYLPNPVCVTQSXPALPPRHVGSGSHAEHHHAT 453
AST D LS PNP V + H SH+ +H+++
Sbjct: 548 ASTPLSTDDIATPLSSAPNPPSVMPTYARKTSSHSERSSHSSYHNSS 594
>SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1778
Score = 26.6 bits (56), Expect = 3.4
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +3
Query: 399 PATTTCGVRVPCRTSPRNDTTTCPSRLYSGSRSNRLTVPLRRTTV*KSDRESXVVFGPGT 578
P+TTT G+ T+ + T+ + L+ GS++ + PL + ++ ++ + +F T
Sbjct: 592 PSTTTSGLFGASNTNNQAQTSNFGTGLFGGSQAGQQQQPL-QASIDQNPYGNNPLFSSTT 650
Query: 579 S--APTGI 596
S APT I
Sbjct: 651 SQVAPTSI 658
>SPCC736.12c |||conserved protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 437
Score = 26.6 bits (56), Expect = 3.4
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 487 GVVQTGS-QYHCVEQPFENRTVNRXSFLDPGRVPLPESYAPVKCYEKXTAKMES 645
G+ +GS +Y V P R + S L+P LP S APV Y + ++ + S
Sbjct: 242 GIASSGSTRYPFV--PANTRASHSPSLLEPYAHSLPSSVAPVGAYPEKSSYLLS 293
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 26.2 bits (55), Expect = 4.5
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +2
Query: 74 RGLVRDNMRSLVKSWTEIRHTQ*VTWTRKATVVDNPSYRLLAPTLSPLRR 223
+GL +DN++SL + W +R+ + AT +NP + ++ L ++R
Sbjct: 12 KGLTKDNIQSLYQQWQVMRN-------QGATEENNPEFAQISSILRMVQR 54
>SPAC18G6.05c |||translation elongation regulator Gcn1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2670
Score = 26.2 bits (55), Expect = 4.5
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 104 LVKSWTEIRHTQ*VTWTRKATVVDNPSYRLLAPTLSPLRRDLKR 235
L S +++R+T + R V+ NP + L PTL D R
Sbjct: 1531 LTDSHSQVRNTANKSLLRFGDVISNPEIQTLVPTLLKALSDCTR 1574
>SPBC16H5.13 |||WD repeat protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1026
Score = 26.2 bits (55), Expect = 4.5
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 181 WVVDDSRFSRPSNSLCMSYFRPTFDKASHIVP 86
W VD S + NS+ + +PTF K +VP
Sbjct: 177 WSVDWSALTFKRNSVTKADVKPTFGKVIDVVP 208
>SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase
Its3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 742
Score = 26.2 bits (55), Expect = 4.5
Identities = 24/99 (24%), Positives = 39/99 (39%), Gaps = 5/99 (5%)
Frame = +2
Query: 407 HDMWGQGPMQNITTQRHDYVPKPSVLRE-----SFKPAHSTTASNNRLKIGP*IGCRFWT 571
HD+ P + ++ H Y P S+ +E S AHS ++S+N I G
Sbjct: 58 HDVLHTNPKIEVRSETHIYEPNDSLFKENQDFPSNPTAHSPSSSSNDSVITA-TGVPDGI 116
Query: 572 RDECPYRNRMLPSSVTKXQQPKWRAXRXHKMSFQPVCVP 688
+ P + + P S P+ + + S QP P
Sbjct: 117 LRDSPIVSALEPPSSNSSSSPQLQNLKHQLSSPQPSRAP 155
>SPAC3A11.09 |sod22||plasma membrane alkali metal cation/H+
antiporter Sod22|Schizosaccharomyces pombe|chr
1|||Manual
Length = 759
Score = 25.8 bits (54), Expect = 5.9
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Frame = +1
Query: 343 VQKLSYLPN---PVCVTQSXPALPPRHVGSGSHAEH--HHATTRLRAQAVCTPGV 492
+ +LS+L + C+T + P L VG G A H L A++ C G+
Sbjct: 125 IPRLSFLESLAIAACITATDPVLASSIVGKGKFARRVPGHLRNMLLAESGCNDGM 179
>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 25.8 bits (54), Expect = 5.9
Identities = 8/35 (22%), Positives = 17/35 (48%)
Frame = +2
Query: 407 HDMWGQGPMQNITTQRHDYVPKPSVLRESFKPAHS 511
HD+W + ++ DY P P + S + +++
Sbjct: 263 HDLWADDDQATVNQRKLDYAPAPKLPPPSHEESYN 297
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 25.4 bits (53), Expect = 7.8
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Frame = +3
Query: 249 EQYLPATGNHTDASEAVAKHHRFDSSNGRGHGAK-----VVVPTEPGVRDAVXSG 398
E L + G + SEA +H R + G K V+V EPG DAV SG
Sbjct: 27 EHGLDSAGIYHGTSEA--QHERLNVYFNEAAGGKYVPRAVLVDLEPGTMDAVKSG 79
>SPAP8A3.14c |||mitochondrial inner membrane protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 677
Score = 25.4 bits (53), Expect = 7.8
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 226 FETQTIYKNSIYRPRATIPTPVKPSPNIIASTAQMEGDTVQK 351
+ T + ++ R T+P P+KPS N S+ +++ D QK
Sbjct: 347 WNTSVLSDEALTRNSLTLPVPIKPSINKDISSIEVK-DLSQK 387
>SPAC31A2.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 542
Score = 25.4 bits (53), Expect = 7.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -1
Query: 145 NSLCMSYFRPTFDK 104
N LC+S+FR FDK
Sbjct: 12 NKLCVSFFRSKFDK 25
>SPCPB1C11.02 |||amino acid permease, unknown 16|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 505
Score = 25.4 bits (53), Expect = 7.8
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = -1
Query: 283 SVWLPVAGKYCSY 245
SV++PVAG +C+Y
Sbjct: 74 SVYMPVAGSFCTY 86
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,163,438
Number of Sequences: 5004
Number of extensions: 68438
Number of successful extensions: 233
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 233
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 321151040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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