Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0458
(659 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051621-1|AAK93045.1| 611|Drosophila melanogaster GH26702p pro... 39 0.005
AE014296-942|AAF50789.1| 611|Drosophila melanogaster CG4669-PA ... 39 0.005
AE013599-2559|AAF57791.1| 649|Drosophila melanogaster CG18635-P... 31 1.8
AY052009-1|AAK93433.1| 385|Drosophila melanogaster LD47223p pro... 29 4.2
AE014297-2024|AAF55181.2| 385|Drosophila melanogaster CG5044-PA... 29 4.2
AE014297-2023|AAN13658.2| 386|Drosophila melanogaster CG5044-PB... 29 4.2
AE014296-3523|AAF51713.2| 1737|Drosophila melanogaster CG32436-P... 29 4.2
DQ398892-1|ABD61608.1| 2043|Drosophila melanogaster Dicer-1 prot... 28 9.8
DQ398891-1|ABD61607.1| 2043|Drosophila melanogaster Dicer-1 prot... 28 9.8
DQ398889-1|ABD61605.1| 2043|Drosophila melanogaster Dicer-1 prot... 28 9.8
DQ398888-1|ABD61604.1| 2043|Drosophila melanogaster Dicer-1 prot... 28 9.8
DQ398887-1|ABD61603.1| 2043|Drosophila melanogaster Dicer-1 prot... 28 9.8
DQ398886-1|ABD61602.1| 2043|Drosophila melanogaster Dicer-1 prot... 28 9.8
DQ398885-1|ABD61601.1| 2043|Drosophila melanogaster Dicer-1 prot... 28 9.8
AE014297-3226|AAF56056.1| 2249|Drosophila melanogaster CG4792-PA... 28 9.8
>AY051621-1|AAK93045.1| 611|Drosophila melanogaster GH26702p
protein.
Length = 611
Score = 39.1 bits (87), Expect = 0.005
Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 7/104 (6%)
Frame = +2
Query: 323 WKPQLIDGILKYGDRV----HTMSLPRASAPPGL---RPNEIIDQFHVTNFNVRLEIESE 481
WKP ID ++ G + M P AS P + ++ F + + +E+E+
Sbjct: 126 WKPDTIDMVVNEGQVLFNDSENMDPPNASDSPDIYDENEQKVTRHFKINDIEFAMELEAP 185
Query: 482 XLNRRTESWETGAVLNLKRAINRFFESYKHGVICAKSYCVAVWK 613
+E + NL+R + FF+ K+GV ++ + +WK
Sbjct: 186 F---EVYGYEN-VIRNLRRILRAFFKKAKYGVFFTPNWYLLIWK 225
>AE014296-942|AAF50789.1| 611|Drosophila melanogaster CG4669-PA
protein.
Length = 611
Score = 39.1 bits (87), Expect = 0.005
Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 7/104 (6%)
Frame = +2
Query: 323 WKPQLIDGILKYGDRV----HTMSLPRASAPPGL---RPNEIIDQFHVTNFNVRLEIESE 481
WKP ID ++ G + M P AS P + ++ F + + +E+E+
Sbjct: 126 WKPDTIDMVVNEGQVLFNDSENMDPPNASDSPDIYDENEQKVTRHFKINDIEFAMELEAP 185
Query: 482 XLNRRTESWETGAVLNLKRAINRFFESYKHGVICAKSYCVAVWK 613
+E + NL+R + FF+ K+GV ++ + +WK
Sbjct: 186 F---EVYGYEN-VIRNLRRILRAFFKKAKYGVFFTPNWYLLIWK 225
>AE013599-2559|AAF57791.1| 649|Drosophila melanogaster CG18635-PA
protein.
Length = 649
Score = 30.7 bits (66), Expect = 1.8
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 305 IEPHIHWKPQLIDGILKYGD-RVHTMSLPRASAPPGLRPNEIIDQFHVTNFNVRLEIESE 481
I+ ++ P+L+ G LK D HT+ +P++ P L P +++D + + I+ +
Sbjct: 418 IKENVPHPPKLLIGRLKDEDPEEHTVLIPQSPKPSPLTPKDVVDFYFPRPTKIVNGIQQD 477
Query: 482 XLNRRTESW 508
RT S+
Sbjct: 478 DFAGRTVSF 486
>AY052009-1|AAK93433.1| 385|Drosophila melanogaster LD47223p
protein.
Length = 385
Score = 29.5 bits (63), Expect = 4.2
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 6/53 (11%)
Frame = +2
Query: 497 TESWETGAV-LNLKRAINRFF-----ESYKHGVICAKSYCVAVWKATDDKAIC 637
TES G + LN +A+N + YKH C KS + + K T DKA C
Sbjct: 49 TESSNKGMIILNRPKALNAINLEMVRKIYKHLKKCEKSKSLVIIKGTGDKAFC 101
>AE014297-2024|AAF55181.2| 385|Drosophila melanogaster CG5044-PA,
isoform A protein.
Length = 385
Score = 29.5 bits (63), Expect = 4.2
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 6/53 (11%)
Frame = +2
Query: 497 TESWETGAV-LNLKRAINRFF-----ESYKHGVICAKSYCVAVWKATDDKAIC 637
TES G + LN +A+N + YKH C KS + + K T DKA C
Sbjct: 49 TESSNKGMIILNRPKALNAINLEMVRKIYKHLKKCEKSKSLVIIKGTGDKAFC 101
>AE014297-2023|AAN13658.2| 386|Drosophila melanogaster CG5044-PB,
isoform B protein.
Length = 386
Score = 29.5 bits (63), Expect = 4.2
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 6/53 (11%)
Frame = +2
Query: 497 TESWETGAV-LNLKRAINRFF-----ESYKHGVICAKSYCVAVWKATDDKAIC 637
TES G + LN +A+N + YKH C KS + + K T DKA C
Sbjct: 50 TESSNKGMIILNRPKALNAINLEMVRKIYKHLKKCEKSKSLVIIKGTGDKAFC 102
>AE014296-3523|AAF51713.2| 1737|Drosophila melanogaster CG32436-PA
protein.
Length = 1737
Score = 29.5 bits (63), Expect = 4.2
Identities = 27/127 (21%), Positives = 47/127 (37%), Gaps = 3/127 (2%)
Frame = +2
Query: 236 LFRASERDHQDAANSIMGIVVENIEPHIHWKPQLIDGILKYGDRVHTMSLPRASAPP--- 406
+F R Q +M ++ + W P L+D I+ G S+ + S
Sbjct: 1529 VFEDEVRGRQYLGCYVMACCAASVYRLMDWSPHLLDTIVVSGSTYFKESIDQISKEDYEF 1588
Query: 407 GLRPNEIIDQFHVTNFNVRLEIESEXLNRRTESWETGAVLNLKRAINRFFESYKHGVICA 586
L I NF V +E R ++ +NL A+ FF Y+ G++
Sbjct: 1589 SLENLNIDCSMDTINFVVHIEHVCYGKLYRVPTFNR---MNLSEALIYFFSHYQFGIVSV 1645
Query: 587 KSYCVAV 607
+ +A+
Sbjct: 1646 RKRSLAI 1652
>DQ398892-1|ABD61608.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.3 bits (60), Expect = 9.8
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 185 QPRPSFGQR--KTGTRRGILFRASERDHQDAANSIMGIVVEN 304
+P+PS G + TRR + R RDH D ++++ ++ N
Sbjct: 402 KPKPSSGANTAQPRTRRRVYTRRHHRDHNDGSDTLCALIYCN 443
>DQ398891-1|ABD61607.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.3 bits (60), Expect = 9.8
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 185 QPRPSFGQR--KTGTRRGILFRASERDHQDAANSIMGIVVEN 304
+P+PS G + TRR + R RDH D ++++ ++ N
Sbjct: 402 KPKPSSGANTAQPRTRRRVYTRRHHRDHNDGSDTLCALIYCN 443
>DQ398889-1|ABD61605.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.3 bits (60), Expect = 9.8
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 185 QPRPSFGQR--KTGTRRGILFRASERDHQDAANSIMGIVVEN 304
+P+PS G + TRR + R RDH D ++++ ++ N
Sbjct: 402 KPKPSSGANTAQPRTRRRVYTRRHHRDHNDGSDTLCALIYCN 443
>DQ398888-1|ABD61604.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.3 bits (60), Expect = 9.8
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 185 QPRPSFGQR--KTGTRRGILFRASERDHQDAANSIMGIVVEN 304
+P+PS G + TRR + R RDH D ++++ ++ N
Sbjct: 402 KPKPSSGANTAQPRTRRRVYTRRHHRDHNDGSDTLCALIYCN 443
>DQ398887-1|ABD61603.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.3 bits (60), Expect = 9.8
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 185 QPRPSFGQR--KTGTRRGILFRASERDHQDAANSIMGIVVEN 304
+P+PS G + TRR + R RDH D ++++ ++ N
Sbjct: 402 KPKPSSGANTAQPRTRRRVYTRRHHRDHNDGSDTLCALIYCN 443
>DQ398886-1|ABD61602.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.3 bits (60), Expect = 9.8
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 185 QPRPSFGQR--KTGTRRGILFRASERDHQDAANSIMGIVVEN 304
+P+PS G + TRR + R RDH D ++++ ++ N
Sbjct: 402 KPKPSSGANTAQPRTRRRVYTRRHHRDHNDGSDTLCALIYCN 443
>DQ398885-1|ABD61601.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.3 bits (60), Expect = 9.8
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 185 QPRPSFGQR--KTGTRRGILFRASERDHQDAANSIMGIVVEN 304
+P+PS G + TRR + R RDH D ++++ ++ N
Sbjct: 402 KPKPSSGANTAQPRTRRRVYTRRHHRDHNDGSDTLCALIYCN 443
>AE014297-3226|AAF56056.1| 2249|Drosophila melanogaster CG4792-PA
protein.
Length = 2249
Score = 28.3 bits (60), Expect = 9.8
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 185 QPRPSFGQR--KTGTRRGILFRASERDHQDAANSIMGIVVEN 304
+P+PS G + TRR + R RDH D ++++ ++ N
Sbjct: 459 KPKPSSGANTAQPRTRRRVYTRRHHRDHNDGSDTLCALIYCN 500
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,667,540
Number of Sequences: 53049
Number of extensions: 472302
Number of successful extensions: 1343
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1342
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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