Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0465
         (625 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    25   0.60 
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   2.4  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   2.4  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    23   3.2  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   4.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   4.2  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          22   4.2  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   7.4  

>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -3

Query: 86  NLLIKETNSLL*IMYICHYY 27
           N LI+E++S++   Y CH+Y
Sbjct: 178 NRLIEESSSVMEAAYSCHWY 197


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = +3

Query: 333 FDNSVQIIDAKKGKNVLKRVQL--PPLNLDMLQIGN 434
           F N  QI+D K   NV K++ +     N D+  I N
Sbjct: 508 FSNEEQIVDLKAFNNVPKKLNMFYNNFNSDIKSISN 543


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = +3

Query: 333 FDNSVQIIDAKKGKNVLKRVQL--PPLNLDMLQIGN 434
           F N  QI+D K   NV K++ +     N D+  I N
Sbjct: 508 FSNEEQIVDLKAFNNVPKKLNMFYNNFNSDIKSISN 543


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 618 LPFSIRTMRKSFFMMNVIILPCXL 547
           + + IR  R+  F +  +ILPC L
Sbjct: 203 ITYEIRLRRRPMFYVFNLILPCIL 226


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 11/40 (27%), Positives = 17/40 (42%)
 Frame = -1

Query: 622 NFAVFHSNDAKIIFHDECDYFTMXTWSYRLNHGKCTWHFL 503
           +F    +N   I  H +     +    YRLNH   T+H +
Sbjct: 464 HFESMLNNGVSIQSHAKAKNTMIKARQYRLNHKPFTYHIV 503


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 11/40 (27%), Positives = 17/40 (42%)
 Frame = -1

Query: 622 NFAVFHSNDAKIIFHDECDYFTMXTWSYRLNHGKCTWHFL 503
           +F    +N   I  H +     +    YRLNH   T+H +
Sbjct: 464 HFESMLNNGVSIQSHAKAKNTMIKARQYRLNHKPFTYHIV 503


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 11/40 (27%), Positives = 17/40 (42%)
 Frame = -1

Query: 622 NFAVFHSNDAKIIFHDECDYFTMXTWSYRLNHGKCTWHFL 503
           +F    +N   I  H +     +    YRLNH   T+H +
Sbjct: 90  HFESMLNNGVSIQSHAKAKNTMIKARQYRLNHKPFTYHIV 129


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 538 RLNHGKCTWHF 506
           RL+HG+ TW F
Sbjct: 515 RLDHGRKTWTF 525


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,607
Number of Sequences: 438
Number of extensions: 3164
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)