Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0466
(697 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0551 + 4361640-4363386,4363443-4363687 32 0.38
01_06_0209 - 27549615-27550246,27550358-27550452,27553290-275535... 32 0.50
06_03_0188 - 17691582-17692241 31 0.66
05_03_0218 - 10437377-10437622,10437896-10438141,10438528-104386... 31 0.66
01_06_1172 - 35115248-35115874 31 0.66
01_01_0050 - 382451-382864,382950-383020,383131-383176,383302-38... 31 0.66
11_02_0010 + 7322826-7323658,7324236-7324714,7325204-7326195 31 0.87
03_06_0003 + 30921197-30921388,30921514-30921632,30921742-309218... 30 2.0
11_01_0560 - 4413174-4414469 29 2.7
09_02_0362 + 7860088-7860197,7861606-7861636,7861738-7861801,786... 29 2.7
07_03_1160 - 24430240-24431268 29 2.7
12_01_0748 - 6728221-6728305,6728788-6728842,6729202-6729289,672... 29 3.5
07_03_0759 - 21299502-21299807,21299889-21300039,21300151-213003... 29 3.5
05_07_0145 + 28012268-28012624,28012734-28012794,28013758-280138... 29 3.5
01_06_0217 - 27624588-27625817,27626203-27626484,27626582-27626692 29 3.5
05_01_0248 - 1864092-1864204,1864570-1864608,1864661-1864730,186... 29 4.7
01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863... 29 4.7
03_04_0071 + 17048222-17048227,17048348-17048601,17048679-17048940 28 6.2
01_06_0552 + 30166699-30166797,30167094-30167562,30171536-301718... 28 6.2
07_03_0965 - 22996575-22999112,22999202-22999636,22999717-229998... 28 8.1
>11_01_0551 + 4361640-4363386,4363443-4363687
Length = 663
Score = 32.3 bits (70), Expect = 0.38
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 261 PATGNHTDASEAVAKHHRFDSSNGRGHGAKVVVPTEPGVRDA 386
PA G A+ A +K FD NGR G +V P G +A
Sbjct: 98 PAAGEKAAAAAASSKDQTFDDENGRTEGGALVKPESGGGDEA 139
>01_06_0209 -
27549615-27550246,27550358-27550452,27553290-27553507,
27553590-27553757
Length = 370
Score = 31.9 bits (69), Expect = 0.50
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 270 GNHTDASEAVAKHHRFDSSNGRGHG 344
GN+ AS A A+HH D G GHG
Sbjct: 289 GNNIKASNAAAEHHHNDGVGGGGHG 313
>06_03_0188 - 17691582-17692241
Length = 219
Score = 31.5 bits (68), Expect = 0.66
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2
Query: 297 RLHWRRYGCPWPVNT 253
RLHWRR+ PWP +T
Sbjct: 146 RLHWRRHATPWPSST 160
>05_03_0218 -
10437377-10437622,10437896-10438141,10438528-10438611,
10438720-10438854
Length = 236
Score = 31.5 bits (68), Expect = 0.66
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 61 KETVPWACKGQYEKPCQKLDGNTTYTMSYLDAK 159
KETV W + + E C + +G Y YLDAK
Sbjct: 29 KETVKWRRQYRPESICWEYEGRRAYIADYLDAK 61
>01_06_1172 - 35115248-35115874
Length = 208
Score = 31.5 bits (68), Expect = 0.66
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = -1
Query: 448 RGDVLHGTLTPHVVVAGPXSTASRTPGS 365
RG VLHG T H A + SR PGS
Sbjct: 166 RGSVLHGATTKHKPTAAAAAAGSRRPGS 193
>01_01_0050 -
382451-382864,382950-383020,383131-383176,383302-383333,
383409-383558,383666-383849,383934-384109,384580-384628,
384724-384923,385515-385548
Length = 451
Score = 31.5 bits (68), Expect = 0.66
Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Frame = +1
Query: 277 IPTPVKPSPNIIASTAQMEGDTVQKLSYLPNP-VCVTQSXPALP-PRHVGSGSHAEHHHA 450
+P P +PSP + + +E +Q+ Y P + + P P + G+ + ++HH
Sbjct: 296 MPVPGEPSPGAFPARSYVEQQRMQRPGYGFQPQMSNDRWNPGSPLTNYHGAPPYQQYHHG 355
Query: 451 TTRLRAQAVCTPGVVQTGSQYHCVEQPFENRTVNRXSFLDPGRVPLPESYAPVK 612
+T +A P + E PF+ R V P V +PE+ A ++
Sbjct: 356 STNAIDEA---PAPAPVPAPAPPAESPFQRRWVPP----QPPGVVMPEAVAAIR 402
>11_02_0010 + 7322826-7323658,7324236-7324714,7325204-7326195
Length = 767
Score = 31.1 bits (67), Expect = 0.87
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = -2
Query: 312 DDVWRRLHWRRYGCPWPVN---TVLINSLRFKSL 220
DD+W+R W+ C +P+N + +I + R KS+
Sbjct: 284 DDIWKRSAWKTIQCAFPINKHASRIITTTRIKSV 317
>03_06_0003 + 30921197-30921388,30921514-30921632,30921742-30921811,
30922078-30922161,30922258-30922344,30922431-30922501,
30922648-30922702,30923374-30923509,30925009-30925103,
30925203-30925357,30925435-30925543,30925761-30925817,
30925913-30926027,30926177-30926264,30926738-30927501,
30927600-30927688,30928315-30928422,30928550-30928657,
30928887-30928977,30929235-30929287,30929557-30929712,
30930763-30930825,30931491-30931535,30932075-30932130,
30933051-30933132,30933238-30933354,30933428-30933530,
30933912-30934062,30934180-30934417,30934564-30934764,
30934850-30934935,30935036-30935135
Length = 1347
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +3
Query: 264 ATGNHTDASEAVAKHHRFDSSNGRGHGAKVVVPTEPGVRDAVXSGP 401
A N TDA EAV + D +G + VP PGV + + P
Sbjct: 1256 AGSNRTDALEAVRELFSGDGQTKKGRKGQNEVPLPPGVHHRLTTSP 1301
>11_01_0560 - 4413174-4414469
Length = 431
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 357 VPTEPGVRDAVXSGPATTTCGVRVPCRTSPRNDTTTCPS 473
+PT PGVR A + P T + +P + TT PS
Sbjct: 219 LPTLPGVRSATPTAPPATPFRLEWDHAAAPSSSATTTPS 257
>09_02_0362 +
7860088-7860197,7861606-7861636,7861738-7861801,
7861922-7862052,7863575-7863784,7863891-7863956,
7864868-7865075,7866270-7866325,7866406-7867128,
7868246-7868299,7868667-7868695,7869501-7869585,
7870032-7870202,7870246-7870827
Length = 839
Score = 29.5 bits (63), Expect = 2.7
Identities = 22/101 (21%), Positives = 48/101 (47%)
Frame = +1
Query: 205 PVSASKRFETQTIYKNSIYRPRATIPTPVKPSPNIIASTAQMEGDTVQKLSYLPNPVCVT 384
P+ ++ F T N + + +++ +P SP++I+ + D+VQ+ L NP +
Sbjct: 299 PMVSAPAFSHVTPVANGVSQGLSSVQSP---SPSLISQETNLANDSVQEHKPLINP--IQ 353
Query: 385 QSXPALPPRHVGSGSHAEHHHATTRLRAQAVCTPGVVQTGS 507
QS P +V ++ H + + + + PG+ +G+
Sbjct: 354 QSIRPGGPANVSILNNLSQHRSVATIISGGM--PGIPMSGT 392
>07_03_1160 - 24430240-24431268
Length = 342
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +1
Query: 265 PRATIPTPVKPSPNIIASTAQMEGDTVQKLSYLPNPVCVTQSXPALPP 408
P+ P P+ P+P+++ + Q + LPNP + P +PP
Sbjct: 43 PKPDQPPPLLPTPDVVPNPNQPPLQPTPGVPPLPNPDVPPMNKPDVPP 90
>12_01_0748 -
6728221-6728305,6728788-6728842,6729202-6729289,
6729681-6729818,6729978-6730142,6730235-6730354,
6730555-6730631,6730738-6731113,6731523-6732617
Length = 732
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/76 (23%), Positives = 36/76 (47%)
Frame = +3
Query: 105 LSKVGRKYDIHNELLGREKRLSSTTHLTDCLLQPCLRFEEI*NADYL*EQYLPATGNHTD 284
+ + G K ++N G+ + + + + D +L+ R + + N Y A NH
Sbjct: 253 IKRRGNKKRMNNHPGGKTSPVPTNSSILDSVLEGFARLQNL-NGKY-------ALANHKS 304
Query: 285 ASEAVAKHHRFDSSNG 332
+ ++V + H +DS NG
Sbjct: 305 SGDSVKQTHGYDSPNG 320
>07_03_0759 -
21299502-21299807,21299889-21300039,21300151-21300388,
21300729-21300939,21301018-21301133,21301388-21301519,
21302179-21303073
Length = 682
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 187 PTACSNPVSASKRFETQTIYKNSIYRPRATIPTPVKPSPNIIASTAQMEGDTVQKL 354
P +P SAS R+ + ++ ++ R AT+P SP + A+ A GD K+
Sbjct: 36 PWYLCDPYSASGRYSENSTFQANVNRLSATLPRNTSSSPAMYATGA--AGDVPDKV 89
>05_07_0145 +
28012268-28012624,28012734-28012794,28013758-28013852,
28013944-28014056,28014436-28014604,28014677-28014716,
28014797-28014861,28015485-28015598,28015687-28015751,
28015927-28016083,28016167-28016286,28016447-28016535,
28016631-28016715
Length = 509
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 315 FDSSNGRGHGAKVVVPTEPGVRDAVXSGPATTTCGVRV 428
FD +G G K VV E G + + SGP C + V
Sbjct: 353 FDGKHGVSAGIKSVVDDEAGESNGLQSGPMCNACEMAV 390
>01_06_0217 - 27624588-27625817,27626203-27626484,27626582-27626692
Length = 540
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +1
Query: 280 PTPVKPSPNIIASTAQMEGDTVQKLSYLPNPVCVTQSXPALPPRHVGSGSHAEHH 444
P P KP+ +AS A ++G + NP + A+ P+H SG A HH
Sbjct: 422 PQPSKPNHCSVASYA-VQGSGQSYSATFKNPSNCAATVVAVLPQHPASGPMAFHH 475
>05_01_0248 -
1864092-1864204,1864570-1864608,1864661-1864730,
1864976-1865043,1866114-1866201,1866282-1866309,
1866406-1866451,1866571-1866796
Length = 225
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
Frame = +3
Query: 402 ATTTCGV----RVPCRTSPRNDTTTCPSRLYSGSRSNRLTVPLR 521
A +CGV P P TTT SRL SRS L PLR
Sbjct: 10 AAASCGVLRHHHPPASPRPPPTTTTTTSRLLLASRSRGLQRPLR 53
>01_03_0117 +
12684729-12685886,12685978-12686145,12686292-12686336,
12686438-12687280
Length = 737
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/62 (27%), Positives = 26/62 (41%)
Frame = +1
Query: 265 PRATIPTPVKPSPNIIASTAQMEGDTVQKLSYLPNPVCVTQSXPALPPRHVGSGSHAEHH 444
P ++ P K + A T M L P ++ PA PP+ + +H+ HH
Sbjct: 132 PSPSLSPPAKAPSHSHAKTPSMPPAERPALPPTKAPAAIS---PATPPQLSPANAHSTHH 188
Query: 445 HA 450
HA
Sbjct: 189 HA 190
>03_04_0071 + 17048222-17048227,17048348-17048601,17048679-17048940
Length = 173
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -1
Query: 496 ERLPEYRRLGHVVVSLRGDVLHGTLTPHVVVAGPXSTASRTP-GSVGTT 353
E PE RRL VVV + P + P ASRTP G++ T
Sbjct: 14 EHAPERRRLDIVVVRPFSSIPKQAAVPRISPRPPLQDASRTPAGNIKNT 62
>01_06_0552 +
30166699-30166797,30167094-30167562,30171536-30171879,
30172006-30172302
Length = 402
Score = 28.3 bits (60), Expect = 6.2
Identities = 29/119 (24%), Positives = 50/119 (42%), Gaps = 13/119 (10%)
Frame = +1
Query: 112 KLDGNTTYTMSYLDAKSDCRRQPILPTACSN--------PVSASKRFETQTIYKNSIYRP 267
+ DGNT +T D ++ C R+ ++ + P +A+ + K+S+ +
Sbjct: 106 RYDGNTRFTAMVFD-RTACEREDLMGGGGGDRPRKKRGRPRTAAASRDAARPKKDSVGKE 164
Query: 268 RATI---PTPVKPSPNIIASTAQMEGDTVQKLSYLPN--PVCVTQSXPALPPRHVGSGS 429
T P+ +P + +S G T K + PVC + A PPRHV G+
Sbjct: 165 MVTYRASPSGGQPLQIVDSSWTPEPGSTAVKNEEDADELPVCELPASSASPPRHVPEGA 223
>07_03_0965 - 22996575-22999112,22999202-22999636,22999717-22999801,
22999888-22999957,23000050-23000293,23000396-23000482,
23000655-23000706,23000830-23001226,23001324-23001648,
23001748-23001914,23002007-23002547
Length = 1646
Score = 27.9 bits (59), Expect = 8.1
Identities = 24/89 (26%), Positives = 35/89 (39%)
Frame = +1
Query: 178 PILPTACSNPVSASKRFETQTIYKNSIYRPRATIPTPVKPSPNIIASTAQMEGDTVQKLS 357
P+ + SN VS S P +P+P + S AST+ + S
Sbjct: 1387 PVASGSPSNSVSKSTGGSPPASGSAKGVPPAVQLPSPQQQSAKNPASTSGAKSAPTNHYS 1446
Query: 358 YLPNPVCVTQSXPALPPRHVGSGSHAEHH 444
+P P + Q P +PP SGS + H
Sbjct: 1447 SMPMPSILGQQ-PNVPPGS-NSGSKQQSH 1473
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,292,746
Number of Sequences: 37544
Number of extensions: 516144
Number of successful extensions: 1619
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1617
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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