Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0457
(647 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 201 4e-52
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 200 5e-52
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 200 5e-52
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 200 5e-52
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 200 6e-52
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 198 3e-51
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 198 3e-51
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 191 3e-49
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 190 5e-49
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 91 6e-19
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 91 8e-19
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 91 8e-19
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 84 9e-17
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 84 9e-17
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 84 9e-17
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 84 9e-17
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 61 5e-10
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 61 5e-10
At3g21420.1 68416.m02703 oxidoreductase, 2OG-Fe(II) oxygenase fa... 30 1.2
At1g44900.1 68414.m05144 DNA replication licensing factor, putat... 29 2.7
At3g24770.1 68416.m03109 CLE41, putative CLAVATA/ESR-Related 41 ... 27 8.1
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 201 bits (490), Expect = 4e-52
Identities = 91/127 (71%), Positives = 107/127 (84%), Gaps = 1/127 (0%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 433
RG+MS KEVDEQ+ NIQNKNS+YFVEWIPNN K +VCDIPP+GLKMA+TF+GN+T+IQ +
Sbjct: 319 RGQMSTKEVDEQILNIQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMAATFVGNSTSIQEM 378
Query: 434 FKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQYQDATADDEGS-S 610
F+RVSEQF AMFRR AFLHWYTGEG + AESNMNDL++EYQQYQDATAD+EG
Sbjct: 379 FRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADEEGEYD 438
Query: 611 TRKAEEG 631
+ EEG
Sbjct: 439 VEEEEEG 445
Score = 143 bits (346), Expect = 1e-34
Identities = 64/87 (73%), Positives = 75/87 (86%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
SG+T LRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQY +LTVPELT QM
Sbjct: 235 SGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM 294
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGE 263
+ +KNMM A DPRHGRYLT + IF G+
Sbjct: 295 WDSKNMMCAADPRHGRYLTASAIFRGQ 321
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 200 bits (489), Expect = 5e-52
Identities = 93/126 (73%), Positives = 104/126 (82%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 433
RG+MS KEVDEQ+ N+QNKNS+YFVEWIPNN K VCDIPP GLKMASTFIGN+T+IQ +
Sbjct: 318 RGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEM 377
Query: 434 FKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQYQDATADDEGSST 613
F+RVSEQF AMFRR AFLHWYTGEG + AESNMNDL+SEYQQYQDATAD+EG
Sbjct: 378 FRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEG-DY 436
Query: 614 RKAEEG 631
EEG
Sbjct: 437 EDEEEG 442
Score = 149 bits (360), Expect = 2e-36
Identities = 65/87 (74%), Positives = 77/87 (88%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
SG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQYR+LTVPELT QM
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQM 293
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGE 263
+ +KNMM A DPRHGRYLT + +F G+
Sbjct: 294 WDSKNMMCAADPRHGRYLTASAMFRGK 320
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 200 bits (489), Expect = 5e-52
Identities = 93/126 (73%), Positives = 104/126 (82%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 433
RG+MS KEVDEQ+ N+QNKNS+YFVEWIPNN K VCDIPP GLKMASTFIGN+T+IQ +
Sbjct: 318 RGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEM 377
Query: 434 FKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQYQDATADDEGSST 613
F+RVSEQF AMFRR AFLHWYTGEG + AESNMNDL+SEYQQYQDATAD+EG
Sbjct: 378 FRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEG-DY 436
Query: 614 RKAEEG 631
EEG
Sbjct: 437 EDEEEG 442
Score = 149 bits (360), Expect = 2e-36
Identities = 65/87 (74%), Positives = 77/87 (88%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
SG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQYR+LTVPELT QM
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQM 293
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGE 263
+ +KNMM A DPRHGRYLT + +F G+
Sbjct: 294 WDSKNMMCAADPRHGRYLTASAMFRGK 320
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 200 bits (489), Expect = 5e-52
Identities = 91/125 (72%), Positives = 103/125 (82%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 433
RG+MS KEVDEQ+ N+QNKNS+YFVEWIPNN K VCDIPP GLKMASTFIGN+T+IQ +
Sbjct: 318 RGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEM 377
Query: 434 FKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQYQDATADDEGSST 613
F+RVSEQF AMFRR AFLHWYTGEG + AESNMNDL+SEYQQYQDATAD+EG
Sbjct: 378 FRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEGEYE 437
Query: 614 RKAEE 628
+ E
Sbjct: 438 EEEAE 442
Score = 149 bits (360), Expect = 2e-36
Identities = 66/87 (75%), Positives = 76/87 (87%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
SG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQYR LTVPELT QM
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQM 293
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGE 263
+ AKNMM A DPRHGRYLT + +F G+
Sbjct: 294 WDAKNMMCAADPRHGRYLTASAMFRGK 320
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 200 bits (488), Expect = 6e-52
Identities = 91/125 (72%), Positives = 103/125 (82%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 433
RG+MS KEVDEQ+ N+QNKNS+YFVEWIPNN K +VCDI PRGL MASTFIGN+T+IQ +
Sbjct: 318 RGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPRGLSMASTFIGNSTSIQEM 377
Query: 434 FKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQYQDATADDEGSST 613
F+RVSEQF AMFRR AFLHWYTGEG + AESNMNDL+SEYQQYQDATADDEG
Sbjct: 378 FRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADDEGEYE 437
Query: 614 RKAEE 628
+E
Sbjct: 438 EDEDE 442
Score = 150 bits (363), Expect = 9e-37
Identities = 66/87 (75%), Positives = 77/87 (88%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
SG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQYRALTVPELT QM
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQM 293
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGE 263
+ +KNMM A DPRHGRYLT + +F G+
Sbjct: 294 WDSKNMMCAADPRHGRYLTASAMFRGK 320
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 198 bits (483), Expect = 3e-51
Identities = 88/125 (70%), Positives = 104/125 (83%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 433
RG+MS KEVDEQ+ N+QNKNS+YFVEWIPNN K +VCDIPP G+KMASTF+GN+T+IQ +
Sbjct: 319 RGKMSTKEVDEQILNVQNKNSSYFVEWIPNNVKSSVCDIPPTGIKMASTFVGNSTSIQEM 378
Query: 434 FKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQYQDATADDEGSST 613
F+RVSEQF AMFRR AFLHWYTGEG + AESNMNDL+SEYQQYQDATAD+E
Sbjct: 379 FRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEDEYD 438
Query: 614 RKAEE 628
+ E+
Sbjct: 439 EEEEQ 443
Score = 142 bits (345), Expect = 1e-34
Identities = 64/87 (73%), Positives = 75/87 (86%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
SG+T LRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQY +LTVPELT QM
Sbjct: 235 SGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM 294
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGE 263
+ AKNMM A DPRHGRYLT + +F G+
Sbjct: 295 WDAKNMMCAADPRHGRYLTASAMFRGK 321
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 198 bits (482), Expect = 3e-51
Identities = 89/116 (76%), Positives = 100/116 (86%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 433
RG+MS KEVDEQ+ N+QNKNS+YFVEWIPNN K VCDIPP GLKMASTFIGN+T+IQ +
Sbjct: 318 RGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEM 377
Query: 434 FKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQYQDATADDE 601
F+RVSEQF AMFRR AFLHWYTGEG + AESNMNDL+SEYQQYQDATAD+E
Sbjct: 378 FRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEE 433
Score = 151 bits (366), Expect = 4e-37
Identities = 67/87 (77%), Positives = 77/87 (88%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
SG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQYRALTVPELT QM
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQM 293
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGE 263
+ AKNMM A DPRHGRYLT + +F G+
Sbjct: 294 WDAKNMMCAADPRHGRYLTASAMFRGK 320
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 191 bits (466), Expect = 3e-49
Identities = 86/116 (74%), Positives = 100/116 (86%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 433
RG++S KEVDEQ+ NIQNKNS+YFVEWIPNN K +VCDI P+GLKMASTFIGN+T+IQ +
Sbjct: 318 RGKLSTKEVDEQMMNIQNKNSSYFVEWIPNNVKSSVCDIAPKGLKMASTFIGNSTSIQEM 377
Query: 434 FKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQYQDATADDE 601
F+RVSEQF AMFRR AFLHWYTGEG + AESNMNDL++EYQQYQDATA +E
Sbjct: 378 FRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATAGEE 433
Score = 148 bits (359), Expect = 3e-36
Identities = 67/105 (63%), Positives = 82/105 (78%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
SG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQY AL+VPELT QM
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQM 293
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTSNWRIFRTKTA 317
+ AKNMM A DPRHGRYLT + +F G+ K++ + K +
Sbjct: 294 WDAKNMMCAADPRHGRYLTASAVFRGKLSTKEVDEQMMNIQNKNS 338
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 190 bits (464), Expect = 5e-49
Identities = 87/125 (69%), Positives = 101/125 (80%)
Frame = +2
Query: 254 RGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 433
RG+MS KEVDEQ+ N+QNKNS+YFVEWIPNN K +VCDI P GLKMASTFIGN+T+IQ +
Sbjct: 318 RGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSVCDIAPTGLKMASTFIGNSTSIQEM 377
Query: 434 FKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQYQDATADDEGSST 613
F+RVSEQF AMFRR AFLHWYTGEG + AESNMNDL++EYQQYQDAT +E
Sbjct: 378 FRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATVGEEEYEE 437
Query: 614 RKAEE 628
+ EE
Sbjct: 438 DEEEE 442
Score = 148 bits (358), Expect = 4e-36
Identities = 65/87 (74%), Positives = 76/87 (87%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
SG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQY AL+VPELT QM
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQM 293
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGE 263
+ AKNMM A DPRHGRYLT + +F G+
Sbjct: 294 WDAKNMMCAADPRHGRYLTASAVFRGK 320
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 91.1 bits (216), Expect = 6e-19
Identities = 36/95 (37%), Positives = 57/95 (60%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S +TT LRF G +N D+ + N+VP+PR+HF +AP+ S + +VPE+T +
Sbjct: 236 SSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISSAKAYHEQFSVPEITTSV 295
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTS 287
F NMM CDPRHG+Y+ ++ G+ + K + +
Sbjct: 296 FEPSNMMAKCDPRHGKYMACCLMYRGDVVPKDVNT 330
Score = 68.1 bits (159), Expect = 5e-12
Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 8/128 (6%)
Frame = +2
Query: 242 CDDIRGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMAS 397
C RG + K+V+ +A I+ K + FV+W P K + PP ++ A
Sbjct: 316 CLMYRGDVVPKDVNTAVAAIKAKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAV 375
Query: 398 TFIGNTTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQY 577
I N TA+ +F R+ +F M+ + AF+HWY GEG + A ++ L +Y++
Sbjct: 376 CMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV 435
Query: 578 QDATADDE 601
A+D+
Sbjct: 436 GGEGAEDD 443
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 90.6 bits (215), Expect = 8e-19
Identities = 38/103 (36%), Positives = 61/103 (59%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S +TT LRF G +N D+ + N+VP+PR+HF +AP+ S + L+VPE+T +
Sbjct: 236 SSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAV 295
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTSNWRIFRTK 311
F +MM CDPRHG+Y+ ++ G+ + K + + +TK
Sbjct: 296 FEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTK 338
Score = 69.3 bits (162), Expect = 2e-12
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 8/128 (6%)
Frame = +2
Query: 242 CDDIRGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMAS 397
C RG + K+V+ + I+ K + FV+W P K + PP ++ A
Sbjct: 316 CLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAV 375
Query: 398 TFIGNTTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQY 577
I N TA+ +F R+ +F M+ + AF+HWY GEG + A ++ L +Y++
Sbjct: 376 CMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV 435
Query: 578 QDATADDE 601
DDE
Sbjct: 436 GAEGGDDE 443
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 90.6 bits (215), Expect = 8e-19
Identities = 38/103 (36%), Positives = 61/103 (59%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S +TT LRF G +N D+ + N+VP+PR+HF +AP+ S + L+VPE+T +
Sbjct: 236 SSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAV 295
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTSNWRIFRTK 311
F +MM CDPRHG+Y+ ++ G+ + K + + +TK
Sbjct: 296 FEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTK 338
Score = 69.3 bits (162), Expect = 2e-12
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 8/128 (6%)
Frame = +2
Query: 242 CDDIRGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMAS 397
C RG + K+V+ + I+ K + FV+W P K + PP ++ A
Sbjct: 316 CLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAV 375
Query: 398 TFIGNTTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQY 577
I N TA+ +F R+ +F M+ + AF+HWY GEG + A ++ L +Y++
Sbjct: 376 CMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV 435
Query: 578 QDATADDE 601
DDE
Sbjct: 436 GAEGGDDE 443
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 83.8 bits (198), Expect = 9e-17
Identities = 37/103 (35%), Positives = 58/103 (56%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S +T LRF G LN D+ + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 236 SSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSA 295
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTSNWRIFRTK 311
F +MM CDPRHG+Y+ ++ G+ + K + + +TK
Sbjct: 296 FEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTK 338
Score = 68.1 bits (159), Expect = 5e-12
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 8/128 (6%)
Frame = +2
Query: 242 CDDIRGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMAS 397
C RG + K+V+ + I+ K + FV+W P K + PP ++ A
Sbjct: 316 CLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAV 375
Query: 398 TFIGNTTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQY 577
I N+T++ +F R+ +F M+ + AF+HWY GEG + A ++ L +Y++
Sbjct: 376 CMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV 435
Query: 578 QDATADDE 601
DDE
Sbjct: 436 GAEGGDDE 443
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 83.8 bits (198), Expect = 9e-17
Identities = 37/103 (35%), Positives = 58/103 (56%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S +T LRF G LN D+ + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 236 SSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSA 295
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTSNWRIFRTK 311
F +MM CDPRHG+Y+ ++ G+ + K + + +TK
Sbjct: 296 FEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTK 338
Score = 30.7 bits (66), Expect = 0.87
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +2
Query: 242 CDDIRGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP 376
C RG + K+V+ + I+ K + FV+W P K + PP
Sbjct: 316 CLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPP 360
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 83.8 bits (198), Expect = 9e-17
Identities = 37/103 (35%), Positives = 58/103 (56%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S +T LRF G LN D+ + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 236 SSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSA 295
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTSNWRIFRTK 311
F +MM CDPRHG+Y+ ++ G+ + K + + +TK
Sbjct: 296 FEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTK 338
Score = 68.1 bits (159), Expect = 5e-12
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 8/128 (6%)
Frame = +2
Query: 242 CDDIRGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMAS 397
C RG + K+V+ + I+ K + FV+W P K + PP ++ A
Sbjct: 316 CLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAV 375
Query: 398 TFIGNTTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQY 577
I N+T++ +F R+ +F M+ + AF+HWY GEG + A ++ L +Y++
Sbjct: 376 CMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV 435
Query: 578 QDATADDE 601
DDE
Sbjct: 436 GAEGGDDE 443
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 83.8 bits (198), Expect = 9e-17
Identities = 37/103 (35%), Positives = 58/103 (56%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 182
S +T LRF G LN D+ + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 236 SSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSA 295
Query: 183 FXAKNMMVACDPRHGRYLTVATIFGGECL*KKLTSNWRIFRTK 311
F +MM CDPRHG+Y+ ++ G+ + K + + +TK
Sbjct: 296 FEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTK 338
Score = 68.1 bits (159), Expect = 5e-12
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 8/128 (6%)
Frame = +2
Query: 242 CDDIRGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMAS 397
C RG + K+V+ + I+ K + FV+W P K + PP ++ A
Sbjct: 316 CLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAV 375
Query: 398 TFIGNTTAIQTIFKRVSEQFVAMFRRXAFLHWYTGEGWMKWSSRRAESNMNDLISEYQQY 577
I N+T++ +F R+ +F M+ + AF+HWY GEG + A ++ L +Y++
Sbjct: 376 CMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV 435
Query: 578 QDATADDE 601
DDE
Sbjct: 436 GAEGGDDE 443
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 61.3 bits (142), Expect = 5e-10
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLT-SRGAQQYRALTVPELTLQ 179
S TT LR+PG +N DL L +++P PR HF G+ PLT R A R TV ++ +
Sbjct: 237 SASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRR 296
Query: 180 MFXAKNMMVACDPRH-----GRYLTVATIFGGE 263
+ KN+MV+ R+ +Y+++ I GE
Sbjct: 297 LLQTKNIMVSSYARNKEASQAKYISILNIIQGE 329
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 61.3 bits (142), Expect = 5e-10
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Frame = +3
Query: 3 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLT-SRGAQQYRALTVPELTLQ 179
S TT LR+PG +N DL L +++P PR HF G+ PLT R A R TV ++ +
Sbjct: 237 SASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRR 296
Query: 180 MFXAKNMMVACDPRH-----GRYLTVATIFGGE 263
+ KN+MV+ R+ +Y+++ I GE
Sbjct: 297 LLQTKNIMVSSYARNKEASQAKYISILNIIQGE 329
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/129 (20%), Positives = 57/129 (44%), Gaps = 3/129 (2%)
Frame = +2
Query: 119 ADVARSSTVSSFNCTRADAANVRXQKHDGRV*SSTREVFDRCDDIRGRMSMKEVDEQLAN 298
A+V R +TV N+ + +S + + I+G + +V E L
Sbjct: 282 ANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQR 341
Query: 299 IQNKNSTYFVEWIPNNCKIAVCDIPP---RGLKMASTFIGNTTAIQTIFKRVSEQFVAMF 469
I+ + F+EW P + ++A+ P +++ + + T+I+ +F + Q+ +
Sbjct: 342 IRERKLVNFIEWGPASIQVALSKKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYDKLR 401
Query: 470 RRXAFLHWY 496
++ AFL Y
Sbjct: 402 KKQAFLDNY 410
>At3g21420.1 68416.m02703 oxidoreductase, 2OG-Fe(II) oxygenase
family protein similar to SP|Q9ZWQ9 Flavonol synthase
(EC 1.14.11.-) {Citrus unshiu}; contains Pfam profile
PF03171: oxidoreductase, 2OG-Fe(II) oxygenase family
Length = 364
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 107 RGVEMQARKRHHVHSQLPQISVQLSRKP 24
RGV + + K HH+H Q+P I + KP
Sbjct: 39 RGVVVSSLKTHHLHHQIPVIDLSKLSKP 66
>At1g44900.1 68414.m05144 DNA replication licensing factor, putative
similar to DNA replication licensing factor MCM2 from
{Xenopus laevis} SP|P55861, SP|P49736 {Homo sapiens};
contains Pfam profile PF00493: MCM2/3/5 family
Length = 928
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +2
Query: 206 RV*SSTREVFDRCDDIRGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAV 361
R+ + RE R D++R ++ K D L ++ KN +E++PN C + +
Sbjct: 200 RIQGTLREWVMR-DEVRRFIAKKFKDFLLTYVKPKNENGDIEYVPNKCSLEI 250
>At3g24770.1 68416.m03109 CLE41, putative CLAVATA/ESR-Related 41
(CLE41)
Length = 99
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = -3
Query: 294 ASCSSTSFIDIRPRISSQRSNTSR 223
+S ++S +D+RP+ S++RS TSR
Sbjct: 56 SSVPASSTMDLRPKASTRRSRTSR 79
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,604,820
Number of Sequences: 28952
Number of extensions: 316282
Number of successful extensions: 1016
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1344285648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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