Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0447
(748 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g37270.1 68415.m04572 40S ribosomal protein S5 (RPS5A) identi... 166 1e-41
At3g11940.2 68416.m01470 40S ribosomal protein S5 (RPS5B) simila... 165 2e-41
At3g11940.1 68416.m01469 40S ribosomal protein S5 (RPS5B) simila... 165 2e-41
At2g45590.1 68415.m05669 protein kinase family protein contains ... 31 1.1
At4g39955.1 68417.m05659 hydrolase, alpha/beta fold family prote... 27 10.0
At1g57600.1 68414.m06536 membrane bound O-acyl transferase (MBOA... 27 10.0
>At2g37270.1 68415.m04572 40S ribosomal protein S5 (RPS5A) identical
to GP:3043428
Length = 207
Score = 166 bits (404), Expect = 1e-41
Identities = 87/138 (63%), Positives = 99/138 (71%)
Frame = +2
Query: 254 SHKRFRKAQXPIVEXXTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 433
S KRFRKAQ PIVE TNSLMMHGRNNGKKLMAVRIVKHA EIIHLL+ NP+QV++ AI
Sbjct: 60 SVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAI 119
Query: 434 INSGPREDSTRIGRAGTVRRQAVDVHPCXESTKQSGLLCTGAREGCIQKY*XNRRVCCR* 613
+NSGPRED+TRIG AG VRRQAVD+ P + LL TGARE + C
Sbjct: 120 VNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLLTTGAREAAFRNI-KTIAECLAD 178
Query: 614 INLMQLRGSSNSYAIKKE 667
+ +GSSNSYAIKK+
Sbjct: 179 ELINAAKGSSNSYAIKKK 196
Score = 66.1 bits (154), Expect = 2e-11
Identities = 63/177 (35%), Positives = 89/177 (50%), Gaps = 14/177 (7%)
Frame = +3
Query: 132 EIKLFGRWSCYDVQVSDMSLQDYISVK-EKYAKYLPHSAGRYHTSVSVKPXAQSWSXLQT 308
E+KLF RWS DV V+D+SL DYI V+ K+A ++PH+AGRY SVK ++
Sbjct: 18 EVKLFNRWSFDDVSVTDISLVDYIGVQPSKHATFVPHTAGRY----SVKRFRKAQ----- 68
Query: 309 L**CTVGTMAKN*WPYVLSNMRLKLFTC*LEKTLCKYS*LPLSTLDPVKIXLGSVV---- 476
C + N N KL + K + L LS L+P+++ + ++V
Sbjct: 69 ---CPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHL-LSDLNPIQVIIDAIVNSGP 124
Query: 477 -----RV--QFVVKPLMFTLAPSQPSNLG-FCAQVHVR-AAFRNIXTIAECVADELI 620
R+ VV+ ++P + N F R AAFRNI TIAEC+ADELI
Sbjct: 125 REDATRIGSAGVVRRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADELI 181
>At3g11940.2 68416.m01470 40S ribosomal protein S5 (RPS5B) similar
to 40S ribosomal protein S5 GB:AAC98068 GI:4056502 from
[Arabidopsis thaliana]
Length = 207
Score = 165 bits (402), Expect = 2e-41
Identities = 86/138 (62%), Positives = 99/138 (71%)
Frame = +2
Query: 254 SHKRFRKAQXPIVEXXTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 433
S KRFRKAQ PIVE TNSLMMHGRNNGKKLMAVRIVKHA EIIHLL+ NP+QV++ AI
Sbjct: 60 SVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAI 119
Query: 434 INSGPREDSTRIGRAGTVRRQAVDVHPCXESTKQSGLLCTGAREGCIQKY*XNRRVCCR* 613
+NSGPRED+TRIG AG VRRQAVD+ P + L+ TGARE + C
Sbjct: 120 VNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLITTGAREAAFRNI-KTIAECLAD 178
Query: 614 INLMQLRGSSNSYAIKKE 667
+ +GSSNSYAIKK+
Sbjct: 179 ELINAAKGSSNSYAIKKK 196
Score = 64.5 bits (150), Expect = 7e-11
Identities = 64/183 (34%), Positives = 91/183 (49%), Gaps = 14/183 (7%)
Frame = +3
Query: 114 QAADIPEIKLFGRWSCYDVQVSDMSLQDYISVK-EKYAKYLPHSAGRYHTSVSVKPXAQS 290
Q A E+KLF RW+ DV V+D+SL DYI V+ K+A ++PH+AGRY SVK ++
Sbjct: 12 QQALTNEVKLFNRWTYDDVTVTDISLVDYIGVQAAKHATFVPHTAGRY----SVKRFRKA 67
Query: 291 WSXLQTL**CTVGTMAKN*WPYVLSNMRLKLFTC*LEKTLCKYS*LPLSTLDPVKIXLGS 470
C + N N KL + K + L LS L+P+++ + +
Sbjct: 68 Q--------CPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHL-LSDLNPIQVIIDA 118
Query: 471 VV---------RV--QFVVKPLMFTLAPSQPSNLG-FCAQVHVR-AAFRNIXTIAECVAD 611
+V R+ VV+ ++P + N F R AAFRNI TIAEC+AD
Sbjct: 119 IVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLITTGAREAAFRNIKTIAECLAD 178
Query: 612 ELI 620
ELI
Sbjct: 179 ELI 181
>At3g11940.1 68416.m01469 40S ribosomal protein S5 (RPS5B) similar
to 40S ribosomal protein S5 GB:AAC98068 GI:4056502 from
[Arabidopsis thaliana]
Length = 207
Score = 165 bits (402), Expect = 2e-41
Identities = 86/138 (62%), Positives = 99/138 (71%)
Frame = +2
Query: 254 SHKRFRKAQXPIVEXXTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 433
S KRFRKAQ PIVE TNSLMMHGRNNGKKLMAVRIVKHA EIIHLL+ NP+QV++ AI
Sbjct: 60 SVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAI 119
Query: 434 INSGPREDSTRIGRAGTVRRQAVDVHPCXESTKQSGLLCTGAREGCIQKY*XNRRVCCR* 613
+NSGPRED+TRIG AG VRRQAVD+ P + L+ TGARE + C
Sbjct: 120 VNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLITTGAREAAFRNI-KTIAECLAD 178
Query: 614 INLMQLRGSSNSYAIKKE 667
+ +GSSNSYAIKK+
Sbjct: 179 ELINAAKGSSNSYAIKKK 196
Score = 64.5 bits (150), Expect = 7e-11
Identities = 64/183 (34%), Positives = 91/183 (49%), Gaps = 14/183 (7%)
Frame = +3
Query: 114 QAADIPEIKLFGRWSCYDVQVSDMSLQDYISVK-EKYAKYLPHSAGRYHTSVSVKPXAQS 290
Q A E+KLF RW+ DV V+D+SL DYI V+ K+A ++PH+AGRY SVK ++
Sbjct: 12 QQALTNEVKLFNRWTYDDVTVTDISLVDYIGVQAAKHATFVPHTAGRY----SVKRFRKA 67
Query: 291 WSXLQTL**CTVGTMAKN*WPYVLSNMRLKLFTC*LEKTLCKYS*LPLSTLDPVKIXLGS 470
C + N N KL + K + L LS L+P+++ + +
Sbjct: 68 Q--------CPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHL-LSDLNPIQVIIDA 118
Query: 471 VV---------RV--QFVVKPLMFTLAPSQPSNLG-FCAQVHVR-AAFRNIXTIAECVAD 611
+V R+ VV+ ++P + N F R AAFRNI TIAEC+AD
Sbjct: 119 IVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLITTGAREAAFRNIKTIAECLAD 178
Query: 612 ELI 620
ELI
Sbjct: 179 ELI 181
>At2g45590.1 68415.m05669 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 683
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = +1
Query: 160 ATMCKSLICLCRTTFPLKRSTQNIYLIQLAGITQ----AFP*SPXPNRGAXYKLSNDAR 324
A +C ++ LC P+KR T + L+G+++ F SP P G +K AR
Sbjct: 625 AVLCITIALLCLQRSPVKRPTMKEIVEMLSGVSEPPHLPFEFSPSPPMGFPFKSRKKAR 683
>At4g39955.1 68417.m05659 hydrolase, alpha/beta fold family protein
low similarity to SP|P24640|LIP3_MORSP Lipase 3
precursor (EC 3.1.1.3) (Triacylglycerol lipase)
{Moraxella sp}; contains Pfam profile PF00561:
hydrolase, alpha/beta fold family
Length = 328
Score = 27.5 bits (58), Expect = 10.0
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +1
Query: 109 YHKPPTFLKSSFSADGVATMCKSLI 183
++KPP ++ S F+ D + MCK +
Sbjct: 191 FYKPPIWIPSCFAMDYIHVMCKDYL 215
>At1g57600.1 68414.m06536 membrane bound O-acyl transferase (MBOAT)
family protein low similarity to skinny hedgehog
[Drosophila melanogaster] GI:15420842; contains Pfam
profile PF03062: MBOAT family
Length = 533
Score = 27.5 bits (58), Expect = 10.0
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 85 AWLWKPCLYHKPPTFLKSSFSA 150
+W W CL+ P LKS+ SA
Sbjct: 426 SWAWLTCLFFMPEMLLKSASSA 447
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,134,574
Number of Sequences: 28952
Number of extensions: 298360
Number of successful extensions: 584
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 575
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1653386488
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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