Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0455
(698 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 98 1e-21
SPAC24H6.01c ||SPAPB21F2.01|membrane bound O-acyltransferase, MB... 31 0.12
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 29 0.85
SPCC4F11.02 |ptc1||protein phosphatase 2C Ptc1|Schizosaccharomyc... 27 3.4
SPBC2A9.06c |||di-trans,poly-cis-decaprenylcistransferase|Schizo... 26 4.5
SPCC16C4.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 26 4.5
SPBC19F5.04 |||aspartate kinase |Schizosaccharomyces pombe|chr 2... 26 6.0
SPBP8B7.29 |||para-aminobenzoate synthase |Schizosaccharomyces p... 26 6.0
SPAC31G5.12c |maf1|n150|repressor of RNA polymerase III Maf1 |Sc... 26 6.0
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 97.9 bits (233), Expect = 1e-21
Identities = 60/165 (36%), Positives = 95/165 (57%), Gaps = 7/165 (4%)
Frame = +3
Query: 225 YLCSREGW*DA-EVVIIDMADPTNPIRRPISADSAIMNPASKVIALKGKAGVEAQKTLQI 401
Y+C R+ +VVI+D+ DP+N +RRPISADS I++P K+IALK AQ+ LQ+
Sbjct: 37 YVCVRDNPNGVNQVVIVDLEDPSNVLRRPISADSVILHPKKKIIALK------AQRQLQV 90
Query: 402 FNIEMKSKMKAHTMTEDIVFWKWISLNTLALVTKMSCTTGRWKATRHP*RCSTGIRRLPI 581
F++E K+K+ ++ M +D+V+W WIS + + +VT S W + S ++
Sbjct: 91 FDLEAKAKINSYVMNQDVVYWTWISDSVIGMVTDTS--VFHWTVSG-----SDPVKMFDR 143
Query: 582 ARSLTTGRI---RSNSGYCWSVFL---AQQNRVVGAMQLYSVERK 698
SL +I +SN W + ++ NR+ G +QLYS +RK
Sbjct: 144 HSSLNGTQIISYKSNYNEEWFTLIGISSRDNRIAGNLQLYSKKRK 188
Score = 59.7 bits (138), Expect = 4e-10
Identities = 26/42 (61%), Positives = 33/42 (78%)
Frame = +1
Query: 115 MAQVLPIRFQEHLQLTNVGINPASISFNTLTMESDKFICVRE 240
MAQ LPIRF E LQL +VGI P+S F +T+ESDK++CVR+
Sbjct: 1 MAQQLPIRFSEVLQLASVGIQPSSFGFANVTLESDKYVCVRD 42
>SPAC24H6.01c ||SPAPB21F2.01|membrane bound O-acyltransferase, MBOAT
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 588
Score = 31.5 bits (68), Expect = 0.12
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -1
Query: 539 SSRLPSTSGTRHLGDQSECVQ*NPLPENNVFGH-GVRLHFGFHLDVEDLKCF 387
SSRL STSG+ H S + +PE + FG +F L + + CF
Sbjct: 24 SSRLSSTSGSSHPSSSSRLTVRSAVPEKSAFGSIEFIFYFSVILSILTIACF 75
>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
Sum3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 28.7 bits (61), Expect = 0.85
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 492 ERVCSVKSTSRKQCLRSWCAP 430
E VC + SRK C RSW P
Sbjct: 266 ELVCQIHEESRKFCYRSWVRP 286
>SPCC4F11.02 |ptc1||protein phosphatase 2C Ptc1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 347
Score = 26.6 bits (56), Expect = 3.4
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +2
Query: 473 FTEHTRSGHQDVVYHWSMEGDSTPVKMFDRHSSLADCQIINYRTDPKQQWL 625
F+E++ SGH+ S +G++ P+ + + S + N R WL
Sbjct: 21 FSENSTSGHRKNASDHSADGETRPIAIEMKDSKGNTVPVGNSRPSKASNWL 71
>SPBC2A9.06c |||di-trans,
poly-cis-decaprenylcistransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 26.2 bits (55), Expect = 4.5
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -1
Query: 311 DWSSNWICWIC 279
DW+ NW+ W C
Sbjct: 22 DWAKNWVFWTC 32
>SPCC16C4.04 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 266
Score = 26.2 bits (55), Expect = 4.5
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -1
Query: 299 NWICWICHINNDNFCVSPTFSRTQINLSDSMVRVLK-EIEAGLIPTLVSCKCS 144
NWI I ++ N F +++ +L +LK E++ ++P LV+C CS
Sbjct: 87 NWI--ITYLENSEF-TKENYAQMINSLYRYQDAILKSELKDSILPKLVNCACS 136
>SPBC19F5.04 |||aspartate kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 519
Score = 25.8 bits (54), Expect = 6.0
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 342 SKVIALKGKAGVEAQKTLQIFNIEMKSKMKAH 437
S +A KG V + T+ + NI+ K+ AH
Sbjct: 341 SASLANKGATAVTIKDTIMVINIQSNRKISAH 372
>SPBP8B7.29 |||para-aminobenzoate synthase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 718
Score = 25.8 bits (54), Expect = 6.0
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 485 TRSGHQDVVYHWSMEGDSTPVKMFDRHSSLAD 580
T+ H ++YH G S +K+F SLAD
Sbjct: 167 TKFPHFGILYHPESVGSSKSLKIFKNFLSLAD 198
>SPAC31G5.12c |maf1|n150|repressor of RNA polymerase III Maf1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 215
Score = 25.8 bits (54), Expect = 6.0
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 548 KMFDRHSSLADCQIINYRTD 607
++ DRH +L+DC + +Y D
Sbjct: 121 EIIDRHINLSDCSVYSYTPD 140
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,959,998
Number of Sequences: 5004
Number of extensions: 64170
Number of successful extensions: 205
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 202
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 323158234
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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