Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0453
(661 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99758-1|CAI22851.1| 376|Homo sapiens non-metastatic cells 7, p... 55 2e-07
BC006983-1|AAH06983.1| 376|Homo sapiens non-metastatic cells 7,... 55 2e-07
AL356852-1|CAI19238.1| 376|Homo sapiens non-metastatic cells 7,... 55 2e-07
AL031726-1|CAI18887.1| 376|Homo sapiens non-metastatic cells 7,... 55 2e-07
AF153191-1|AAD34622.1| 376|Homo sapiens nm23-H7 protein. 55 2e-07
AB209049-1|BAD92286.1| 283|Homo sapiens nucleoside-diphosphate ... 55 2e-07
BC067808-1|AAH67808.1| 366|Homo sapiens PVRL3 protein protein. 30 8.4
AK075105-1|BAC11404.1| 267|Homo sapiens protein ( Homo sapiens ... 30 8.4
AF282874-1|AAF97597.1| 549|Homo sapiens nectin 3 protein. 30 8.4
>Z99758-1|CAI22851.1| 376|Homo sapiens non-metastatic cells 7,
protein expressed in (nucleoside-diphosphate kinase)
protein.
Length = 376
Score = 55.2 bits (127), Expect = 2e-07
Identities = 26/71 (36%), Positives = 44/71 (61%)
Frame = +3
Query: 255 DKYSFLCEMYDEDADEIKDLTLNYFPFDNSVQIIDAKKGKNVLKRVQLPPLNLDMLQIGN 434
+++ F+ E YD +A ++ L ++P D SV++ D K + LKR + L+L+ L IGN
Sbjct: 5 ERFVFIAEWYDPNASLLRRYELLFYPGDGSVEMHDVKNHRTFLKRTKYDNLHLEDLFIGN 64
Query: 435 IVNIFSKLLYI 467
VN+FS+ L +
Sbjct: 65 KVNVFSRQLVL 75
>BC006983-1|AAH06983.1| 376|Homo sapiens non-metastatic cells 7,
protein expressed in (nucleoside-diphosphate kinase)
protein.
Length = 376
Score = 55.2 bits (127), Expect = 2e-07
Identities = 26/71 (36%), Positives = 44/71 (61%)
Frame = +3
Query: 255 DKYSFLCEMYDEDADEIKDLTLNYFPFDNSVQIIDAKKGKNVLKRVQLPPLNLDMLQIGN 434
+++ F+ E YD +A ++ L ++P D SV++ D K + LKR + L+L+ L IGN
Sbjct: 5 ERFVFIAEWYDPNASLLRRYELLFYPGDGSVEMHDVKNHRTFLKRTKYDNLHLEDLFIGN 64
Query: 435 IVNIFSKLLYI 467
VN+FS+ L +
Sbjct: 65 KVNVFSRQLVL 75
>AL356852-1|CAI19238.1| 376|Homo sapiens non-metastatic cells 7,
protein expressed in (nucleoside-diphosphate kinase)
protein.
Length = 376
Score = 55.2 bits (127), Expect = 2e-07
Identities = 26/71 (36%), Positives = 44/71 (61%)
Frame = +3
Query: 255 DKYSFLCEMYDEDADEIKDLTLNYFPFDNSVQIIDAKKGKNVLKRVQLPPLNLDMLQIGN 434
+++ F+ E YD +A ++ L ++P D SV++ D K + LKR + L+L+ L IGN
Sbjct: 5 ERFVFIAEWYDPNASLLRRYELLFYPGDGSVEMHDVKNHRTFLKRTKYDNLHLEDLFIGN 64
Query: 435 IVNIFSKLLYI 467
VN+FS+ L +
Sbjct: 65 KVNVFSRQLVL 75
>AL031726-1|CAI18887.1| 376|Homo sapiens non-metastatic cells 7,
protein expressed in (nucleoside-diphosphate kinase)
protein.
Length = 376
Score = 55.2 bits (127), Expect = 2e-07
Identities = 26/71 (36%), Positives = 44/71 (61%)
Frame = +3
Query: 255 DKYSFLCEMYDEDADEIKDLTLNYFPFDNSVQIIDAKKGKNVLKRVQLPPLNLDMLQIGN 434
+++ F+ E YD +A ++ L ++P D SV++ D K + LKR + L+L+ L IGN
Sbjct: 5 ERFVFIAEWYDPNASLLRRYELLFYPGDGSVEMHDVKNHRTFLKRTKYDNLHLEDLFIGN 64
Query: 435 IVNIFSKLLYI 467
VN+FS+ L +
Sbjct: 65 KVNVFSRQLVL 75
>AF153191-1|AAD34622.1| 376|Homo sapiens nm23-H7 protein.
Length = 376
Score = 55.2 bits (127), Expect = 2e-07
Identities = 26/71 (36%), Positives = 44/71 (61%)
Frame = +3
Query: 255 DKYSFLCEMYDEDADEIKDLTLNYFPFDNSVQIIDAKKGKNVLKRVQLPPLNLDMLQIGN 434
+++ F+ E YD +A ++ L ++P D SV++ D K + LKR + L+L+ L IGN
Sbjct: 5 ERFVFIAEWYDPNASLLRRYELLFYPGDGSVEMHDVKNHRTFLKRTKYDNLHLEDLFIGN 64
Query: 435 IVNIFSKLLYI 467
VN+FS+ L +
Sbjct: 65 KVNVFSRQLVL 75
>AB209049-1|BAD92286.1| 283|Homo sapiens nucleoside-diphosphate
kinase 7 isoform a variant protein.
Length = 283
Score = 55.2 bits (127), Expect = 2e-07
Identities = 26/71 (36%), Positives = 44/71 (61%)
Frame = +3
Query: 255 DKYSFLCEMYDEDADEIKDLTLNYFPFDNSVQIIDAKKGKNVLKRVQLPPLNLDMLQIGN 434
+++ F+ E YD +A ++ L ++P D SV++ D K + LKR + L+L+ L IGN
Sbjct: 9 ERFVFIAEWYDPNASLLRRYELLFYPGDGSVEMHDVKNHRTFLKRTKYDNLHLEDLFIGN 68
Query: 435 IVNIFSKLLYI 467
VN+FS+ L +
Sbjct: 69 KVNVFSRQLVL 79
>BC067808-1|AAH67808.1| 366|Homo sapiens PVRL3 protein protein.
Length = 366
Score = 29.9 bits (64), Expect = 8.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 442 IYFXNYYISRXALLLHGKRFSKSAKYIC 525
+ F NY ++ + LH FS S KYIC
Sbjct: 121 VLFKNYSLNDATITLHNIGFSDSGKYIC 148
>AK075105-1|BAC11404.1| 267|Homo sapiens protein ( Homo sapiens
cDNA FLJ90624 fis, clone PLACE1002911, weakly similar to
POLIOVIRUS RECEPTOR HOMOLOG PRECURSOR. ).
Length = 267
Score = 29.9 bits (64), Expect = 8.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 442 IYFXNYYISRXALLLHGKRFSKSAKYIC 525
+ F NY ++ + LH FS S KYIC
Sbjct: 98 VLFKNYSLNDATITLHNIGFSDSGKYIC 125
>AF282874-1|AAF97597.1| 549|Homo sapiens nectin 3 protein.
Length = 549
Score = 29.9 bits (64), Expect = 8.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 442 IYFXNYYISRXALLLHGKRFSKSAKYIC 525
+ F NY ++ + LH FS S KYIC
Sbjct: 121 VLFKNYSLNDATITLHNIGFSDSGKYIC 148
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,762,060
Number of Sequences: 237096
Number of extensions: 1286993
Number of successful extensions: 2565
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2565
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -