Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0455
(698 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D21260-1|BAA04801.2| 1685|Homo sapiens KIAA0034 protein. 156 8e-38
BC054489-1|AAH54489.1| 1675|Homo sapiens clathrin, heavy chain (... 156 8e-38
BC051800-1|AAH51800.1| 1639|Homo sapiens CLTC protein protein. 156 8e-38
X95486-1|CAA64752.1| 1640|Homo sapiens clathrin heavy chain poly... 147 3e-35
U60803-1|AAB40909.1| 1569|Homo sapiens clathrin heavy chain 2 pr... 147 3e-35
U60802-1|AAB40908.1| 1626|Homo sapiens clathrin heavy chain 2 pr... 147 3e-35
U41763-1|AAC50494.1| 1640|Homo sapiens muscle clathrin heavy cha... 147 3e-35
BC035561-1|AAH35561.1| 493|Homo sapiens hexosaminidase (glycosy... 31 5.2
BC030541-1|AAH30541.1| 466|Homo sapiens WD repeat domain 1 prot... 31 5.2
BC002489-1|AAH02489.1| 606|Homo sapiens WD repeat domain 1 prot... 31 5.2
BC000201-1|AAH00201.1| 606|Homo sapiens WD repeat domain 1 prot... 31 5.2
AK222897-1|BAD96617.1| 606|Homo sapiens WD repeat-containing pr... 31 5.2
AK222764-1|BAD96484.1| 606|Homo sapiens WD repeat-containing pr... 31 5.2
AF020056-1|AAD05044.1| 606|Homo sapiens WDR1 protein protein. 31 5.2
AB209746-1|BAD92983.1| 624|Homo sapiens WD repeat-containing pr... 31 5.2
AB010427-1|BAA31855.2| 606|Homo sapiens NORI-1 protein. 31 5.2
>D21260-1|BAA04801.2| 1685|Homo sapiens KIAA0034 protein.
Length = 1685
Score = 156 bits (378), Expect = 8e-38
Identities = 90/159 (56%), Positives = 105/159 (66%), Gaps = 1/159 (0%)
Frame = +3
Query: 225 YLCSREGW*D-AEVVIIDMADPTNPIRRPISADSAIMNPASKVIALKGKAGVEAQKTLQI 401
++C RE + A+VVIIDM DP+NPIRRPISADSAIMNPASKVIALK A KTLQI
Sbjct: 47 FICIREKVGEQAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALK------AGKTLQI 100
Query: 402 FNIEMKSKMKAHTMTEDIVFWKWISLNTLALVTKMSCTTGRWKATRHP*RCSTGIRRLPI 581
FNIEMKSKMKAHTMT+D+ FWKWISLNT+ALVT + + P + L
Sbjct: 101 FNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAG 160
Query: 582 ARSLTTGRIRSNSGYCWSVFLAQQNRVVGAMQLYSVERK 698
+ + + AQQNRVVGAMQLYSV+RK
Sbjct: 161 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK 199
Score = 90.6 bits (215), Expect = 5e-18
Identities = 39/47 (82%), Positives = 42/47 (89%)
Frame = +2
Query: 503 DVVYHWSMEGDSTPVKMFDRHSSLADCQIINYRTDPKQQWLLLVGIS 643
+ VYHWSMEG+S PVKMFDRHSSLA CQIINYRTD KQ+WLLL GIS
Sbjct: 135 NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGIS 181
Score = 88.6 bits (210), Expect = 2e-17
Identities = 39/46 (84%), Positives = 44/46 (95%)
Frame = +1
Query: 115 MAQVLPIRFQEHLQLTNVGINPASISFNTLTMESDKFICVREKVGE 252
MAQ+LPIRFQEHLQL N+GINPA+I F+TLTMESDKFIC+REKVGE
Sbjct: 11 MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGE 56
>BC054489-1|AAH54489.1| 1675|Homo sapiens clathrin, heavy chain (Hc)
protein.
Length = 1675
Score = 156 bits (378), Expect = 8e-38
Identities = 90/159 (56%), Positives = 105/159 (66%), Gaps = 1/159 (0%)
Frame = +3
Query: 225 YLCSREGW*D-AEVVIIDMADPTNPIRRPISADSAIMNPASKVIALKGKAGVEAQKTLQI 401
++C RE + A+VVIIDM DP+NPIRRPISADSAIMNPASKVIALK A KTLQI
Sbjct: 37 FICIREKVGEQAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALK------AGKTLQI 90
Query: 402 FNIEMKSKMKAHTMTEDIVFWKWISLNTLALVTKMSCTTGRWKATRHP*RCSTGIRRLPI 581
FNIEMKSKMKAHTMT+D+ FWKWISLNT+ALVT + + P + L
Sbjct: 91 FNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAG 150
Query: 582 ARSLTTGRIRSNSGYCWSVFLAQQNRVVGAMQLYSVERK 698
+ + + AQQNRVVGAMQLYSV+RK
Sbjct: 151 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK 189
Score = 90.6 bits (215), Expect = 5e-18
Identities = 39/47 (82%), Positives = 42/47 (89%)
Frame = +2
Query: 503 DVVYHWSMEGDSTPVKMFDRHSSLADCQIINYRTDPKQQWLLLVGIS 643
+ VYHWSMEG+S PVKMFDRHSSLA CQIINYRTD KQ+WLLL GIS
Sbjct: 125 NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGIS 171
Score = 88.6 bits (210), Expect = 2e-17
Identities = 39/46 (84%), Positives = 44/46 (95%)
Frame = +1
Query: 115 MAQVLPIRFQEHLQLTNVGINPASISFNTLTMESDKFICVREKVGE 252
MAQ+LPIRFQEHLQL N+GINPA+I F+TLTMESDKFIC+REKVGE
Sbjct: 1 MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGE 46
>BC051800-1|AAH51800.1| 1639|Homo sapiens CLTC protein protein.
Length = 1639
Score = 156 bits (378), Expect = 8e-38
Identities = 90/159 (56%), Positives = 105/159 (66%), Gaps = 1/159 (0%)
Frame = +3
Query: 225 YLCSREGW*D-AEVVIIDMADPTNPIRRPISADSAIMNPASKVIALKGKAGVEAQKTLQI 401
++C RE + A+VVIIDM DP+NPIRRPISADSAIMNPASKVIALK A KTLQI
Sbjct: 37 FICIREKVGEQAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALK------AGKTLQI 90
Query: 402 FNIEMKSKMKAHTMTEDIVFWKWISLNTLALVTKMSCTTGRWKATRHP*RCSTGIRRLPI 581
FNIEMKSKMKAHTMT+D+ FWKWISLNT+ALVT + + P + L
Sbjct: 91 FNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAG 150
Query: 582 ARSLTTGRIRSNSGYCWSVFLAQQNRVVGAMQLYSVERK 698
+ + + AQQNRVVGAMQLYSV+RK
Sbjct: 151 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK 189
Score = 90.6 bits (215), Expect = 5e-18
Identities = 39/47 (82%), Positives = 42/47 (89%)
Frame = +2
Query: 503 DVVYHWSMEGDSTPVKMFDRHSSLADCQIINYRTDPKQQWLLLVGIS 643
+ VYHWSMEG+S PVKMFDRHSSLA CQIINYRTD KQ+WLLL GIS
Sbjct: 125 NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGIS 171
Score = 88.6 bits (210), Expect = 2e-17
Identities = 39/46 (84%), Positives = 44/46 (95%)
Frame = +1
Query: 115 MAQVLPIRFQEHLQLTNVGINPASISFNTLTMESDKFICVREKVGE 252
MAQ+LPIRFQEHLQL N+GINPA+I F+TLTMESDKFIC+REKVGE
Sbjct: 1 MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGE 46
>X95486-1|CAA64752.1| 1640|Homo sapiens clathrin heavy chain
polypeptide protein.
Length = 1640
Score = 147 bits (357), Expect = 3e-35
Identities = 86/162 (53%), Positives = 109/162 (67%), Gaps = 4/162 (2%)
Frame = +3
Query: 225 YLCSREGW*D-AEVVIIDMADPTNPIRRPISADSAIMNPASKVIALKGKAGVEAQKTLQI 401
++C RE + A+V IIDM+DP PIRRPISA+SAIMNPASKVIALK A KTLQI
Sbjct: 37 FICIREKVGEQAQVTIIDMSDPMAPIRRPISAESAIMNPASKVIALK------AGKTLQI 90
Query: 402 FNIEMKSKMKAHTMTEDIVFWKWISLNTLALVTKMSCTTGRWKATRHP*RCSTGIRRLPI 581
FNIEMKSKMKAHTM E+++FWKW+S+NT+ALVT+ + + P + L
Sbjct: 91 FNIEMKSKMKAHTMAEEVIFWKWVSVNTVALVTETAVYHWSMEGDSQPMKMFDRHTSLVG 150
Query: 582 ARSLTTGRIRSNSGYCWSVFL---AQQNRVVGAMQLYSVERK 698
+ + R++ W + + AQQNRVVGAMQLYSV+RK
Sbjct: 151 CQVI---HYRTDEYQKWLLLVGISAQQNRVVGAMQLYSVDRK 189
Score = 86.6 bits (205), Expect = 8e-17
Identities = 37/46 (80%), Positives = 43/46 (93%)
Frame = +1
Query: 115 MAQVLPIRFQEHLQLTNVGINPASISFNTLTMESDKFICVREKVGE 252
MAQ+LP+RFQEH QL N+GINPA+I F+TLTMESDKFIC+REKVGE
Sbjct: 1 MAQILPVRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGE 46
Score = 84.6 bits (200), Expect = 3e-16
Identities = 35/48 (72%), Positives = 41/48 (85%)
Frame = +2
Query: 500 QDVVYHWSMEGDSTPVKMFDRHSSLADCQIINYRTDPKQQWLLLVGIS 643
+ VYHWSMEGDS P+KMFDRH+SL CQ+I+YRTD Q+WLLLVGIS
Sbjct: 124 ETAVYHWSMEGDSQPMKMFDRHTSLVGCQVIHYRTDEYQKWLLLVGIS 171
>U60803-1|AAB40909.1| 1569|Homo sapiens clathrin heavy chain 2
protein.
Length = 1569
Score = 147 bits (357), Expect = 3e-35
Identities = 86/162 (53%), Positives = 109/162 (67%), Gaps = 4/162 (2%)
Frame = +3
Query: 225 YLCSREGW*D-AEVVIIDMADPTNPIRRPISADSAIMNPASKVIALKGKAGVEAQKTLQI 401
++C RE + A+V IIDM+DP PIRRPISA+SAIMNPASKVIALK A KTLQI
Sbjct: 37 FICIREKVGEQAQVTIIDMSDPMAPIRRPISAESAIMNPASKVIALK------AGKTLQI 90
Query: 402 FNIEMKSKMKAHTMTEDIVFWKWISLNTLALVTKMSCTTGRWKATRHP*RCSTGIRRLPI 581
FNIEMKSKMKAHTM E+++FWKW+S+NT+ALVT+ + + P + L
Sbjct: 91 FNIEMKSKMKAHTMAEEVIFWKWVSVNTVALVTETAVYHWSMEGDSQPMKMFDRHTSLVG 150
Query: 582 ARSLTTGRIRSNSGYCWSVFL---AQQNRVVGAMQLYSVERK 698
+ + R++ W + + AQQNRVVGAMQLYSV+RK
Sbjct: 151 CQVI---HYRTDEYQKWLLLVGISAQQNRVVGAMQLYSVDRK 189
Score = 86.6 bits (205), Expect = 8e-17
Identities = 37/46 (80%), Positives = 43/46 (93%)
Frame = +1
Query: 115 MAQVLPIRFQEHLQLTNVGINPASISFNTLTMESDKFICVREKVGE 252
MAQ+LP+RFQEH QL N+GINPA+I F+TLTMESDKFIC+REKVGE
Sbjct: 1 MAQILPVRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGE 46
Score = 84.6 bits (200), Expect = 3e-16
Identities = 35/48 (72%), Positives = 41/48 (85%)
Frame = +2
Query: 500 QDVVYHWSMEGDSTPVKMFDRHSSLADCQIINYRTDPKQQWLLLVGIS 643
+ VYHWSMEGDS P+KMFDRH+SL CQ+I+YRTD Q+WLLLVGIS
Sbjct: 124 ETAVYHWSMEGDSQPMKMFDRHTSLVGCQVIHYRTDEYQKWLLLVGIS 171
>U60802-1|AAB40908.1| 1626|Homo sapiens clathrin heavy chain 2
protein.
Length = 1626
Score = 147 bits (357), Expect = 3e-35
Identities = 86/162 (53%), Positives = 109/162 (67%), Gaps = 4/162 (2%)
Frame = +3
Query: 225 YLCSREGW*D-AEVVIIDMADPTNPIRRPISADSAIMNPASKVIALKGKAGVEAQKTLQI 401
++C RE + A+V IIDM+DP PIRRPISA+SAIMNPASKVIALK A KTLQI
Sbjct: 37 FICIREKVGEQAQVTIIDMSDPMAPIRRPISAESAIMNPASKVIALK------AGKTLQI 90
Query: 402 FNIEMKSKMKAHTMTEDIVFWKWISLNTLALVTKMSCTTGRWKATRHP*RCSTGIRRLPI 581
FNIEMKSKMKAHTM E+++FWKW+S+NT+ALVT+ + + P + L
Sbjct: 91 FNIEMKSKMKAHTMAEEVIFWKWVSVNTVALVTETAVYHWSMEGDSQPMKMFDRHTSLVG 150
Query: 582 ARSLTTGRIRSNSGYCWSVFL---AQQNRVVGAMQLYSVERK 698
+ + R++ W + + AQQNRVVGAMQLYSV+RK
Sbjct: 151 CQVI---HYRTDEYQKWLLLVGISAQQNRVVGAMQLYSVDRK 189
Score = 86.6 bits (205), Expect = 8e-17
Identities = 37/46 (80%), Positives = 43/46 (93%)
Frame = +1
Query: 115 MAQVLPIRFQEHLQLTNVGINPASISFNTLTMESDKFICVREKVGE 252
MAQ+LP+RFQEH QL N+GINPA+I F+TLTMESDKFIC+REKVGE
Sbjct: 1 MAQILPVRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGE 46
Score = 84.6 bits (200), Expect = 3e-16
Identities = 35/48 (72%), Positives = 41/48 (85%)
Frame = +2
Query: 500 QDVVYHWSMEGDSTPVKMFDRHSSLADCQIINYRTDPKQQWLLLVGIS 643
+ VYHWSMEGDS P+KMFDRH+SL CQ+I+YRTD Q+WLLLVGIS
Sbjct: 124 ETAVYHWSMEGDSQPMKMFDRHTSLVGCQVIHYRTDEYQKWLLLVGIS 171
>U41763-1|AAC50494.1| 1640|Homo sapiens muscle clathrin heavy chain
protein.
Length = 1640
Score = 147 bits (357), Expect = 3e-35
Identities = 86/162 (53%), Positives = 109/162 (67%), Gaps = 4/162 (2%)
Frame = +3
Query: 225 YLCSREGW*D-AEVVIIDMADPTNPIRRPISADSAIMNPASKVIALKGKAGVEAQKTLQI 401
++C RE + A+V IIDM+DP PIRRPISA+SAIMNPASKVIALK A KTLQI
Sbjct: 37 FICIREKVGEQAQVTIIDMSDPMAPIRRPISAESAIMNPASKVIALK------AGKTLQI 90
Query: 402 FNIEMKSKMKAHTMTEDIVFWKWISLNTLALVTKMSCTTGRWKATRHP*RCSTGIRRLPI 581
FNIEMKSKMKAHTM E+++FWKW+S+NT+ALVT+ + + P + L
Sbjct: 91 FNIEMKSKMKAHTMAEEVIFWKWVSVNTVALVTETAVYHWSMEGDSQPMKMFDRHTSLVG 150
Query: 582 ARSLTTGRIRSNSGYCWSVFL---AQQNRVVGAMQLYSVERK 698
+ + R++ W + + AQQNRVVGAMQLYSV+RK
Sbjct: 151 CQVI---HYRTDEYQKWLLLVGISAQQNRVVGAMQLYSVDRK 189
Score = 86.6 bits (205), Expect = 8e-17
Identities = 37/46 (80%), Positives = 43/46 (93%)
Frame = +1
Query: 115 MAQVLPIRFQEHLQLTNVGINPASISFNTLTMESDKFICVREKVGE 252
MAQ+LP+RFQEH QL N+GINPA+I F+TLTMESDKFIC+REKVGE
Sbjct: 1 MAQILPVRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGE 46
Score = 84.6 bits (200), Expect = 3e-16
Identities = 35/48 (72%), Positives = 41/48 (85%)
Frame = +2
Query: 500 QDVVYHWSMEGDSTPVKMFDRHSSLADCQIINYRTDPKQQWLLLVGIS 643
+ VYHWSMEGDS P+KMFDRH+SL CQ+I+YRTD Q+WLLLVGIS
Sbjct: 124 ETAVYHWSMEGDSQPMKMFDRHTSLVGCQVIHYRTDEYQKWLLLVGIS 171
>BC035561-1|AAH35561.1| 493|Homo sapiens hexosaminidase (glycosyl
hydrolase family 20, catalytic domain) containing
protein.
Length = 493
Score = 30.7 bits (66), Expect = 5.2
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = -3
Query: 660 PGFVEQEIPTSSNHCCFGSVL*LMIWQSASDECLSNIFTGVE-SPSIDQWYTTSW*PERV 484
P +P S + L + W++ + T S S W++TS P+R
Sbjct: 297 PSLAATSLPLSHKSASICAALWMRCWRATGMSLAGSAPTTASGSSSTRSWFSTSS-PQRS 355
Query: 483 CSVKSTSRKQCLRSWCAPSFWISSR 409
S S + C RSW P W+S+R
Sbjct: 356 ASWHSGA-PSC-RSWRLPCSWLSTR 378
>BC030541-1|AAH30541.1| 466|Homo sapiens WD repeat domain 1
protein.
Length = 466
Score = 30.7 bits (66), Expect = 5.2
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 437 HHDRRHCFLEVDFTEHTRSGHQDV-VYHWSMEGDSTPVKMFDRH 565
HH + C EH SG D+ VY W++ T VK+ D H
Sbjct: 391 HHAKIVCLAWSPDNEHFASGGMDMMVYVWTLSDPETRVKIQDAH 434
>BC002489-1|AAH02489.1| 606|Homo sapiens WD repeat domain 1
protein.
Length = 606
Score = 30.7 bits (66), Expect = 5.2
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 437 HHDRRHCFLEVDFTEHTRSGHQDV-VYHWSMEGDSTPVKMFDRH 565
HH + C EH SG D+ VY W++ T VK+ D H
Sbjct: 531 HHAKIVCLAWSPDNEHFASGGMDMMVYVWTLSDPETRVKIQDAH 574
>BC000201-1|AAH00201.1| 606|Homo sapiens WD repeat domain 1
protein.
Length = 606
Score = 30.7 bits (66), Expect = 5.2
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 437 HHDRRHCFLEVDFTEHTRSGHQDV-VYHWSMEGDSTPVKMFDRH 565
HH + C EH SG D+ VY W++ T VK+ D H
Sbjct: 531 HHAKIVCLAWSPDNEHFASGGMDMMVYVWTLSDPETRVKIQDAH 574
>AK222897-1|BAD96617.1| 606|Homo sapiens WD repeat-containing
protein 1 isoform 1 variant protein.
Length = 606
Score = 30.7 bits (66), Expect = 5.2
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 437 HHDRRHCFLEVDFTEHTRSGHQDV-VYHWSMEGDSTPVKMFDRH 565
HH + C EH SG D+ VY W++ T VK+ D H
Sbjct: 531 HHAKIVCLAWSPDNEHFASGGMDMMVYVWTLSDPETRVKIQDAH 574
>AK222764-1|BAD96484.1| 606|Homo sapiens WD repeat-containing
protein 1 isoform 1 variant protein.
Length = 606
Score = 30.7 bits (66), Expect = 5.2
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 437 HHDRRHCFLEVDFTEHTRSGHQDV-VYHWSMEGDSTPVKMFDRH 565
HH + C EH SG D+ VY W++ T VK+ D H
Sbjct: 531 HHAKIVCLAWSPDNEHFASGGMDMMVYVWTLSDPETRVKIQDAH 574
>AF020056-1|AAD05044.1| 606|Homo sapiens WDR1 protein protein.
Length = 606
Score = 30.7 bits (66), Expect = 5.2
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 437 HHDRRHCFLEVDFTEHTRSGHQDV-VYHWSMEGDSTPVKMFDRH 565
HH + C EH SG D+ VY W++ T VK+ D H
Sbjct: 531 HHAKIVCLAWSPDNEHFASGGMDMMVYVWTLSDPETRVKIQDAH 574
>AB209746-1|BAD92983.1| 624|Homo sapiens WD repeat-containing
protein 1 isoform 1 variant protein.
Length = 624
Score = 30.7 bits (66), Expect = 5.2
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 437 HHDRRHCFLEVDFTEHTRSGHQDV-VYHWSMEGDSTPVKMFDRH 565
HH + C EH SG D+ VY W++ T VK+ D H
Sbjct: 549 HHAKIVCLAWSPDNEHFASGGMDMMVYVWTLSDPETRVKIQDAH 592
>AB010427-1|BAA31855.2| 606|Homo sapiens NORI-1 protein.
Length = 606
Score = 30.7 bits (66), Expect = 5.2
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 437 HHDRRHCFLEVDFTEHTRSGHQDV-VYHWSMEGDSTPVKMFDRH 565
HH + C EH SG D+ VY W++ T VK+ D H
Sbjct: 531 HHAKIVCLAWSPDNEHFASGGMDMMVYVWTLSDPETRVKIQDAH 574
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,030,249
Number of Sequences: 237096
Number of extensions: 2310622
Number of successful extensions: 12589
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 12407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12573
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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