Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0457
(647 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 212 2e-55
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 209 1e-54
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 208 3e-54
SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34) 172 2e-43
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 172 2e-43
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 135 3e-32
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 107 7e-31
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 7e-19
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 90 1e-18
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 89 2e-18
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 4e-18
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 89 4e-18
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 88 7e-18
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 88 7e-18
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 87 9e-18
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 87 9e-18
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 1e-17
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 87 1e-17
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 87 1e-17
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 87 1e-17
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 5e-17
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 4e-16
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 65 5e-11
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 58 5e-09
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 51 9e-07
SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 36 0.028
SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 30 1.4
SB_48118| Best HMM Match : DUF1314 (HMM E-Value=3.2) 29 3.3
SB_20374| Best HMM Match : zf-U1 (HMM E-Value=1.7) 29 3.3
SB_21573| Best HMM Match : WD40 (HMM E-Value=4.1e-32) 29 4.3
SB_47504| Best HMM Match : RVT_1 (HMM E-Value=1.4e-07) 27 9.9
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 212 bits (517), Expect = 2e-55
Identities = 95/126 (75%), Positives = 108/126 (85%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 433
RGRMSMKEVDEQ+ N+QNKNS+YFVEWIPNN K AVCDIPPRGLKM++TFIGN+TAIQ +
Sbjct: 318 RGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQEL 377
Query: 434 FKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQYQDATADDEGSST 613
FKR+SEQF AMFRR AFLHWYTGEG + AESNMNDL+SEYQQYQDATA++EG
Sbjct: 378 FKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFD 437
Query: 614 RKAEEG 631
+ EEG
Sbjct: 438 EEEEEG 443
Score = 168 bits (409), Expect = 3e-42
Identities = 76/86 (88%), Positives = 80/86 (93%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
SG+TTCLRFPGQLNADLRKLAVNMVPFPRLHF+ PGFAPLTSRG+QQYRALTVPELT QM
Sbjct: 234 SGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQM 293
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGG 260
F AKNMM ACDPRHGRYLTVA +F G
Sbjct: 294 FDAKNMMAACDPRHGRYLTVAAMFRG 319
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 209 bits (511), Expect = 1e-54
Identities = 94/125 (75%), Positives = 107/125 (85%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 433
RGRMSMKEVDEQ+ N+QNKNS+YFVEWIPNN K AVCDIPPRGLKM++TFIGN+TAIQ +
Sbjct: 318 RGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQEL 377
Query: 434 FKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQYQDATADDEGSST 613
FKR+SEQF AMFRR AFLHWYTGEG + AESNMNDL+SEYQQYQDATA++EG
Sbjct: 378 FKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFD 437
Query: 614 RKAEE 628
+ EE
Sbjct: 438 EEEEE 442
Score = 168 bits (409), Expect = 3e-42
Identities = 76/86 (88%), Positives = 80/86 (93%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
SG+TTCLRFPGQLNADLRKLAVNMVPFPRLHF+ PGFAPLTSRG+QQYRALTVPELT QM
Sbjct: 234 SGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQM 293
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGG 260
F AKNMM ACDPRHGRYLTVA +F G
Sbjct: 294 FDAKNMMAACDPRHGRYLTVAAMFRG 319
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 208 bits (508), Expect = 3e-54
Identities = 93/125 (74%), Positives = 107/125 (85%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 433
RGRMSMKE+DEQ+ N+QNKNS+YFVEWIPNN K AVCDIPPRGLKM++TFIGN+TAIQ +
Sbjct: 263 RGRMSMKELDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQEL 322
Query: 434 FKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQYQDATADDEGSST 613
FKR+SEQF AMFRR AFLHWYTGEG + AESNMNDL+SEYQQYQDATA++EG
Sbjct: 323 FKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFD 382
Query: 614 RKAEE 628
+ EE
Sbjct: 383 EEEEE 387
Score = 163 bits (395), Expect = 1e-40
Identities = 76/93 (81%), Positives = 81/93 (87%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
SG+TTCLRFPGQLNADLRKLAVNMVPFPRL F+ PGFAPLTSRG+QQYRALTVPELT QM
Sbjct: 179 SGVTTCLRFPGQLNADLRKLAVNMVPFPRLPFFMPGFAPLTSRGSQQYRALTVPELTQQM 238
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKL 281
F AKNMM ACDP HGRYLTVA +F G K+L
Sbjct: 239 FDAKNMMAACDPLHGRYLTVAAMFRGRMSMKEL 271
>SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34)
Length = 747
Score = 172 bits (419), Expect = 2e-43
Identities = 78/109 (71%), Positives = 88/109 (80%)
Frame = +2
Query: 278 VDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTIFKRVSEQF 457
VDEQ+ N QNKNS +FVEWIPNN K VCDI P+GLKMA+TF+GN TAIQ +FKRV EQF
Sbjct: 91 VDEQMLNTQNKNSPFFVEWIPNNVKTTVCDIAPKGLKMAATFVGNNTAIQELFKRVGEQF 150
Query: 458 VAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQYQDATADDEG 604
AMFRR AFLHWYTGEG + AESNM+DLI+EYQQYQ+A AD EG
Sbjct: 151 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIAEYQQYQEAEADIEG 199
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 172 bits (419), Expect = 2e-43
Identities = 78/109 (71%), Positives = 88/109 (80%)
Frame = +2
Query: 278 VDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTIFKRVSEQF 457
VDEQ+ N QNKNS +FVEWIPNN K VCDI P+GLKMA+TF+GN TAIQ +FKRV EQF
Sbjct: 153 VDEQMLNTQNKNSPFFVEWIPNNVKTTVCDIAPKGLKMAATFVGNNTAIQELFKRVGEQF 212
Query: 458 VAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQYQDATADDEG 604
AMFRR AFLHWYTGEG + AESNM+DLI+EYQQYQ+A AD EG
Sbjct: 213 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIAEYQQYQEAEADIEG 261
Score = 106 bits (254), Expect = 2e-23
Identities = 47/64 (73%), Positives = 53/64 (82%)
Frame = +3
Query: 72 MVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQMFXAKNMMVACDPRHGRYLTVATI 251
MVPFPRLHF+ PGFAPL SR QQY+ ++V ELT QMF A+NMM ACDPRHGRYLTVA I
Sbjct: 1 MVPFPRLHFFMPGFAPLASRANQQYQNVSVEELTQQMFDARNMMTACDPRHGRYLTVAAI 60
Query: 252 FGGE 263
F G+
Sbjct: 61 FRGK 64
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 135 bits (326), Expect = 3e-32
Identities = 58/86 (67%), Positives = 72/86 (83%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
SG+TTCLRFPGQLNADLRKLAVNM+P+PRLHF+ PGFAPLTSR YRALTV +LT +
Sbjct: 139 SGLTTCLRFPGQLNADLRKLAVNMIPYPRLHFFMPGFAPLTSRECVSYRALTVADLTQAI 198
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGG 260
F KN+++AC+P+ G+YLT A ++ G
Sbjct: 199 FDNKNLLIACNPKRGKYLTYAAMYRG 224
Score = 133 bits (322), Expect = 1e-31
Identities = 60/115 (52%), Positives = 83/115 (72%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 433
RG MSMKEV++Q+A Q++ S+ FV+WIPNN K+AVCD+PP +KM+++ I + TAIQ +
Sbjct: 223 RGLMSMKEVEDQMAFAQDRYSSLFVDWIPNNGKVAVCDVPPHDMKMSASCISSNTAIQEL 282
Query: 434 FKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQYQDATADD 598
FKR+ + MFRR AFLHWYT EG A++++ DLIS YQQ +D A+D
Sbjct: 283 FKRIRLHYKLMFRRRAFLHWYTEEGMDSQQFEEADNDILDLISTYQQCEDMKAED 337
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 107 bits (257), Expect(2) = 7e-31
Identities = 47/69 (68%), Positives = 56/69 (81%)
Frame = +2
Query: 302 QNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTIFKRVSEQFVAMFRRXA 481
Q+ +S+ FVEWIPNN K AVCD+PP GLK A+TF+ N+TAIQ F+R +EQF AMFRR A
Sbjct: 153 QDSHSSSFVEWIPNNMKTAVCDVPPVGLKNAATFLYNSTAIQEAFRRFTEQFAAMFRRRA 212
Query: 482 FLHWYTGEG 508
FLHWYT EG
Sbjct: 213 FLHWYTTEG 221
Score = 44.4 bits (100), Expect(2) = 7e-31
Identities = 19/32 (59%), Positives = 25/32 (78%)
Frame = +2
Query: 533 AESNMNDLISEYQQYQDATADDEGSSTRKAEE 628
A+SN+NDLISEYQQY+DA +DD+ + EE
Sbjct: 259 ADSNLNDLISEYQQYEDAKSDDDVITASDEEE 290
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 91.1 bits (216), Expect = 7e-19
Identities = 42/103 (40%), Positives = 58/103 (56%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + LTV E+T
Sbjct: 221 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITTSC 280
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTSNWRIFRTK 311
F N MV CDPRHG+Y+ +F G+ + K + + +TK
Sbjct: 281 FEPANQMVKCDPRHGKYMACCLLFRGDVVPKDVNAAIATIKTK 323
Score = 76.6 bits (180), Expect = 2e-14
Identities = 34/91 (37%), Positives = 51/91 (56%)
Frame = +3
Query: 39 LNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQMFXAKNMMVACDP 218
LN DL + N+VP+PR+HF +AP+ S + +TV +LT F N MV CDP
Sbjct: 664 LNVDLMEFQTNLVPYPRIHFPMATYAPIISAEKAYHEMMTVSDLTNACFEPANQMVKCDP 723
Query: 219 RHGRYLTVATIFGGECL*KKLTSNWRIFRTK 311
RHG+Y+ +F G+ + K + + +TK
Sbjct: 724 RHGKYMACCLLFRGDVVPKDVNAAIATIKTK 754
Score = 66.5 bits (155), Expect = 2e-11
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 9/129 (6%)
Frame = +2
Query: 242 CDDIRGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMAS 397
C RG + K+V+ +A I+ K + FV+W P K+ + PP ++ A
Sbjct: 732 CLLFRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAV 791
Query: 398 TFIGNTTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQY 577
+ NTTAI + R+ +F M+ + AF+HWY GEG + A ++ L +Y++
Sbjct: 792 CMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV 851
Query: 578 Q-DATADDE 601
++ +DE
Sbjct: 852 AVESVEEDE 860
Score = 65.7 bits (153), Expect = 3e-11
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Frame = +2
Query: 242 CDDIRGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMAS 397
C RG + K+V+ +A I+ K + FV+W P K+ + PP ++ A
Sbjct: 301 CLLFRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAV 360
Query: 398 TFIGNTTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQ 574
+ NTTAI + R+ +F M+ + AF+HWY GEG + A ++ L +Y++
Sbjct: 361 CMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 419
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 90.2 bits (214), Expect = 1e-18
Identities = 41/103 (39%), Positives = 58/103 (56%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + LTV ++T
Sbjct: 607 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPMASYAPVVSAEKAYHEQLTVADITNSC 666
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTSNWRIFRTK 311
F N MV CDPRHG+Y+ ++ G+ + K + S +TK
Sbjct: 667 FEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIATIKTK 709
Score = 65.7 bits (153), Expect = 3e-11
Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 8/115 (6%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMASTFIG 409
RG + K+V+ +A I+ K + FV+W P K+ + PP ++ A +
Sbjct: 691 RGDVVPKDVNSAIATIKTKKTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 750
Query: 410 NTTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQ 574
NTTAI + R+ +F M+ + AF+HWY GEG + A ++ L +Y++
Sbjct: 751 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 805
Score = 63.3 bits (147), Expect = 2e-10
Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 8/134 (5%)
Frame = +2
Query: 227 EVFDRCDDIRGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------G 382
E+ + C + +M +V+ +A I+ K + FV+W P K+ + PP
Sbjct: 1094 EITNACFEPANQM---DVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAK 1150
Query: 383 LKMASTFIGNTTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLIS 562
++ A + NTTAI + R+ +F M+ + AF+HWY GEG + A ++ L
Sbjct: 1151 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 1210
Query: 563 EYQQYQDATADDEG 604
+Y++ + + EG
Sbjct: 1211 DYEEVGVDSVEGEG 1224
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/67 (43%), Positives = 37/67 (55%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + LTV E+T
Sbjct: 1040 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNAC 1099
Query: 183 FXAKNMM 203
F N M
Sbjct: 1100 FEPANQM 1106
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 89.4 bits (212), Expect = 2e-18
Identities = 41/103 (39%), Positives = 59/103 (57%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 236 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNAC 295
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTSNWRIFRTK 311
F N MV CDPRHG+Y+ ++ G+ + K + S+ +TK
Sbjct: 296 FEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNSSIATIKTK 338
Score = 68.1 bits (159), Expect = 6e-12
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 8/125 (6%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMASTFIG 409
RG + K+V+ +A I+ K + FV+W P K+ + PP ++ A +
Sbjct: 320 RGDVVPKDVNSSIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 379
Query: 410 NTTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQYQDAT 589
NTTAI + R+ +F M+ + AF+HWY GEG + A ++ L +Y++ +
Sbjct: 380 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 439
Query: 590 ADDEG 604
+ EG
Sbjct: 440 VEGEG 444
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 88.6 bits (210), Expect = 4e-18
Identities = 41/103 (39%), Positives = 58/103 (56%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + LTV E+T
Sbjct: 236 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNAC 295
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTSNWRIFRTK 311
F N MV CDPRHG+Y+ ++ G+ + K + + +TK
Sbjct: 296 FEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTK 338
Score = 68.1 bits (159), Expect = 6e-12
Identities = 38/133 (28%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMASTFIG 409
RG + K+V+ +A I+ K + FV+W P K+ + PP ++ A +
Sbjct: 320 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 379
Query: 410 NTTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQYQDAT 589
NTTAI + R+ +F M+ + AF+HWY GEG + A ++ L +Y++
Sbjct: 380 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV-GVD 438
Query: 590 ADDEGSSTRKAEE 628
+ +EG + EE
Sbjct: 439 SVEEGEEEEEGEE 451
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 88.6 bits (210), Expect = 4e-18
Identities = 41/103 (39%), Positives = 58/103 (56%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + LTV E+T
Sbjct: 669 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNAC 728
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTSNWRIFRTK 311
F N MV CDPRHG+Y+ ++ G+ + K + + +TK
Sbjct: 729 FEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTK 771
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/103 (38%), Positives = 58/103 (56%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 236 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNAC 295
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTSNWRIFRTK 311
F N MV CDPRHG+Y+ ++ G+ + K + + +TK
Sbjct: 296 FEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTK 338
Score = 67.7 bits (158), Expect = 8e-12
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 8/132 (6%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMASTFIG 409
RG + K+V+ +A I+ K + FV+W P K+ + PP ++ A +
Sbjct: 753 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 812
Query: 410 NTTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQYQDAT 589
NTTAI + R+ +F M+ + AF+HWY GEG + A ++ L +Y++ +
Sbjct: 813 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 872
Query: 590 ADDEGSSTRKAE 625
+ EG E
Sbjct: 873 VEGEGEEEEGEE 884
Score = 65.3 bits (152), Expect = 4e-11
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Frame = +2
Query: 242 CDDIRGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMAS 397
C RG + K+V+ +A I+ K + FV+W P K+ + PP ++ A
Sbjct: 316 CMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAV 375
Query: 398 TFIGNTTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQ 574
+ NTTA+ + R+ +F M+ + AF+HWY GEG + A ++ L +Y++
Sbjct: 376 CMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 87.8 bits (208), Expect = 7e-18
Identities = 40/103 (38%), Positives = 58/103 (56%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + +TV +LT
Sbjct: 201 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPMATYAPIISAEKAYHEMMTVSDLTNAC 260
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTSNWRIFRTK 311
F N MV CDPRHG+Y+ ++ G+ + K + + +TK
Sbjct: 261 FEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTK 303
Score = 66.5 bits (155), Expect = 2e-11
Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 9/125 (7%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMASTFIG 409
RG + K+V+ +A I+ K + FV+W P K+ + PP ++ A +
Sbjct: 285 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 344
Query: 410 NTTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQY-QDA 586
NTTAI + R+ +F M+ + AF+HWY GEG + A ++ L +Y++ D+
Sbjct: 345 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 404
Query: 587 TADDE 601
D E
Sbjct: 405 VGDGE 409
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 87.8 bits (208), Expect = 7e-18
Identities = 41/103 (39%), Positives = 57/103 (55%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + LTV E+T
Sbjct: 161 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNSC 220
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTSNWRIFRTK 311
F N MV CDPRHG+Y+ ++ G+ + K + + R K
Sbjct: 221 FEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIRPK 263
Score = 54.4 bits (125), Expect = 8e-08
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 433
RG + K+V+ +A I+ K + F +W P K+ + PP + I
Sbjct: 245 RGDVVPKDVNAAIATIRPKRTFQFGDWCPTGFKVGINSQPPTVVPGGDL----AKPIAEA 300
Query: 434 FKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQY-QDATADDE 601
+ R+ +F M+ + AF+HWY GEG + A ++ L +Y++ D+ D E
Sbjct: 301 WARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVGDGE 357
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 87.4 bits (207), Expect = 9e-18
Identities = 40/103 (38%), Positives = 58/103 (56%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + LTV ++T
Sbjct: 34 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVADITNAC 93
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTSNWRIFRTK 311
F N MV CDPRHG+Y+ ++ G+ + K + + +TK
Sbjct: 94 FEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTK 136
Score = 62.1 bits (144), Expect = 4e-10
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 8/115 (6%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGL--------KMASTFIG 409
RG + K+V+ +A I+ K + FV+W P K+ + P + + + +
Sbjct: 118 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQQPTAVPGGDLAKVQRSVCMLS 177
Query: 410 NTTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQ 574
NTTAI + R++ +F M+ + AF+HWY GEG + A ++ L +Y++
Sbjct: 178 NTTAIADAWARLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 232
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 87.4 bits (207), Expect = 9e-18
Identities = 40/103 (38%), Positives = 58/103 (56%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + LTV ++T
Sbjct: 235 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVADITNAC 294
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTSNWRIFRTK 311
F N MV CDPRHG+Y+ ++ G+ + K + + +TK
Sbjct: 295 FEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTK 337
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTF 403
RG + K+V+ +A I+ K + FV+W P K+ + P A+ +
Sbjct: 319 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIRHKAPGHFSWATVY 368
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/103 (38%), Positives = 58/103 (56%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 173 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNAC 232
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTSNWRIFRTK 311
F N MV CDPRHG+Y+ ++ G+ + K + + +TK
Sbjct: 233 FEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTK 275
Score = 68.1 bits (159), Expect = 6e-12
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 8/136 (5%)
Frame = +2
Query: 242 CDDIRGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMAS 397
C RG + K+V+ +A I+ K + FV+W P K+ + PP ++ A
Sbjct: 253 CMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAV 312
Query: 398 TFIGNTTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQY 577
+ NTTAI + R+ +F M+ + AF+HWY GEG + A ++ L +Y++
Sbjct: 313 CMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV 372
Query: 578 QDATADDEGSSTRKAE 625
+ + EG E
Sbjct: 373 GVDSVEGEGEEEEGEE 388
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/103 (38%), Positives = 58/103 (56%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 300 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNAC 359
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTSNWRIFRTK 311
F N MV CDPRHG+Y+ ++ G+ + K + + +TK
Sbjct: 360 FEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTK 402
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/103 (38%), Positives = 58/103 (56%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 821 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNAC 880
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTSNWRIFRTK 311
F N MV CDPRHG+Y+ ++ G+ + K + + +TK
Sbjct: 881 FEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTK 923
Score = 68.5 bits (160), Expect = 4e-12
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 8/125 (6%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMASTFIG 409
RG + K+V+ +A I+ K + FV+W P K+ + PP ++ A +
Sbjct: 905 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 964
Query: 410 NTTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQYQDAT 589
NTTAI + R+ +F M+ + AF+HWY GEG + A ++ L +Y++ +
Sbjct: 965 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 1024
Query: 590 ADDEG 604
++EG
Sbjct: 1025 VEEEG 1029
Score = 34.3 bits (75), Expect = 0.087
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 242 CDDIRGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP 376
C RG + K+V+ +A I+ K + FV+W P K+ + PP
Sbjct: 380 CMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 424
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/103 (38%), Positives = 58/103 (56%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 161 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNAC 220
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTSNWRIFRTK 311
F N MV CDPRHG+Y+ ++ G+ + K + + +TK
Sbjct: 221 FEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTK 263
Score = 68.1 bits (159), Expect = 6e-12
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 8/136 (5%)
Frame = +2
Query: 242 CDDIRGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMAS 397
C RG + K+V+ +A I+ K + FV+W P K+ + PP ++ A
Sbjct: 241 CMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAV 300
Query: 398 TFIGNTTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQY 577
+ NTTAI + R+ +F M+ + AF+HWY GEG + A ++ L +Y++
Sbjct: 301 CMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV 360
Query: 578 QDATADDEGSSTRKAE 625
+ + EG E
Sbjct: 361 GVDSVEGEGEEEEGEE 376
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/103 (38%), Positives = 58/103 (56%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 34 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNAC 93
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTSNWRIFRTK 311
F N MV CDPRHG+Y+ ++ G+ + K + + +TK
Sbjct: 94 FEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTK 136
Score = 68.1 bits (159), Expect = 6e-12
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 8/136 (5%)
Frame = +2
Query: 242 CDDIRGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMAS 397
C RG + K+V+ +A I+ K + FV+W P K+ + PP ++ A
Sbjct: 114 CMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAV 173
Query: 398 TFIGNTTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQY 577
+ NTTAI + R+ +F M+ + AF+HWY GEG + A ++ L +Y++
Sbjct: 174 CMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV 233
Query: 578 QDATADDEGSSTRKAE 625
+ + EG E
Sbjct: 234 GVDSVEGEGEEEEGEE 249
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 85.0 bits (201), Expect = 5e-17
Identities = 37/87 (42%), Positives = 52/87 (59%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S IT+ LRF G LN DL + N+VP+PR+HF +AP+ S + LTV ++T
Sbjct: 1147 SSITSSLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISPEKAYHEQLTVAQITNMC 1206
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGE 263
F N MV CDPRHG+Y+ ++ G+
Sbjct: 1207 FDPNNQMVKCDPRHGKYMACCMLYRGD 1233
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 81.8 bits (193), Expect = 4e-16
Identities = 35/95 (36%), Positives = 54/95 (56%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S +T LRF G LN DL + N+VP+PR+HF +AP+ + ++V E+T
Sbjct: 367 SSVTASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVIGADKAYHENMSVAEITSAC 426
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTS 287
F N MV CDPR+G+Y+ ++ G+ + K + S
Sbjct: 427 FEPSNQMVKCDPRYGKYMACCLLYRGDVVPKDVNS 461
Score = 48.8 bits (111), Expect = 4e-06
Identities = 22/72 (30%), Positives = 38/72 (52%)
Frame = +2
Query: 383 LKMASTFIGNTTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLIS 562
++ A + NTTAI + R+ +F M+ + AF+HWY GEG + A ++ L
Sbjct: 523 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 582
Query: 563 EYQQYQDATADD 598
+Y++ + DD
Sbjct: 583 DYEEVGADSPDD 594
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNT 415
RG + K+V+ +A I+ K + FV+W P K +I + K TF T
Sbjct: 451 RGDVVPKDVNSAIAAIKMKRTIQFVDWCPTGFKCHP-NISDKQKKSTKTFYSGT 503
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 64.9 bits (151), Expect = 5e-11
Identities = 33/114 (28%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Frame = +2
Query: 257 GRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMASTFIGN 412
G + +K+V+ +A I+ K + FV+W P K+ + PP ++ A + N
Sbjct: 305 GDVVLKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSN 364
Query: 413 TTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQ 574
TTAI + R+ +F M+ + AF+HWY GEG + A ++ L +Y++
Sbjct: 365 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 418
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/57 (43%), Positives = 34/57 (59%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELT 173
S +T LRF G LN DL + N+VP+PR+HF +AP+ S + LTV E+T
Sbjct: 226 SSVTASLRFDGSLNVDLNEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEIT 282
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 58.4 bits (135), Expect = 5e-09
Identities = 26/84 (30%), Positives = 43/84 (51%)
Frame = +3
Query: 9 ITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQMFX 188
+T+ RF G LN DL ++ +N+VPFP+LH+ PL + + + ++ F
Sbjct: 285 MTSSARFEGSLNVDLNEITMNLVPFPKLHYLVSSQTPLYALTDVKLPPRRLDQMFTDAFS 344
Query: 189 AKNMMVACDPRHGRYLTVATIFGG 260
+ ++ DP+H YL A I G
Sbjct: 345 KDHQLIKADPKHNLYLACALILRG 368
Score = 49.6 bits (113), Expect = 2e-06
Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 1/119 (0%)
Frame = +2
Query: 251 IRGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQT 430
+RG + + ++ + + K S F+ W K +C +PP G + + N + I+
Sbjct: 366 LRGNVEVSDIRRNIERL--KPSLKFIHWNQEGWKTGLCSVPPVGQPYSLLTLANNSCIKN 423
Query: 431 IFKRVSEQFVAMFRRXAFLHWYTG-EGWMKWSSRRAESNMNDLISEYQQYQDATADDEG 604
F + ++F+ +++R A +H YT +G +++ LI EY D A EG
Sbjct: 424 TFVELKDRFMKLYKRKAHVHHYTHVDGLEVGQFDDGLESLSWLIQEYATL-DTNAIPEG 481
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 50.8 bits (116), Expect = 9e-07
Identities = 24/75 (32%), Positives = 43/75 (57%)
Frame = +2
Query: 404 IGNTTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQYQD 583
+ NTTAI + R++ +F M+ + AF+HWY GEG + A ++ L +Y++
Sbjct: 76 LSNTTAIADAWARLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGV 135
Query: 584 ATADDEGSSTRKAEE 628
+ D++G + +AEE
Sbjct: 136 DSVDNDGET--EAEE 148
>SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 48.8 bits (111), Expect = 4e-06
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +3
Query: 12 TTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTS 128
TT LR+PG +N DL L +++P PRLHF G+ PLT+
Sbjct: 276 TTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTT 314
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 35.9 bits (79), Expect = 0.028
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFP 86
S IT LRF G LN DL + N+VP+P
Sbjct: 111 SSITASLRFDGALNVDLTEFQTNLVPYP 138
>SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 33.1 bits (72), Expect = 0.20
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 467 FRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQYQDATADDEG 604
+ + AF+HWY GEG + A ++ L +Y++ + + EG
Sbjct: 13 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEGEG 58
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +3
Query: 3 SGITTCLRFPGQ 38
SG+TTCLRFPGQ
Sbjct: 447 SGVTTCLRFPGQ 458
>SB_48118| Best HMM Match : DUF1314 (HMM E-Value=3.2)
Length = 341
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +3
Query: 102 TPGFAPLTSRGAQQYRALTVPELTLQMFXAKNM--MVACDPRHGRYLTVA 245
+PG+ L++ G+ Q T P +T +M+ K +A P R+ T+A
Sbjct: 117 SPGYLSLSAFGSPQVSRSTTPGITYEMYGVKERGNSLAARPATSRHATLA 166
>SB_20374| Best HMM Match : zf-U1 (HMM E-Value=1.7)
Length = 783
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 433 YGLYGRRVTNEGRSHFKTPRRYVTHGNLA 347
Y L GR +GRSH +TP+ YV NL+
Sbjct: 74 YLLSGRGKHGKGRSHRQTPQEYVDTHNLS 102
>SB_21573| Best HMM Match : WD40 (HMM E-Value=4.1e-32)
Length = 458
Score = 28.7 bits (61), Expect = 4.3
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +2
Query: 197 HDGRV*SSTREVFDRCDDIRGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIA-VCD 367
HDGR+ +S E D DI +M E E++ +Q T+ V W PN +A CD
Sbjct: 285 HDGRMLASGSE--DLIIDI----AMVETGERICEVQCHAPTFTVAWHPNKPLLAFACD 336
>SB_47504| Best HMM Match : RVT_1 (HMM E-Value=1.4e-07)
Length = 1002
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 428 TIFKRVSEQFVAMFRRXAFLHWYTGEGWM 514
TI+++V +Q VAMF ++L + + W+
Sbjct: 83 TIYRQVIKQLVAMFVGVSYLQLFVQQNWL 111
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,369,003
Number of Sequences: 59808
Number of extensions: 463966
Number of successful extensions: 1344
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1323
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -