Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0460
         (331 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061396-1|AAL28944.1|  137|Drosophila melanogaster LD32106p pro...   161   3e-40
AE014296-1681|AAF50250.1|  137|Drosophila melanogaster CG3395-PB...   161   3e-40
AE014296-1680|AAN11946.1|  195|Drosophila melanogaster CG3395-PD...   161   3e-40
AE014296-1679|AAF50249.1|  195|Drosophila melanogaster CG3395-PA...   161   3e-40
X69677-1|CAB41492.1|  197|Drosophila melanogaster ribosomal prot...   134   2e-32
BT010081-1|AAQ22550.1|  524|Drosophila melanogaster LD07278p pro...    27   5.7  
AE014298-689|AAF45992.1|  524|Drosophila melanogaster CG6927-PA ...    27   5.7  

>AY061396-1|AAL28944.1|  137|Drosophila melanogaster LD32106p
           protein.
          Length = 137

 Score =  161 bits (390), Expect = 3e-40
 Identities = 76/85 (89%), Positives = 81/85 (95%)
 Frame = +2

Query: 2   MVNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARE 181
           MVN R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAARE
Sbjct: 1   MVNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARE 60

Query: 182 LLTLXEKDPKRLFEGNALLRRLVRM 256
           LLTL EKD KRLF+GNALLRRLVR+
Sbjct: 61  LLTLDEKDEKRLFQGNALLRRLVRI 85



 Score = 40.7 bits (91), Expect = 4e-04
 Identities = 19/25 (76%), Positives = 20/25 (80%)
 Frame = +1

Query: 256 GVLDEKQMKLXYXLGLKNEDFLXRR 330
           GVLDE +MKL Y LGLK EDFL RR
Sbjct: 86  GVLDESRMKLDYVLGLKIEDFLERR 110


>AE014296-1681|AAF50250.1|  137|Drosophila melanogaster CG3395-PB,
           isoform B protein.
          Length = 137

 Score =  161 bits (390), Expect = 3e-40
 Identities = 76/85 (89%), Positives = 81/85 (95%)
 Frame = +2

Query: 2   MVNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARE 181
           MVN R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAARE
Sbjct: 1   MVNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARE 60

Query: 182 LLTLXEKDPKRLFEGNALLRRLVRM 256
           LLTL EKD KRLF+GNALLRRLVR+
Sbjct: 61  LLTLDEKDEKRLFQGNALLRRLVRI 85



 Score = 40.7 bits (91), Expect = 4e-04
 Identities = 19/25 (76%), Positives = 20/25 (80%)
 Frame = +1

Query: 256 GVLDEKQMKLXYXLGLKNEDFLXRR 330
           GVLDE +MKL Y LGLK EDFL RR
Sbjct: 86  GVLDESRMKLDYVLGLKIEDFLERR 110


>AE014296-1680|AAN11946.1|  195|Drosophila melanogaster CG3395-PD,
           isoform D protein.
          Length = 195

 Score =  161 bits (390), Expect = 3e-40
 Identities = 76/85 (89%), Positives = 81/85 (95%)
 Frame = +2

Query: 2   MVNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARE 181
           MVN R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAARE
Sbjct: 1   MVNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARE 60

Query: 182 LLTLXEKDPKRLFEGNALLRRLVRM 256
           LLTL EKD KRLF+GNALLRRLVR+
Sbjct: 61  LLTLDEKDEKRLFQGNALLRRLVRI 85



 Score = 40.7 bits (91), Expect = 4e-04
 Identities = 19/25 (76%), Positives = 20/25 (80%)
 Frame = +1

Query: 256 GVLDEKQMKLXYXLGLKNEDFLXRR 330
           GVLDE +MKL Y LGLK EDFL RR
Sbjct: 86  GVLDESRMKLDYVLGLKIEDFLERR 110


>AE014296-1679|AAF50249.1|  195|Drosophila melanogaster CG3395-PA,
           isoform A protein.
          Length = 195

 Score =  161 bits (390), Expect = 3e-40
 Identities = 76/85 (89%), Positives = 81/85 (95%)
 Frame = +2

Query: 2   MVNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARE 181
           MVN R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAARE
Sbjct: 1   MVNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARE 60

Query: 182 LLTLXEKDPKRLFEGNALLRRLVRM 256
           LLTL EKD KRLF+GNALLRRLVR+
Sbjct: 61  LLTLDEKDEKRLFQGNALLRRLVRI 85



 Score = 40.7 bits (91), Expect = 4e-04
 Identities = 19/25 (76%), Positives = 20/25 (80%)
 Frame = +1

Query: 256 GVLDEKQMKLXYXLGLKNEDFLXRR 330
           GVLDE +MKL Y LGLK EDFL RR
Sbjct: 86  GVLDESRMKLDYVLGLKIEDFLERR 110


>X69677-1|CAB41492.1|  197|Drosophila melanogaster ribosomal protein
           protein.
          Length = 197

 Score =  134 bits (325), Expect = 2e-32
 Identities = 66/85 (77%), Positives = 74/85 (87%)
 Frame = +2

Query: 2   MVNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARE 181
           MVN R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGL+  R V  VKY LA+IRK ARE
Sbjct: 1   MVNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLQQARSV-AVKYALAKIRKVARE 59

Query: 182 LLTLXEKDPKRLFEGNALLRRLVRM 256
           LLTL EKD KRLF+G +L+RRLVR+
Sbjct: 60  LLTLDEKDAKRLFQGKSLVRRLVRI 84


>BT010081-1|AAQ22550.1|  524|Drosophila melanogaster LD07278p
           protein.
          Length = 524

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 19/64 (29%), Positives = 30/64 (46%)
 Frame = +2

Query: 14  RVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTL 193
           ++ ++    Y+ PR  F      +   I+GE  LRN   +W     LA  R ++  +L L
Sbjct: 89  KIYALLQMRYLDPRLNFRNVSPKRRQPILGEEHLRN--SLWMPHIFLANERDSS--ILGL 144

Query: 194 XEKD 205
            EKD
Sbjct: 145 TEKD 148


>AE014298-689|AAF45992.1|  524|Drosophila melanogaster CG6927-PA
           protein.
          Length = 524

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 19/64 (29%), Positives = 30/64 (46%)
 Frame = +2

Query: 14  RVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTL 193
           ++ ++    Y+ PR  F      +   I+GE  LRN   +W     LA  R ++  +L L
Sbjct: 89  KIYALLQMRYLDPRLNFRNVSPKRRQPILGEEHLRN--SLWMPHIFLANERDSS--ILGL 144

Query: 194 XEKD 205
            EKD
Sbjct: 145 TEKD 148


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,535,311
Number of Sequences: 53049
Number of extensions: 220419
Number of successful extensions: 458
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 457
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 714329562
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)