Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0447
         (748 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    25   0.57 
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    22   7.0  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    22   7.0  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   9.3  

>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 25.4 bits (53), Expect = 0.57
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
 Frame = -2

Query: 351 AISFLPLFRPCIIREFVXXSTI-GXWALRKRLCDTCQLNEVNILRTSL*RKCS 196
           +++   LF  C++  F   + + G W    R CDT    +V     S+   C+
Sbjct: 66  SLAIADLFVGCLVMTFAGVNDLLGYWVFGPRFCDTWIAFDVMCSTASILNLCA 118


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 642 LTPTPSKKKGRAGAC 686
           LTP P+  + +AGAC
Sbjct: 109 LTPYPNWAQNKAGAC 123


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 189 ETYQRLAHRSNSICRKA*FQECRRLVVKTWFP 94
           + Y+RL H  N I ++  F    RL   T+ P
Sbjct: 240 QVYRRLVHAVNEIEKRLLFSHNDRLGFLTFCP 271


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +2

Query: 359 IVKHAFEIIHLLTGENPLQVLVTAII 436
           +++HAFEI  +L    P+ +++   I
Sbjct: 217 LIEHAFEISTMLFFVLPMTIIIVLYI 242


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,233
Number of Sequences: 438
Number of extensions: 3841
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)