Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0447
(748 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5 pr... 187 4e-47
BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5 pr... 187 4e-47
AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5 pr... 187 4e-47
AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5 va... 184 3e-46
U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5 prot... 183 7e-46
AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5 va... 84 6e-16
AB007149-1|BAA25815.1| 55|Homo sapiens ribosomal protein S5 pr... 36 0.15
L12398-1|AAB59386.1| 467|Homo sapiens dopamine receptor D4 prot... 31 3.3
L12397-1|AAL58637.1| 350|Homo sapiens Dopamine D4 receptor prot... 31 3.3
AB065765-1|BAC05985.1| 419|Homo sapiens seven transmembrane hel... 31 3.3
M83664-1|AAA59837.1| 258|Homo sapiens HLA-DPB1 protein. 31 4.4
M28200-1|AAA53195.1| 258|Homo sapiens MHC class II lymphocyte a... 31 4.4
BT019780-1|AAV38583.1| 258|Homo sapiens major histocompatibilit... 31 4.4
BC013184-1|AAH13184.1| 258|Homo sapiens HLA-DPB1 protein protein. 31 4.4
AY804143-1|AAW78748.1| 258|Homo sapiens MHC class II antigen pr... 31 4.4
AY804133-1|AAW78738.1| 258|Homo sapiens MHC class II antigen pr... 31 4.4
AY804141-1|AAW78746.1| 258|Homo sapiens MHC class II antigen pr... 30 7.7
>BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 187 bits (455), Expect = 4e-47
Identities = 97/136 (71%), Positives = 103/136 (75%)
Frame = +2
Query: 260 KRFRKAQXPIVEXXTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIIN 439
KRFRKAQ PIVE TNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIIN
Sbjct: 59 KRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIIN 118
Query: 440 SGPREDSTRIGRAGTVRRQAVDVHPCXESTKQSGLLCTGAREGCIQKY*XNRRVCCR*IN 619
SGPREDSTRIGRAGTVRRQAVDV P + LLCTGARE + C
Sbjct: 119 SGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNI-KTIAECLADEL 177
Query: 620 LMQLRGSSNSYAIKKE 667
+ +GSSNSYAIKK+
Sbjct: 178 INAAKGSSNSYAIKKK 193
Score = 85.4 bits (202), Expect = 2e-16
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = +3
Query: 111 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRY 254
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRY
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRY 56
>BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 187 bits (455), Expect = 4e-47
Identities = 97/136 (71%), Positives = 103/136 (75%)
Frame = +2
Query: 260 KRFRKAQXPIVEXXTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIIN 439
KRFRKAQ PIVE TNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIIN
Sbjct: 59 KRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIIN 118
Query: 440 SGPREDSTRIGRAGTVRRQAVDVHPCXESTKQSGLLCTGAREGCIQKY*XNRRVCCR*IN 619
SGPREDSTRIGRAGTVRRQAVDV P + LLCTGARE + C
Sbjct: 119 SGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNI-KTIAECLADEL 177
Query: 620 LMQLRGSSNSYAIKKE 667
+ +GSSNSYAIKK+
Sbjct: 178 INAAKGSSNSYAIKKK 193
Score = 85.4 bits (202), Expect = 2e-16
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = +3
Query: 111 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRY 254
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRY
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRY 56
>AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 187 bits (455), Expect = 4e-47
Identities = 97/136 (71%), Positives = 103/136 (75%)
Frame = +2
Query: 260 KRFRKAQXPIVEXXTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIIN 439
KRFRKAQ PIVE TNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIIN
Sbjct: 59 KRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIIN 118
Query: 440 SGPREDSTRIGRAGTVRRQAVDVHPCXESTKQSGLLCTGAREGCIQKY*XNRRVCCR*IN 619
SGPREDSTRIGRAGTVRRQAVDV P + LLCTGARE + C
Sbjct: 119 SGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNI-KTIAECLADEL 177
Query: 620 LMQLRGSSNSYAIKKE 667
+ +GSSNSYAIKK+
Sbjct: 178 INAAKGSSNSYAIKKK 193
Score = 85.4 bits (202), Expect = 2e-16
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = +3
Query: 111 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRY 254
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRY
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRY 56
>AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5
variant protein.
Length = 204
Score = 184 bits (448), Expect = 3e-46
Identities = 96/135 (71%), Positives = 101/135 (74%)
Frame = +2
Query: 260 KRFRKAQXPIVEXXTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIIN 439
KRFRKAQ PIVE TNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIIN
Sbjct: 59 KRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIIN 118
Query: 440 SGPREDSTRIGRAGTVRRQAVDVHPCXESTKQSGLLCTGAREGCIQKY*XNRRVCCR*IN 619
SGPREDSTRIGRAGTVRRQAVDV P + LLCTGARE + C
Sbjct: 119 SGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNI-KTIAECLADEL 177
Query: 620 LMQLRGSSNSYAIKK 664
+ +GSSN YAIKK
Sbjct: 178 INAAKGSSNFYAIKK 192
Score = 85.4 bits (202), Expect = 2e-16
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = +3
Query: 111 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRY 254
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRY
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRY 56
Score = 30.7 bits (66), Expect = 5.8
Identities = 26/64 (40%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = +1
Query: 511 PLXRVNQAIWAFVHRCT*GLHSEILXQSQSVLQM---N*FNAAKGFI*LLRHQKRRXELE 681
PL RVNQAIW CT G +++ + NAAKG K+R ELE
Sbjct: 143 PLRRVNQAIWLL---CT-GAREAAFRNIKTIAECLADELINAAKGSSNFYAI-KKRDELE 197
Query: 682 RVAK 693
RVAK
Sbjct: 198 RVAK 201
>U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 183 bits (445), Expect = 7e-46
Identities = 95/134 (70%), Positives = 101/134 (75%)
Frame = +2
Query: 266 FRKAQXPIVEXXTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSG 445
FRKAQ PIVE TNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSG
Sbjct: 61 FRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSG 120
Query: 446 PREDSTRIGRAGTVRRQAVDVHPCXESTKQSGLLCTGAREGCIQKY*XNRRVCCR*INLM 625
PREDSTRIGRAGTVRRQAVDV P + LLCTGARE + C +
Sbjct: 121 PREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNI-KTIAECLADELIN 179
Query: 626 QLRGSSNSYAIKKE 667
+GSSNSYAIKK+
Sbjct: 180 AAKGSSNSYAIKKK 193
Score = 85.4 bits (202), Expect = 2e-16
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = +3
Query: 111 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRY 254
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRY
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRY 56
>AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5
variant protein.
Length = 107
Score = 83.8 bits (198), Expect = 6e-16
Identities = 42/52 (80%), Positives = 43/52 (82%)
Frame = +2
Query: 275 AQXPIVEXXTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 430
AQ PIVE TNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE L LV A
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52
>AB007149-1|BAA25815.1| 55|Homo sapiens ribosomal protein S5
protein.
Length = 55
Score = 35.9 bits (79), Expect = 0.15
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +3
Query: 567 AAFRNIXTIAECVADELI 620
AAFRNI TIAEC+ADELI
Sbjct: 12 AAFRNIKTIAECLADELI 29
Score = 32.7 bits (71), Expect = 1.4
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = +2
Query: 542 LLCTGAREGCIQKY*XNRRVCCR*INLMQLRGSSNSYAIKKE 667
LLCTGARE + C + +GSSNSYAIKK+
Sbjct: 4 LLCTGAREAAFRNI-KTIAECLADELINAAKGSSNSYAIKKK 44
>L12398-1|AAB59386.1| 467|Homo sapiens dopamine receptor D4
protein.
Length = 467
Score = 31.5 bits (68), Expect = 3.3
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = -2
Query: 447 GPELIMAVTSTCRGF-SPVNK*IISNACLTIRTAISFLPLFRPCIIREFVXXSTIGXWAL 271
G L+ +T R +P N I+S A + A+ LPLF + E G W L
Sbjct: 51 GNSLVCVSVATERALQTPTNSFIVSLAAADLLLALLVLPLF---VYSEVQG----GAWLL 103
Query: 270 RKRLCDTCQLNEVNILRTSL*RKCS 196
RLCD +V + S+ C+
Sbjct: 104 SPRLCDALMAMDVMLCTASIFNLCA 128
>L12397-1|AAL58637.1| 350|Homo sapiens Dopamine D4 receptor
protein.
Length = 350
Score = 31.5 bits (68), Expect = 3.3
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = -2
Query: 447 GPELIMAVTSTCRGF-SPVNK*IISNACLTIRTAISFLPLFRPCIIREFVXXSTIGXWAL 271
G L+ +T R +P N I+S A + A+ LPLF + E G W L
Sbjct: 51 GNSLVCVSVATERALQTPTNSFIVSLAAADLLLALLVLPLF---VYSEVQG----GAWLL 103
Query: 270 RKRLCDTCQLNEVNILRTSL*RKCS 196
RLCD +V + S+ C+
Sbjct: 104 SPRLCDALMAMDVMLCTASIFNLCA 128
>AB065765-1|BAC05985.1| 419|Homo sapiens seven transmembrane helix
receptor protein.
Length = 419
Score = 31.5 bits (68), Expect = 3.3
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = -2
Query: 447 GPELIMAVTSTCRGF-SPVNK*IISNACLTIRTAISFLPLFRPCIIREFVXXSTIGXWAL 271
G L+ +T R +P N I+S A + A+ LPLF + E G W L
Sbjct: 51 GNSLVCVSVATERALQTPTNSFIVSLAAADLLLALLVLPLF---VYSEVQG----GAWLL 103
Query: 270 RKRLCDTCQLNEVNILRTSL*RKCS 196
RLCD +V + S+ C+
Sbjct: 104 SPRLCDALMAMDVMLCTASIFNLCA 128
>M83664-1|AAA59837.1| 258|Homo sapiens HLA-DPB1 protein.
Length = 258
Score = 31.1 bits (67), Expect = 4.4
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +3
Query: 69 VAEAGSVVVETMSLPQAADIPEIKLF-GRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSA 245
VA ++V S+ Q PE ++ GR CY + L+ YI +E+YA++
Sbjct: 13 VALTALLMVLLTSVVQGRATPENYVYQGRQECYAFNGTQRFLERYIYNREEYARF-DSDV 71
Query: 246 GRYHTSVSV-KPXAQSWS 296
G + + +P A+ W+
Sbjct: 72 GEFRAVTELGRPAAEYWN 89
>M28200-1|AAA53195.1| 258|Homo sapiens MHC class II lymphocyte
antigen beta chain protein.
Length = 258
Score = 31.1 bits (67), Expect = 4.4
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +3
Query: 69 VAEAGSVVVETMSLPQAADIPEIKLF-GRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSA 245
VA ++V S+ Q PE ++ GR CY + L+ YI +E+YA++
Sbjct: 13 VALTALLMVLLTSVVQGRATPENYVYQGRQECYAFNGTQRFLERYIYNREEYARF-DSDV 71
Query: 246 GRYHTSVSV-KPXAQSWS 296
G + + +P A+ W+
Sbjct: 72 GEFRAVTELGRPAAEYWN 89
>BT019780-1|AAV38583.1| 258|Homo sapiens major histocompatibility
complex, class II, DP beta 1 protein.
Length = 258
Score = 31.1 bits (67), Expect = 4.4
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +3
Query: 69 VAEAGSVVVETMSLPQAADIPEIKLF-GRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSA 245
VA ++V S+ Q PE ++ GR CY + L+ YI +E+YA++
Sbjct: 13 VALTALLMVLLTSVVQGRATPENYVYQGRQECYAFNGTQRFLERYIYNREEYARF-DSDV 71
Query: 246 GRYHTSVSV-KPXAQSWS 296
G + + +P A+ W+
Sbjct: 72 GEFRAVTELGRPAAEYWN 89
>BC013184-1|AAH13184.1| 258|Homo sapiens HLA-DPB1 protein protein.
Length = 258
Score = 31.1 bits (67), Expect = 4.4
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +3
Query: 69 VAEAGSVVVETMSLPQAADIPEIKLF-GRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSA 245
VA ++V S+ Q PE ++ GR CY + L+ YI +E+YA++
Sbjct: 13 VALTALLMVLLTSVVQGRATPENYVYQGRQECYAFNGTQRFLERYIYNREEYARF-DSDV 71
Query: 246 GRYHTSVSV-KPXAQSWS 296
G + + +P A+ W+
Sbjct: 72 GEFRAVTELGRPAAEYWN 89
>AY804143-1|AAW78748.1| 258|Homo sapiens MHC class II antigen
protein.
Length = 258
Score = 31.1 bits (67), Expect = 4.4
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +3
Query: 69 VAEAGSVVVETMSLPQAADIPEIKLF-GRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSA 245
VA ++V S+ Q PE ++ GR CY + L+ YI +E+YA++
Sbjct: 13 VALTALLMVLLTSVVQGRATPENYVYQGRQECYAFNGTQRFLERYIYNREEYARF-DSDV 71
Query: 246 GRYHTSVSV-KPXAQSWS 296
G + + +P A+ W+
Sbjct: 72 GEFRAVTELGRPAAEYWN 89
>AY804133-1|AAW78738.1| 258|Homo sapiens MHC class II antigen
protein.
Length = 258
Score = 31.1 bits (67), Expect = 4.4
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +3
Query: 69 VAEAGSVVVETMSLPQAADIPEIKLF-GRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSA 245
VA ++V S+ Q PE ++ GR CY + L+ YI +E+YA++
Sbjct: 13 VALTALLMVLLTSVVQGRATPENYVYQGRQECYAFNGTQRFLERYIYNREEYARF-DSDV 71
Query: 246 GRYHTSVSV-KPXAQSWS 296
G + + +P A+ W+
Sbjct: 72 GEFRAVTELGRPAAEYWN 89
>AY804141-1|AAW78746.1| 258|Homo sapiens MHC class II antigen
protein.
Length = 258
Score = 30.3 bits (65), Expect = 7.7
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = +3
Query: 69 VAEAGSVVVETMSLPQAADIPEIKLF-GRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSA 245
VA ++V S+ Q PE ++ GR CY + L+ YI +++YA++
Sbjct: 13 VALTALLMVLLTSVVQGRATPENYVYQGRQECYAFNGTQRFLERYIYNRQEYARF-DSDV 71
Query: 246 GRYHTSVSV-KPXAQSWSXLQTL 311
G + + +P A+ W+ + L
Sbjct: 72 GEFRAVTELGRPAAEYWNSQKDL 94
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,920,394
Number of Sequences: 237096
Number of extensions: 1966549
Number of successful extensions: 3654
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3635
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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