Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0462
         (537 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U55366-1|AAA97980.2|  430|Caenorhabditis elegans Suppressor of c...    29   2.1  
AF419335-1|AAL15971.1|  430|Caenorhabditis elegans multisubstrat...    29   2.1  
M98552-4|AAP68923.1| 1353|Caenorhabditis elegans Hypothetical pr...    28   3.7  
M98552-3|AAP68922.1| 1342|Caenorhabditis elegans Hypothetical pr...    28   3.7  
U66261-1|AAB07022.1| 1525|Caenorhabditis elegans multidrug resis...    27   6.5  
U41554-4|AAA83299.2| 1525|Caenorhabditis elegans Multidrug resis...    27   6.5  
AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical...    27   6.5  
Z82282-2|CAB05274.2|  544|Caenorhabditis elegans Hypothetical pr...    27   8.6  
Z82054-4|CAB04842.1|  453|Caenorhabditis elegans Hypothetical pr...    27   8.6  
Z82054-1|CAB04840.1|  453|Caenorhabditis elegans Hypothetical pr...    27   8.6  
Z81109-18|CAB03255.1|  453|Caenorhabditis elegans Hypothetical p...    27   8.6  
U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical pr...    27   8.6  
U50301-2|AAM29675.1|  362|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>U55366-1|AAA97980.2|  430|Caenorhabditis elegans Suppressor of clr
           protein 1 protein.
          Length = 430

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +3

Query: 273 TLSPFPSDAPLTSMDVERALSFAPRRGTA 359
           T SP PSD    S+DV+R L+F   R  A
Sbjct: 398 TRSPTPSDIEYISVDVDRTLAFKQMRRAA 426


>AF419335-1|AAL15971.1|  430|Caenorhabditis elegans multisubstrate
           adaptor proteinSOC-1 protein.
          Length = 430

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +3

Query: 273 TLSPFPSDAPLTSMDVERALSFAPRRGTA 359
           T SP PSD    S+DV+R L+F   R  A
Sbjct: 398 TRSPTPSDIEYISVDVDRTLAFKQMRRAA 426


>M98552-4|AAP68923.1| 1353|Caenorhabditis elegans Hypothetical protein
            ZK370.4b protein.
          Length = 1353

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +2

Query: 329  VELRSASWHRGLQELWR 379
            VE R+ASW  G+  LWR
Sbjct: 993  VETRAASWFNGMSSLWR 1009


>M98552-3|AAP68922.1| 1342|Caenorhabditis elegans Hypothetical protein
            ZK370.4a protein.
          Length = 1342

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +2

Query: 329  VELRSASWHRGLQELWR 379
            VE R+ASW  G+  LWR
Sbjct: 982  VETRAASWFNGMSSLWR 998


>U66261-1|AAB07022.1| 1525|Caenorhabditis elegans multidrug resistance
            related protein2 protein.
          Length = 1525

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
 Frame = -3

Query: 304  RGASLGNGDSVTSNAHRVLXWVW-----RLTDHLTTASNGSDSSSRGTEYS 167
            R AS+G+G        R L  V      RL  HL+  S+  D+S+R  EYS
Sbjct: 850  RVASIGDGSGEVDEILRDLGQVKPGILKRLESHLSQESDKEDTSARAIEYS 900


>U41554-4|AAA83299.2| 1525|Caenorhabditis elegans Multidrug resistance
            protein familyprotein 2 protein.
          Length = 1525

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
 Frame = -3

Query: 304  RGASLGNGDSVTSNAHRVLXWVW-----RLTDHLTTASNGSDSSSRGTEYS 167
            R AS+G+G        R L  V      RL  HL+  S+  D+S+R  EYS
Sbjct: 850  RVASIGDGSGEVDEILRDLGQVKPGILKRLESHLSQESDKEDTSARAIEYS 900


>AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical
            protein F15E6.1 protein.
          Length = 1655

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 16/58 (27%), Positives = 28/58 (48%)
 Frame = -1

Query: 450  EQRVTILSGQSPTFPNIRTTTANSLQSS*RPRCHDAERSSTRALRPYSSEERRSGTET 277
            E+R  +L+GQSP F  +R       +   R R  +A++   +A+     E R+   +T
Sbjct: 1383 EERSGLLAGQSPDFSEVRAQIEEENRMKERSRKREAKK---KAVEKEKKEHRKEPKKT 1437


>Z82282-2|CAB05274.2|  544|Caenorhabditis elegans Hypothetical
           protein T07G12.2 protein.
          Length = 544

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = +3

Query: 264 FEVTLSPFPSDAPLTSMDVERALSFAPRRGTAVFKSSGGCSLSWFGCWEMSAT 422
           F V L  F    P  SM+ ++A   A  +  + F    G  ++WF CW ++ T
Sbjct: 188 FVVLLEEFEVPMPAFSME-KKAFYTAKMKIFSQFPYLLGIMIAWFVCWILTIT 239


>Z82054-4|CAB04842.1|  453|Caenorhabditis elegans Hypothetical
           protein R10D12.15 protein.
          Length = 453

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = -3

Query: 502 SRFLISVYLTRKTKNTVRTASYNIKRPVADISQHPNHDSEQPPELLKTAVPRRGA 338
           SR+      +    NTV TA  N KR +A    H   ++ +    L TA+P + A
Sbjct: 103 SRYFPEFGTSLNVNNTVYTADENKKRDLAAFFAHAIQETGENNNYLYTALPDQEA 157


>Z82054-1|CAB04840.1|  453|Caenorhabditis elegans Hypothetical
           protein T26F2.1 protein.
          Length = 453

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = -3

Query: 502 SRFLISVYLTRKTKNTVRTASYNIKRPVADISQHPNHDSEQPPELLKTAVPRRGA 338
           SR+      +    NTV TA  N KR +A    H   ++ +    L TA+P + A
Sbjct: 103 SRYFPEFGTSLNVNNTVYTADENKKRDLAAFFAHAIQETGENNNYLYTALPDQEA 157


>Z81109-18|CAB03255.1|  453|Caenorhabditis elegans Hypothetical
           protein R10D12.15 protein.
          Length = 453

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = -3

Query: 502 SRFLISVYLTRKTKNTVRTASYNIKRPVADISQHPNHDSEQPPELLKTAVPRRGA 338
           SR+      +    NTV TA  N KR +A    H   ++ +    L TA+P + A
Sbjct: 103 SRYFPEFGTSLNVNNTVYTADENKKRDLAAFFAHAIQETGENNNYLYTALPDQEA 157


>U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical protein
            F41H10.3b protein.
          Length = 1005

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = -1

Query: 468  KRKTPFEQRVTILSGQSPTFPNIRTTTANSLQSS*RPRCHDAERSSTRALRPY-SSEERR 292
            +R  P  +   +L+  + T P ++    NS QS  RPR       ++ A  P  ++ +RR
Sbjct: 931  RRWDPLPKSSGVLAHSNSTIPYVQRVPNNSTQSDFRPRSFSQNSVASPAPAPVPNAIKRR 990

Query: 291  SG 286
             G
Sbjct: 991  EG 992


>U50301-2|AAM29675.1|  362|Caenorhabditis elegans Hypothetical
           protein F20D6.5 protein.
          Length = 362

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +2

Query: 290 ERRSSDEYGRRARVELRSASWHRGLQELWRLFAVVV 397
           E+     Y  RA V+ +S +W    Q+L RLF   +
Sbjct: 244 EKHCDGSYKFRAIVDFQSVNWGNAAQDLSRLFVTAM 279


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,046,172
Number of Sequences: 27780
Number of extensions: 191689
Number of successful extensions: 602
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 602
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)