Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0466
(697 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.39
SB_40587| Best HMM Match : DEP (HMM E-Value=7.4e-16) 32 0.51
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 31 1.2
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 31 1.2
SB_53064| Best HMM Match : Hexapep (HMM E-Value=2.7e-07) 31 1.2
SB_3699| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_9260| Best HMM Match : EPSP_synthase (HMM E-Value=0) 30 2.1
SB_51861| Best HMM Match : RVT_1 (HMM E-Value=1.2e-10) 29 2.7
SB_35734| Best HMM Match : Extensin_2 (HMM E-Value=0.52) 29 2.7
SB_52231| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_17426| Best HMM Match : DUF292 (HMM E-Value=0) 29 3.6
SB_52513| Best HMM Match : MAGP (HMM E-Value=0.12) 29 4.8
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_27357| Best HMM Match : MFMR (HMM E-Value=3.2) 29 4.8
SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_50714| Best HMM Match : TPR_2 (HMM E-Value=2.9e-15) 28 6.3
SB_52387| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_42812| Best HMM Match : RVT_1 (HMM E-Value=8.4e-19) 28 6.3
SB_32226| Best HMM Match : PID (HMM E-Value=3.9e-30) 28 6.3
SB_5376| Best HMM Match : EGF_CA (HMM E-Value=0) 28 6.3
SB_24809| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_14411| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
>SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1417
Score = 32.3 bits (70), Expect = 0.39
Identities = 33/131 (25%), Positives = 50/131 (38%), Gaps = 1/131 (0%)
Frame = +1
Query: 121 GNTTYTMSYLDAKSDCRRQPILPTACSNPVSASKRFETQTIYKNSIYRPRATIPTPVKPS 300
G+ + +SY K PI P+ + + K + K S P T TP+KPS
Sbjct: 1244 GSPSSLISYKPIKPSPSTTPIKPSPSTTSTTPIKPSPSTNPIKPS---PSTTSTTPIKPS 1300
Query: 301 PNIIASTAQMEGDTVQKLSYLPNPVCVTQS-XPALPPRHVGSGSHAEHHHATTRLRAQAV 477
P+ T K S P+ + S P P S + + +TT ++
Sbjct: 1301 PS-TTPIKPSPSTTPIKPSPSTTPIKPSPSTTPIKPSPSTTSTTPIKPSPSTTPIKPSPS 1359
Query: 478 CTPGVVQTGSQ 510
TPGV G +
Sbjct: 1360 TTPGVHDRGDR 1370
>SB_40587| Best HMM Match : DEP (HMM E-Value=7.4e-16)
Length = 625
Score = 31.9 bits (69), Expect = 0.51
Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 5/120 (4%)
Frame = +1
Query: 178 PILPTACSNPVSASKRFETQTIYKNSIYRPRATIPTPVKPSPNIIASTAQMEGDTVQKLS 357
P+ S P S E + ++ +PRA TPV SPNI+ S + +S
Sbjct: 382 PVALKTSSKPSSTDSSLEKEA----TVLQPRAR--TPVNQSPNILKSLFNKLSGKISGVS 435
Query: 358 YLPNPVCVTQ----SXPAL-PPRHVGSGSHAEHHHATTRLRAQAVCTPGVVQTGSQYHCV 522
+ + S PA+ PR +G A+ H + R Q C + + G+ CV
Sbjct: 436 LSSSQDSSSSESQVSHPAIETPRQLGFQLSADDHRSFDH-RLQLYCEVSLFKEGTDEKCV 494
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/59 (32%), Positives = 25/59 (42%)
Frame = +1
Query: 253 SIYRPRATIPTPVKPSPNIIASTAQMEGDTVQKLSYLPNPVCVTQSXPALPPRHVGSGS 429
S++ P + +PTPV P + V + P PV T S P PP SGS
Sbjct: 544 SVFAPSSGVPTPVTAPPPAPPPSVFAPSSAVPTPATAPPPVAATLSAP--PPLDSTSGS 600
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 30.7 bits (66), Expect = 1.2
Identities = 26/88 (29%), Positives = 36/88 (40%)
Frame = +3
Query: 348 KVVVPTEPGVRDAVXSGPATTTCGVRVPCRTSPRNDTTTCPSRLYSGSRSNRLTVPLRRT 527
K T PG + P TTT P T+P TTT P + ++ T P T
Sbjct: 119 KPTTTTPPGT--TTPTKPTTTT----PPATTTPTKPTTTTPPATTTPTKPT-TTTPPATT 171
Query: 528 TV*KSDRESXVVFGPGTSAPTGIVCSRQ 611
T KS + T+ P ++CSR+
Sbjct: 172 TPTKSTTTTPPATTTPTTRPLLLLCSRR 199
>SB_53064| Best HMM Match : Hexapep (HMM E-Value=2.7e-07)
Length = 585
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = -1
Query: 580 LVPGPKTTXDSRSDFQTVVRRSGTVSRFERLPEYRRLGHVVVSLRGDVLHG-TLTPHVVV 404
+ PG + +S + T V R GT + LPE + V+ G T++P V
Sbjct: 291 ITPGTTESPESTAAPGTTVSREGTNTPDSLLPEGTTAPGTTFANESTVVSGTTISPESTV 350
Query: 403 AGPXSTASRTPGSVGTT 353
A + AS + + GTT
Sbjct: 351 APESTIASESSAAPGTT 367
>SB_3699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = -1
Query: 460 VVSLRGDVLHGTLTPHVVVAGPXSTASRTPGSVGTTTFAPCPLP 329
V SL G HG + P +VAG + A+ G T T PCP+P
Sbjct: 222 VSSLHG-ADHGVV-PDRIVAGTYAVAAVMTGGELTLTLGPCPVP 263
>SB_9260| Best HMM Match : EPSP_synthase (HMM E-Value=0)
Length = 465
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = -1
Query: 460 VVSLRGDVLHGTLTPHVVVAGPXSTASRTPGSVGTTTFAPCPLP 329
V SL G HG + P +VAG + A+ G T T PCP+P
Sbjct: 211 VSSLHG-ADHGVV-PDRIVAGTYAVAAVMTGGELTLTLGPCPVP 252
>SB_51861| Best HMM Match : RVT_1 (HMM E-Value=1.2e-10)
Length = 1318
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 172 RQPILPTACSNPVSASKRFETQTIYKNSIYRPRATIPTP-VKPSP 303
++P+LPT C+NP+ E Y N R P+P V+P P
Sbjct: 766 QRPMLPTTCNNPLRNGSIRELNKAYLNRCQREN---PSPVVQPKP 807
>SB_35734| Best HMM Match : Extensin_2 (HMM E-Value=0.52)
Length = 460
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 425 GPMQNITTQRHDYVPKPSVLRESFKPAH 508
GPM+N TT R DY K + +S KP +
Sbjct: 201 GPMENDTTTRLDYTKKQILPAQSAKPVY 228
>SB_52231| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 432
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +1
Query: 121 GNTTYTMSYLDAKSDCRRQPILPTACSNPVSASKRFETQTIYKNSIYRPRATIPTPVKPS 300
G TT+ S+LD + +R + NPVS + + + ++ ++ RPR P PS
Sbjct: 274 GKTTFLQSFLDRSPEIKRS---IRSLPNPVSYDYQMQREICHQINL-RPRLLRLQPSPPS 329
Query: 301 P 303
P
Sbjct: 330 P 330
>SB_17426| Best HMM Match : DUF292 (HMM E-Value=0)
Length = 249
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/57 (22%), Positives = 24/57 (42%)
Frame = +1
Query: 250 NSIYRPRATIPTPVKPSPNIIASTAQMEGDTVQKLSYLPNPVCVTQSXPALPPRHVG 420
N PR + KP P I+ +E + + P+P+ + ++PP + G
Sbjct: 141 NDTVNPRLILKLSPKPPPKILVERYLIEIARSHNVQFEPDPLVMLTQPASMPPAYPG 197
>SB_52513| Best HMM Match : MAGP (HMM E-Value=0.12)
Length = 1020
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +1
Query: 169 RRQPILPTACSNPVSASKRFETQTIYKNSIYRPRATIPTPVKPSPN 306
R PI P+ + P+ S + T K S P T TP+KPSPN
Sbjct: 333 RTTPIKPSPSTTPIKPSP---STTPIKPS---PSTTSTTPIKPSPN 372
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +1
Query: 262 RPRATIPTPVKPSPNIIASTAQMEGDTVQKLSYLPNPVCVTQSXP 396
+P T TP KPSP STA + P+P TQ+ P
Sbjct: 28 KPTPTTHTPTKPSPTTPTSTAPTQ---TTPTPTTPSPTAPTQTTP 69
>SB_27357| Best HMM Match : MFMR (HMM E-Value=3.2)
Length = 468
Score = 28.7 bits (61), Expect = 4.8
Identities = 21/57 (36%), Positives = 23/57 (40%)
Frame = +1
Query: 265 PRATIPTPVKPSPNIIASTAQMEGDTVQKLSYLPNPVCVTQSXPALPPRHVGSGSHA 435
PR PT +PS T M G + S L PV V Q P HV G HA
Sbjct: 174 PRIPTPTSCQPSTISPGGTPYMYGGPYR--SALTYPVLVQQKRLDRSPCHVTMGPHA 228
>SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +1
Query: 427 SHAEHHHATTRL---RAQAVCTPGVVQTGSQYHCVEQPF 534
++ +H A +L A +C G+VQT SQ + +++PF
Sbjct: 239 NNVQHVKAPAKLDLKHAVNICNSGMVQTNSQTNSIDEPF 277
>SB_50714| Best HMM Match : TPR_2 (HMM E-Value=2.9e-15)
Length = 458
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 431 MQNITTQRHDYVPKPSVLRESFKPAHSTTASNNRLK 538
M + T +HD KP+ KPAH+ T + N+ K
Sbjct: 53 MASKLTSKHDRSSKPNTTHIYGKPAHNLTEARNKEK 88
>SB_52387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1088
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +1
Query: 418 GSGSHAEHHHATTRLRAQAVCTPGVVQTGSQYHCVEQPFENR 543
G G H A L +C +++ GSQY E+ +N+
Sbjct: 581 GEGLAKTRHIALATLETYEICDIWMIKAGSQYEASEEQAQNK 622
>SB_42812| Best HMM Match : RVT_1 (HMM E-Value=8.4e-19)
Length = 769
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/71 (29%), Positives = 27/71 (38%)
Frame = -1
Query: 607 REHTIPVGALVPGPKTTXDSRSDFQTVVRRSGTVSRFERLPEYRRLGHVVVSLRGDVLHG 428
R+ P+ LVP P R Q V R R + R GH + L+G
Sbjct: 606 RQIRTPIDILVPSPAHRAQGRQSKQAVKAAQRLAGRQGRRYKVRPPGHQITKLQGT---R 662
Query: 427 TLTPHVVVAGP 395
+T VV GP
Sbjct: 663 CVTVRVVPRGP 673
>SB_32226| Best HMM Match : PID (HMM E-Value=3.9e-30)
Length = 591
Score = 28.3 bits (60), Expect = 6.3
Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Frame = +3
Query: 177 THLTDCLLQPCLRFEEI*NADYL*EQYLPAT-GNHTDASEAVAKHHRFDSSNGRGHGAKV 353
+H C CL+ ++ A L +Q A G TD ++A + ++ + A V
Sbjct: 225 SHAVGCAFTACLQRKQ--KAQALQQQAKAAKEGEKTDGTQATSTAPSTVANQQQSSRAFV 282
Query: 354 VVPTEPGVRDAVXSGPATTTCGVRVPCRTSPRNDTT 461
P+ +V +GP T+ P T+P TT
Sbjct: 283 STPSSVTSASSVVNGPTETSGMTSSPSSTAPVVTTT 318
>SB_5376| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1705
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 4/91 (4%)
Frame = +1
Query: 265 PRATIPTPVKPSPNIIASTAQM----EGDTVQKLSYLPNPVCVTQSXPALPPRHVGSGSH 432
P PTP P+P ++++ M E +L+++ C T AL P H +
Sbjct: 536 PTTATPTPTAPTPRVLSTALAMWDIQETVYTAQLTFIDINECKT---TALAPYHSHYAHN 592
Query: 433 AEHHHATTRLRAQAVCTPGVVQTGSQYHCVE 525
T + CT V +G C++
Sbjct: 593 CHSDANCTNTKGSFYCTCHVGYSGDGVTCLD 623
>SB_24809| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 780
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -1
Query: 445 GDVLHGTLTPHVVVAGPXSTASRTPGSVGTTTFAPCPLPFEL 320
GD L GT + + T +R P S T PLP +L
Sbjct: 723 GDTLIGTSRDNKPIVPSGDTLTRIPSSAAIRTSTAIPLPMDL 764
>SB_14411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 475
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2
Query: 110 KSWTEIRHTQ*VTWTRKATVVDNPSYRLLAPTLSP 214
KSW++ T T A PS+R LAP LSP
Sbjct: 46 KSWSQCGLLSCPTTTSPAKRRKTPSWRTLAPALSP 80
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,262,512
Number of Sequences: 59808
Number of extensions: 588208
Number of successful extensions: 1847
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1838
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1817559367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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