Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0463
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      28   0.058
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      28   0.058
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   2.2  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    23   2.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.9  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   5.0  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   5.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   5.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   5.0  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   6.6  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    21   8.7  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 28.3 bits (60), Expect = 0.058
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +3

Query: 105 KRPATAFMLWLNENRKKIIEENPGIKVTEVAKRAGELWRDL 227
           K+P  AFML++ E R K++ E    +   + +  G  W  L
Sbjct: 480 KKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHAL 520


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 28.3 bits (60), Expect = 0.058
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +3

Query: 105 KRPATAFMLWLNENRKKIIEENPGIKVTEVAKRAGELWRDL 227
           K+P  AFML++ E R K++ E    +   + +  G  W  L
Sbjct: 372 KKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHAL 412


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = -1

Query: 276 YSSFALLVSLPIPICLSGPSRVLPRAWRPL 187
           Y SFALL++  + +CL G ++V   + +PL
Sbjct: 321 YWSFALLITRIVCLCLFG-AKVHDESIKPL 349


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 270 SFALLVSLPIPICLSGPS 217
           SFALL+   I +CL G S
Sbjct: 200 SFALLIMRLISVCLCGAS 217


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 301 FILLHCGIVFFFRFVGFSSH 242
           FI+L C   F++ F+ F+ H
Sbjct: 107 FIILLCVYYFYYAFIIFTVH 126


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 248 FPFRFVFQVPPEFSRALGDL 189
           FPFR   ++PPE    + DL
Sbjct: 210 FPFRKTTEIPPEPEDYVEDL 229


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 270 SFALLVSLPIPICLSG 223
           SFA  ++L +P+ LSG
Sbjct: 161 SFAFPINLSVPVLLSG 176


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 270 SFALLVSLPIPICLSG 223
           SFA  ++L +P+ LSG
Sbjct: 394 SFAFPINLSVPVLLSG 409


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 270 SFALLVSLPIPICLSG 223
           SFA  ++L +P+ LSG
Sbjct: 394 SFAFPINLSVPVLLSG 409


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 213 LWRDLKDKSEWEEKPTKR 266
           L+RD    S W  +P KR
Sbjct: 27  LYRDCTTASSWPGRPPKR 44


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +3

Query: 96  NAPKRPATAFMLWLNENRK 152
           NA +        WLNE++K
Sbjct: 90  NATRESTATLKAWLNEHKK 108


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,910
Number of Sequences: 336
Number of extensions: 1352
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)