Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0457
(647 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 208 3e-54
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 205 2e-53
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 202 2e-52
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 201 3e-52
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 201 4e-52
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 201 4e-52
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 110 7e-25
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 110 7e-25
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 91 6e-19
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 91 6e-19
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 91 6e-19
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 91 6e-19
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 91 8e-19
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 91 8e-19
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 91 8e-19
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 91 8e-19
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 88 6e-18
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 88 6e-18
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 88 6e-18
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 85 4e-17
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 83 2e-16
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 83 2e-16
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 83 2e-16
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 81 7e-16
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 44 9e-05
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 30 1.6
U53342-2|AAA96214.1| 272|Caenorhabditis elegans Suppressor of a... 30 1.6
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 30 1.6
U53342-1|AAA96213.2| 371|Caenorhabditis elegans Suppressor of a... 29 2.1
U20861-9|AAN84854.1| 192|Caenorhabditis elegans Hypothetical pr... 28 5.0
U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical pr... 28 5.0
AL024499-2|CAB54260.2| 242|Caenorhabditis elegans Hypothetical ... 28 5.0
AL024499-1|CAB54261.2| 295|Caenorhabditis elegans Hypothetical ... 28 5.0
U00066-4|AAM54165.2| 75|Caenorhabditis elegans Hypothetical pr... 28 6.6
L23648-7|AAA28031.2| 962|Caenorhabditis elegans Abnormal cell l... 27 8.7
AF104917-1|AAD22772.1| 962|Caenorhabditis elegans LIN-36 protein. 27 8.7
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 208 bits (507), Expect = 3e-54
Identities = 92/117 (78%), Positives = 104/117 (88%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 433
RGRMSMKEVDEQ+ N+QNKNS+YFVEWIPNN K AVCDIPPRG+KMA+TF+GN+TAIQ +
Sbjct: 318 RGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGVKMAATFVGNSTAIQEL 377
Query: 434 FKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQYQDATADDEG 604
FKR+SEQF AMFRR AFLHWYTGEG + AESNMNDL+SEYQQYQ+ATADDEG
Sbjct: 378 FKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADDEG 434
Score = 167 bits (406), Expect = 6e-42
Identities = 75/86 (87%), Positives = 80/86 (93%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
SG+TTCLRFPGQLNADLRKLAVNMVPFPRLHF+ PGFAPLTSRG+QQYR+LTVPELT QM
Sbjct: 234 SGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRSLTVPELTQQM 293
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGG 260
F AKNMM ACDPRHGRYLTVA +F G
Sbjct: 294 FDAKNMMAACDPRHGRYLTVAAMFRG 319
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 205 bits (500), Expect = 2e-53
Identities = 92/126 (73%), Positives = 106/126 (84%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 433
RGRMSM+EVDEQ+ N+QNKNS+YFVEWIPNN K AVCDIPPRGLKMA+TF+GN+TAIQ +
Sbjct: 318 RGRMSMREVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFVGNSTAIQEL 377
Query: 434 FKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQYQDATADDEGSST 613
FKR+SEQF AMFRR AFLHWYTGEG + AESNMNDLISEYQQYQ+ATA+D+
Sbjct: 378 FKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEATAEDDVDGY 437
Query: 614 RKAEEG 631
+ E G
Sbjct: 438 AEGEAG 443
Score = 158 bits (384), Expect = 3e-39
Identities = 71/86 (82%), Positives = 77/86 (89%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
SG+TTCLRFPGQLNADLRKLAVNMVPFPRLHF+ PGFAPL+++G Q YRALTV ELT QM
Sbjct: 234 SGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGTQAYRALTVAELTQQM 293
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGG 260
F AKNMM ACDPRHGRYLTVA +F G
Sbjct: 294 FDAKNMMAACDPRHGRYLTVAAMFRG 319
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 202 bits (493), Expect = 2e-52
Identities = 90/116 (77%), Positives = 103/116 (88%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 433
RGRMSM+EVDEQ+ ++QNKNS+YFVEWIPNN K AVCDIPPRGLKMA+TF+GN+TAIQ +
Sbjct: 318 RGRMSMREVDEQMLSVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFVGNSTAIQEL 377
Query: 434 FKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQYQDATADDE 601
FKR+SEQF AMFRR AFLHWYTGEG + AESNMNDLISEYQQYQ+ATA+DE
Sbjct: 378 FKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEATAEDE 433
Score = 160 bits (388), Expect = 9e-40
Identities = 72/86 (83%), Positives = 78/86 (90%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
SG+TTCLRFPGQLNADLRKLAVNMVPFPRLHF+ PGFAPL+++GAQ YRALTV ELT QM
Sbjct: 234 SGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGAQAYRALTVAELTQQM 293
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGG 260
F AKNMM ACDPRHGRYLTVA +F G
Sbjct: 294 FDAKNMMAACDPRHGRYLTVAAMFRG 319
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 201 bits (491), Expect = 3e-52
Identities = 88/117 (75%), Positives = 104/117 (88%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 433
RGRMSM+EVD+Q+ N+QNKNS+YFVEWIPNN K AVCDIPPRGLKM++TFIGN+TAIQ +
Sbjct: 318 RGRMSMREVDDQMMNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQEL 377
Query: 434 FKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQYQDATADDEG 604
FKR+SEQF AMFRR AFLHWYTGEG + AESNMNDL+SEYQQYQ+ATA+++G
Sbjct: 378 FKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATAEEDG 434
Score = 160 bits (388), Expect = 9e-40
Identities = 72/86 (83%), Positives = 78/86 (90%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
SG+TTCLRFPGQLNADLRKLAVNMVPFPRLHF+ PGFAPL+++GAQ YRALTV ELT QM
Sbjct: 234 SGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGAQAYRALTVAELTQQM 293
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGG 260
F AKNMM ACDPRHGRYLTVA +F G
Sbjct: 294 FDAKNMMAACDPRHGRYLTVAAMFRG 319
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 201 bits (490), Expect = 4e-52
Identities = 90/124 (72%), Positives = 104/124 (83%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 433
RGRMSMKEVDEQ+ NIQNKNS+YFV+WIPNN K AVCDIPPRGLKM++TFIGN+TAIQ +
Sbjct: 318 RGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQEL 377
Query: 434 FKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQYQDATADDEGSST 613
FKR+SEQF AMFRR AFLHWYTGEG + AESNMNDL+SEYQQYQ+A AD++ +
Sbjct: 378 FKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAAADEDAAEA 437
Query: 614 RKAE 625
E
Sbjct: 438 FDGE 441
Score = 161 bits (391), Expect = 4e-40
Identities = 73/86 (84%), Positives = 76/86 (88%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
SG+TTCLRFPGQLNADLRKLAVNMVPFPRLHF+ PGFAPLTSR QQYRA+TVPELT Q
Sbjct: 234 SGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRSNQQYRAITVPELTQQC 293
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGG 260
F AKNMM ACDPRHGRYLT A IF G
Sbjct: 294 FDAKNMMAACDPRHGRYLTAAAIFRG 319
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 201 bits (490), Expect = 4e-52
Identities = 90/124 (72%), Positives = 104/124 (83%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 433
RGRMSMKEVDEQ+ NIQNKNS+YFV+WIPNN K AVCDIPPRGLKM++TFIGN+TAIQ +
Sbjct: 318 RGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQEL 377
Query: 434 FKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQYQDATADDEGSST 613
FKR+SEQF AMFRR AFLHWYTGEG + AESNMNDL+SEYQQYQ+A AD++ +
Sbjct: 378 FKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAAADEDAAEA 437
Query: 614 RKAE 625
E
Sbjct: 438 FDGE 441
Score = 161 bits (391), Expect = 4e-40
Identities = 73/86 (84%), Positives = 76/86 (88%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
SG+TTCLRFPGQLNADLRKLAVNMVPFPRLHF+ PGFAPLTSR QQYRA+TVPELT Q
Sbjct: 234 SGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRSNQQYRAITVPELTQQC 293
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGG 260
F AKNMM ACDPRHGRYLT A IF G
Sbjct: 294 FDAKNMMAACDPRHGRYLTAAAIFRG 319
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 110 bits (265), Expect = 7e-25
Identities = 52/109 (47%), Positives = 76/109 (69%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 433
RG+ + K+ EQ+ +++N++ + +E +P + VCDIP RGLK ++TFI N+TAIQ
Sbjct: 316 RGQQTEKKDAEQIISVENEDPSEMIESLPKSTNTDVCDIPSRGLKTSATFIANSTAIQEP 375
Query: 434 FKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQYQ 580
KR+S+QF +FRR AFLHWYT E + AE+ +NDLISE+QQY+
Sbjct: 376 LKRISKQFAGLFRRKAFLHWYTME---ESEFTDAENKVNDLISEFQQYE 421
Score = 72.9 bits (171), Expect = 2e-13
Identities = 39/92 (42%), Positives = 55/92 (59%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
SGITT RF G L D+RKL N PRLHF+ FAP+ +G +A ++ +LT Q+
Sbjct: 235 SGITTFQRFKGNLKTDIRKL--NTAGSPRLHFFMTSFAPVYGKGIIDCQAFSISDLTQQV 292
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KK 278
AKN+M C+ G++L+ A I+ G+ KK
Sbjct: 293 LDAKNIM-TCNHNQGKFLSSAIIYRGQQTEKK 323
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 110 bits (265), Expect = 7e-25
Identities = 52/109 (47%), Positives = 76/109 (69%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 433
RG+ + K+ EQ+ +++N++ + +E +P + VCDIP RGLK ++TFI N+TAIQ
Sbjct: 316 RGQQTEKKDAEQIISVENEDPSEMIESLPKSTNTDVCDIPSRGLKTSATFIANSTAIQEP 375
Query: 434 FKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQYQ 580
KR+S+QF +FRR AFLHWYT E + AE+ +NDLISE+QQY+
Sbjct: 376 LKRISKQFAGLFRRKAFLHWYTME---ESEFTDAENKVNDLISEFQQYE 421
Score = 72.9 bits (171), Expect = 2e-13
Identities = 39/92 (42%), Positives = 55/92 (59%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
SGITT RF G L D+RKL N PRLHF+ FAP+ +G +A ++ +LT Q+
Sbjct: 235 SGITTFQRFKGNLKTDIRKL--NTAGSPRLHFFMTSFAPVYGKGIIDCQAFSISDLTQQV 292
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KK 278
AKN+M C+ G++L+ A I+ G+ KK
Sbjct: 293 LDAKNIM-TCNHNQGKFLSSAIIYRGQQTEKK 323
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 91.1 bits (216), Expect = 6e-19
Identities = 41/103 (39%), Positives = 59/103 (57%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S IT LRF G LN DL + N+VP+PR+HF + PL S + AL+V ++T
Sbjct: 234 SSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISAEKAYHEALSVSDITNSC 293
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTSNWRIFRTK 311
F N MV CDPRHG+Y+ V ++ G+ + K + + +TK
Sbjct: 294 FEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTK 336
Score = 65.3 bits (152), Expect = 4e-11
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMASTFIG 409
RG + K+V+ +A I+ K + FV+W P K+ + PP + A +
Sbjct: 318 RGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLS 377
Query: 410 NTTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQYQDAT 589
NTTAI + R+ +F M+ + AF+HWY GEG + A DL + + Y++
Sbjct: 378 NTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAR---EDLAALEKDYEEVG 434
Query: 590 ADDEGSSTRKAEE 628
AD + EE
Sbjct: 435 ADSNEGGEEEGEE 447
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 91.1 bits (216), Expect = 6e-19
Identities = 41/103 (39%), Positives = 59/103 (57%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S IT LRF G LN DL + N+VP+PR+HF + PL S + AL+V ++T
Sbjct: 234 SSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISADKAYHEALSVNDITNSC 293
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTSNWRIFRTK 311
F N MV CDPRHG+Y+ V ++ G+ + K + + +TK
Sbjct: 294 FEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTK 336
Score = 66.9 bits (156), Expect = 1e-11
Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 9/134 (6%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMASTFIG 409
RG + K+V+ +A I+ K + FV+W P K+ + PP + A +
Sbjct: 318 RGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLS 377
Query: 410 NTTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQYQDAT 589
NTTAI + R+ +F M+ + AF+HWY GEG + A DL + + Y++
Sbjct: 378 NTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAR---EDLAALEKDYEEVG 434
Query: 590 AD-DEGSSTRKAEE 628
AD +EG + + EE
Sbjct: 435 ADSNEGGNEEEGEE 448
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 91.1 bits (216), Expect = 6e-19
Identities = 41/103 (39%), Positives = 59/103 (57%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S IT LRF G LN DL + N+VP+PR+HF + PL S + AL+V ++T
Sbjct: 234 SSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISADKAYHEALSVNDITNSC 293
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTSNWRIFRTK 311
F N MV CDPRHG+Y+ V ++ G+ + K + + +TK
Sbjct: 294 FEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTK 336
Score = 66.9 bits (156), Expect = 1e-11
Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 9/134 (6%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMASTFIG 409
RG + K+V+ +A I+ K + FV+W P K+ + PP + A +
Sbjct: 318 RGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLS 377
Query: 410 NTTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQYQDAT 589
NTTAI + R+ +F M+ + AF+HWY GEG + A DL + + Y++
Sbjct: 378 NTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAR---EDLAALEKDYEEVG 434
Query: 590 AD-DEGSSTRKAEE 628
AD +EG + + EE
Sbjct: 435 ADSNEGGNEEEGEE 448
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 91.1 bits (216), Expect = 6e-19
Identities = 41/103 (39%), Positives = 59/103 (57%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S IT LRF G LN DL + N+VP+PR+HF + PL S + AL+V ++T
Sbjct: 234 SSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISAEKAYHEALSVSDITNSC 293
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTSNWRIFRTK 311
F N MV CDPRHG+Y+ V ++ G+ + K + + +TK
Sbjct: 294 FEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTK 336
Score = 65.3 bits (152), Expect = 4e-11
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMASTFIG 409
RG + K+V+ +A I+ K + FV+W P K+ + PP + A +
Sbjct: 318 RGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLS 377
Query: 410 NTTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQYQDAT 589
NTTAI + R+ +F M+ + AF+HWY GEG + A DL + + Y++
Sbjct: 378 NTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAR---EDLAALEKDYEEVG 434
Query: 590 ADDEGSSTRKAEE 628
AD + EE
Sbjct: 435 ADSNEGGEEEGEE 447
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 90.6 bits (215), Expect = 8e-19
Identities = 42/103 (40%), Positives = 59/103 (57%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S IT LRF G LN DL + N+VP+PR+HF F+P+ S + L+V E+T
Sbjct: 236 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNMC 295
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTSNWRIFRTK 311
F N MV CDPRHG+Y+ V +F G+ + K + + +TK
Sbjct: 296 FEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTK 338
Score = 68.5 bits (160), Expect = 4e-12
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Frame = +2
Query: 242 CDDIRGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMAS 397
C RG + K+V+ +A I+ K S FV+W P K+ + PP + A
Sbjct: 316 CLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAV 375
Query: 398 TFIGNTTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQY 577
+ NTTAI + R+ +F M+ + AF+HWY GEG + A ++ L +Y++
Sbjct: 376 CMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV 435
Query: 578 QDATADDEG 604
+ +D G
Sbjct: 436 GVDSMEDNG 444
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 90.6 bits (215), Expect = 8e-19
Identities = 42/103 (40%), Positives = 59/103 (57%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S IT LRF G LN DL + N+VP+PR+HF F+P+ S + L+V E+T
Sbjct: 235 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNMC 294
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTSNWRIFRTK 311
F N MV CDPRHG+Y+ V +F G+ + K + + +TK
Sbjct: 295 FEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTK 337
Score = 68.5 bits (160), Expect = 4e-12
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Frame = +2
Query: 242 CDDIRGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMAS 397
C RG + K+V+ +A I+ K S FV+W P K+ + PP + A
Sbjct: 315 CLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAV 374
Query: 398 TFIGNTTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQY 577
+ NTTAI + R+ +F M+ + AF+HWY GEG + A ++ L +Y++
Sbjct: 375 CMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV 434
Query: 578 QDATADDEG 604
+ +D G
Sbjct: 435 GVDSMEDNG 443
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 90.6 bits (215), Expect = 8e-19
Identities = 42/103 (40%), Positives = 59/103 (57%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S IT LRF G LN DL + N+VP+PR+HF F+P+ S + L+V E+T
Sbjct: 236 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNMC 295
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTSNWRIFRTK 311
F N MV CDPRHG+Y+ V +F G+ + K + + +TK
Sbjct: 296 FEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTK 338
Score = 68.5 bits (160), Expect = 4e-12
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Frame = +2
Query: 242 CDDIRGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMAS 397
C RG + K+V+ +A I+ K S FV+W P K+ + PP + A
Sbjct: 316 CLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAV 375
Query: 398 TFIGNTTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQY 577
+ NTTAI + R+ +F M+ + AF+HWY GEG + A ++ L +Y++
Sbjct: 376 CMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV 435
Query: 578 QDATADDEG 604
+ +D G
Sbjct: 436 GVDSMEDNG 444
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 90.6 bits (215), Expect = 8e-19
Identities = 42/103 (40%), Positives = 59/103 (57%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S IT LRF G LN DL + N+VP+PR+HF F+P+ S + L+V E+T
Sbjct: 236 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNMC 295
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTSNWRIFRTK 311
F N MV CDPRHG+Y+ V +F G+ + K + + +TK
Sbjct: 296 FEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTK 338
Score = 68.5 bits (160), Expect = 4e-12
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Frame = +2
Query: 242 CDDIRGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMAS 397
C RG + K+V+ +A I+ K S FV+W P K+ + PP + A
Sbjct: 316 CLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAV 375
Query: 398 TFIGNTTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQY 577
+ NTTAI + R+ +F M+ + AF+HWY GEG + A ++ L +Y++
Sbjct: 376 CMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV 435
Query: 578 QDATADDEG 604
+ +D G
Sbjct: 436 GVDSMEDNG 444
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 87.8 bits (208), Expect = 6e-18
Identities = 40/103 (38%), Positives = 62/103 (60%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S IT LRF G LN DL + N+VP+PR+HF + PL S ++ L+V E+T
Sbjct: 233 SSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLVAYNPLISSAHHEF--LSVDEITKSC 290
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTSNWRIFRTK 311
F A N MV CDP+HG+Y+ V ++ G+ + K +++ + +T+
Sbjct: 291 FEASNQMVKCDPKHGKYMAVCLLYRGDVVPKDVSAAIKSIKTQ 333
Score = 66.9 bits (156), Expect = 1e-11
Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 9/126 (7%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR---GLKMAST-----FIG 409
RG + K+V + +I+ + S FV+W P K+ + PP G MA +
Sbjct: 315 RGDVVPKDVSAAIKSIKTQRSVQFVDWCPTGFKVGLNYQPPTVIPGGDMAKVPRAVCMLS 374
Query: 410 NTTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQY-QDA 586
NTTAI ++R+ +F M+ + AF+HWY GEG + A ++ L +Y++ D+
Sbjct: 375 NTTAIAEAWQRLDYKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADS 434
Query: 587 TADDEG 604
A+D G
Sbjct: 435 DANDNG 440
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 87.8 bits (208), Expect = 6e-18
Identities = 40/103 (38%), Positives = 59/103 (57%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S IT LRF G LN DL + N+VP+PR+HF + PL S + AL+V ++T
Sbjct: 234 SSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLASYTPLISAEKAYHEALSVNDITNSC 293
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTSNWRIFRTK 311
F N MV CDPR+G+Y+ V ++ G+ + K + + +TK
Sbjct: 294 FEPANQMVKCDPRNGKYMAVCLLYRGDVVPKDVNTAITAIKTK 336
Score = 63.7 bits (148), Expect = 1e-10
Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 8/133 (6%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMASTFIG 409
RG + K+V+ + I+ K S FV+W P K+ + PP + A +
Sbjct: 318 RGDVVPKDVNTAITAIKTKRSVQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLS 377
Query: 410 NTTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQYQDAT 589
NTTAI + R+ +F M+ + AF+HWY GEG + A DL + + Y++
Sbjct: 378 NTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAR---EDLAALEKDYEEVG 434
Query: 590 ADDEGSSTRKAEE 628
AD EE
Sbjct: 435 ADSNEGLEEDGEE 447
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 87.8 bits (208), Expect = 6e-18
Identities = 40/103 (38%), Positives = 59/103 (57%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S IT LRF G LN DL + N+VP+PR+HF + PL S + AL+V ++T
Sbjct: 234 SSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLASYTPLISAEKAYHEALSVNDITNSC 293
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTSNWRIFRTK 311
F N MV CDPR+G+Y+ V ++ G+ + K + + +TK
Sbjct: 294 FEPANQMVKCDPRNGKYMAVCLLYRGDVVPKDVNTAITAIKTK 336
Score = 63.7 bits (148), Expect = 1e-10
Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 8/133 (6%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMASTFIG 409
RG + K+V+ + I+ K S FV+W P K+ + PP + A +
Sbjct: 318 RGDVVPKDVNTAITAIKTKRSVQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLS 377
Query: 410 NTTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQYQDAT 589
NTTAI + R+ +F M+ + AF+HWY GEG + A DL + + Y++
Sbjct: 378 NTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAR---EDLAALEKDYEEVG 434
Query: 590 ADDEGSSTRKAEE 628
AD EE
Sbjct: 435 ADSNEGLEEDGEE 447
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 85.0 bits (201), Expect = 4e-17
Identities = 40/105 (38%), Positives = 60/105 (57%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 236 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVSEITNVC 295
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTSNWRIFRTKTA 317
F + MV CDPR+G+Y+ ++ G+ + K++ S +TK A
Sbjct: 296 FEPGSQMVKCDPRNGKYMACCLLYRGDVVPKEINSAISTIKTKRA 340
Score = 70.1 bits (164), Expect = 1e-12
Identities = 36/115 (31%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMASTFIG 409
RG + KE++ ++ I+ K + FV+W P K+ + PP L+ A +
Sbjct: 320 RGDVVPKEINSAISTIKTKRAIQFVDWCPTGFKVGINYQPPTVVPGGDMAKLQRAVCMLS 379
Query: 410 NTTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQ 574
NTTAIQ + R+ +F M+ + AF+HWY GEG + A +M L +Y++
Sbjct: 380 NTTAIQEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 434
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 83.0 bits (196), Expect = 2e-16
Identities = 38/103 (36%), Positives = 57/103 (55%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S +T LRF G LN DL + N+VP+PR+HF +AP+ S + +TV E+T Q
Sbjct: 241 SSVTASLRFDGALNVDLTEFQTNLVPYPRIHFPLTTYAPIISAEKAYHEQMTVAEITQQC 300
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTSNWRIFRTK 311
F MV CDPR G+Y+ ++ G+ + K + + +TK
Sbjct: 301 FEPGAQMVKCDPRRGKYMACCLLYRGDVVPKDVNAAIASVKTK 343
Score = 68.9 bits (161), Expect = 3e-12
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 9/125 (7%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMASTFIG 409
RG + K+V+ +A+++ K S FV+W P K+ + PP L+ A +
Sbjct: 325 RGDVVPKDVNAAIASVKTKRSIQFVDWCPTGFKVGINYQPPTVVPGADLSKLQRAVCMLS 384
Query: 410 NTTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQY-QDA 586
NTTAI + R+ +F M+ + AF+HWY GEG + A ++ L +Y++ DA
Sbjct: 385 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGLDA 444
Query: 587 TADDE 601
DE
Sbjct: 445 GEPDE 449
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 82.6 bits (195), Expect = 2e-16
Identities = 40/103 (38%), Positives = 56/103 (54%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S IT LRF G LN DL + N+VP+PR+HF +APL S + TV ++T
Sbjct: 242 SSITASLRFEGALNVDLTEFQTNLVPYPRIHFPLVTYAPLVSAERASHEQNTVSDMTHAC 301
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTSNWRIFRTK 311
F MV CDPR G+Y+ V ++ G+ + K + S +TK
Sbjct: 302 FEPGYQMVKCDPRRGKYMAVCLLYRGDVVPKDINSAIAAVKTK 344
Score = 70.1 bits (164), Expect = 1e-12
Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 10/138 (7%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR-------GLKMAST-FIG 409
RG + K+++ +A ++ K + FVEW P K+ + PP G + S I
Sbjct: 326 RGDVVPKDINSAIAAVKTKRTVQFVEWCPTGFKVGINYQPPTVVPGGDLGKQTRSVCMIS 385
Query: 410 NTTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQY-QDA 586
NTTAI + R+ +F M+ + AF+HWY GEG + A +M L +Y++ +D
Sbjct: 386 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEIGEDE 445
Query: 587 TADD-EGSSTRKAEEGLR 637
DD + S R G R
Sbjct: 446 LPDDIDDQSYRGRSSGSR 463
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 82.6 bits (195), Expect = 2e-16
Identities = 40/103 (38%), Positives = 56/103 (54%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S IT LRF G LN DL + N+VP+PR+HF +APL S + TV ++T
Sbjct: 214 SSITASLRFEGALNVDLTEFQTNLVPYPRIHFPLVTYAPLVSAERASHEQNTVSDMTHAC 273
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTSNWRIFRTK 311
F MV CDPR G+Y+ V ++ G+ + K + S +TK
Sbjct: 274 FEPGYQMVKCDPRRGKYMAVCLLYRGDVVPKDINSAIAAVKTK 316
Score = 70.1 bits (164), Expect = 1e-12
Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 10/138 (7%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR-------GLKMAST-FIG 409
RG + K+++ +A ++ K + FVEW P K+ + PP G + S I
Sbjct: 298 RGDVVPKDINSAIAAVKTKRTVQFVEWCPTGFKVGINYQPPTVVPGGDLGKQTRSVCMIS 357
Query: 410 NTTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQY-QDA 586
NTTAI + R+ +F M+ + AF+HWY GEG + A +M L +Y++ +D
Sbjct: 358 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEIGEDE 417
Query: 587 TADD-EGSSTRKAEEGLR 637
DD + S R G R
Sbjct: 418 LPDDIDDQSYRGRSSGSR 435
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 81.0 bits (191), Expect = 7e-16
Identities = 36/95 (37%), Positives = 54/95 (56%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + L+V ++T
Sbjct: 239 SSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLATYAPVISADRAHHEPLSVQDITHMC 298
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTS 287
F N MV CDP G+Y+ V ++ G+ + K + +
Sbjct: 299 FEKANQMVKCDPSAGKYMAVCLLYRGDVVPKDVNA 333
Score = 61.7 bits (143), Expect = 4e-10
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAV---CDIPPRGLKMAST-----FIG 409
RG + K+V+ +++++ K FV+W P K+ + I G +A +
Sbjct: 323 RGDVVPKDVNAAISSVKAKRGINFVDWCPTGFKVGINYQAPITVEGGDLAKVHRAVCMLS 382
Query: 410 NTTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQYQDAT 589
NTTAI + R+ +F M+ + AF+HW+ GEG + A ++ L +Y + T
Sbjct: 383 NTTAIAEAWARLDHKFDLMYSKRAFVHWFVGEGMEEGEFMEARDDLAALEKDYAEVSRDT 442
Query: 590 ADDE 601
AD E
Sbjct: 443 ADLE 446
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 44.0 bits (99), Expect = 9e-05
Identities = 23/75 (30%), Positives = 36/75 (48%)
Frame = +2
Query: 404 IGNTTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQYQD 583
+ +TTAI + R+ +F M+ + AF+HWY GEG + A DL + + Y++
Sbjct: 13 LSDTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAR---EDLAALEKDYEE 69
Query: 584 ATADDEGSSTRKAEE 628
AD EE
Sbjct: 70 VGADSNEGLEEDGEE 84
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = +3
Query: 12 TTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQMFXA 191
T RF + +R L ++ PFP +HF +P+ R +V ++T +
Sbjct: 242 TAPYRFNSAMCPSIRYL--DLAPFPPMHFIQSAISPVVDPNENFTRKTSVADVTRFLLKP 299
Query: 192 KNMMVACDPR 221
+MMV+ R
Sbjct: 300 TSMMVSTASR 309
>U53342-2|AAA96214.1| 272|Caenorhabditis elegans Suppressor of
activated let-60ras protein 7, isoform a protein.
Length = 272
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -3
Query: 249 SSQRSNTSRVE--DHTRPSCFWXRTFAASARVQLKLDTVE 136
SS ++ SR+E DH SC W + F S + +K+ E
Sbjct: 118 SSVKAKNSRLEKVDHVHASCEWPQGFTVSLKAYIKVGQTE 157
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = +3
Query: 12 TTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQMFXA 191
T RF + +R L ++ PFP +HF +P+ R +V ++T +
Sbjct: 242 TAPYRFNSAMCPSIRYL--DLAPFPPMHFIQSAISPVVDPNENFTRKTSVADVTRFLLKP 299
Query: 192 KNMMVACDPR 221
+MMV+ R
Sbjct: 300 TSMMVSTASR 309
>U53342-1|AAA96213.2| 371|Caenorhabditis elegans Suppressor of
activated let-60ras protein 7, isoform b protein.
Length = 371
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = -3
Query: 249 SSQRSNTSRVE--DHTRPSCFWXRTFAASARVQLKLD 145
SS ++ SR+E DH SC W + F S + +K++
Sbjct: 259 SSVKAKNSRLEKVDHVHASCEWPQGFTVSLKAYIKVE 295
>U20861-9|AAN84854.1| 192|Caenorhabditis elegans Hypothetical
protein C28H8.9b protein.
Length = 192
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 512 MKWSSRRAESNMNDLISEYQQYQDATADDEGSSTRK 619
+KW+SR+ E L Y ++Q ATA E T +
Sbjct: 15 IKWNSRQMEDRKKRLRFPYYEHQTATAQRESRFTTR 50
>U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical
protein C28H8.9a protein.
Length = 372
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 512 MKWSSRRAESNMNDLISEYQQYQDATADDEGSSTRK 619
+KW+SR+ E L Y ++Q ATA E T +
Sbjct: 15 IKWNSRQMEDRKKRLRFPYYEHQTATAQRESRFTTR 50
>AL024499-2|CAB54260.2| 242|Caenorhabditis elegans Hypothetical
protein H38K22.2b protein.
Length = 242
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -3
Query: 153 KLDTVELLATSAAQSQGCRNAGAETAPCSQPTSSDQRSAV 34
K + L A + A+S CRN ETA C QRS +
Sbjct: 104 KFHELYLFAFNYAKSAACRNLDLETAICCWDVLFGQRSTI 143
>AL024499-1|CAB54261.2| 295|Caenorhabditis elegans Hypothetical
protein H38K22.2a protein.
Length = 295
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -3
Query: 153 KLDTVELLATSAAQSQGCRNAGAETAPCSQPTSSDQRSAV 34
K + L A + A+S CRN ETA C QRS +
Sbjct: 157 KFHELYLFAFNYAKSAACRNLDLETAICCWDVLFGQRSTI 196
>U00066-4|AAM54165.2| 75|Caenorhabditis elegans Hypothetical
protein R12B2.7 protein.
Length = 75
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 39 LNADLRKLAVNMVPFPRLHFY 101
LN L L++N FP+LHFY
Sbjct: 41 LNDKLISLSINAFSFPKLHFY 61
>L23648-7|AAA28031.2| 962|Caenorhabditis elegans Abnormal cell
lineage protein 36 protein.
Length = 962
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 191 QKHDGRV*SSTREVFDRCDDIRGRMSMKEVDEQLANIQNKNS 316
++HD S RE +D R R+ +KE DEQ A + K S
Sbjct: 537 EEHDPTPESVEREPTVSPNDPRERLRLKERDEQFAKMVQKRS 578
>AF104917-1|AAD22772.1| 962|Caenorhabditis elegans LIN-36 protein.
Length = 962
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 191 QKHDGRV*SSTREVFDRCDDIRGRMSMKEVDEQLANIQNKNS 316
++HD S RE +D R R+ +KE DEQ A + K S
Sbjct: 537 EEHDPTPESVEREPTVSPNDPRERLRLKERDEQFAKMVQKRS 578
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,486,702
Number of Sequences: 27780
Number of extensions: 341304
Number of successful extensions: 1276
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1247
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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