Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0442
(647 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X98507-1|CAA67131.1| 1028|Homo sapiens myosin I beta protein. 32 1.5
BC068013-1|AAH68013.1| 1028|Homo sapiens myosin IC protein. 32 1.5
BC044891-1|AAH44891.2| 1028|Homo sapiens MYO1C protein protein. 32 1.5
AB210015-1|BAE06097.1| 1097|Homo sapiens MYO1C variant protein p... 32 1.5
BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein. 31 4.7
AL031597-2|CAI23555.1| 3014|Homo sapiens cadherin, EGF LAG seven... 30 6.2
AL031588-3|CAI19319.1| 3014|Homo sapiens cadherin, EGF LAG seven... 30 6.2
AL021392-2|CAI20967.1| 3014|Homo sapiens cadherin, EGF LAG seven... 30 6.2
AF231024-1|AAF61930.1| 3014|Homo sapiens protocadherin Flamingo ... 30 6.2
BX640673-1|CAE45805.1| 648|Homo sapiens hypothetical protein pr... 30 8.2
BC126307-1|AAI26308.1| 986|Homo sapiens MYOCD protein protein. 30 8.2
AY764180-1|AAV33439.1| 986|Homo sapiens myocardin protein. 30 8.2
AK097821-1|BAC05177.1| 684|Homo sapiens protein ( Homo sapiens ... 30 8.2
AF532596-1|AAN33040.1| 938|Homo sapiens myocardin transcription... 30 8.2
>X98507-1|CAA67131.1| 1028|Homo sapiens myosin I beta protein.
Length = 1028
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 97 VLPALSAEDVSYQACVDKYSRKGYQP 174
VL AL +E + Y V KY RKGY+P
Sbjct: 875 VLQALGSEPIQYAVPVVKYDRKGYKP 900
>BC068013-1|AAH68013.1| 1028|Homo sapiens myosin IC protein.
Length = 1028
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 97 VLPALSAEDVSYQACVDKYSRKGYQP 174
VL AL +E + Y V KY RKGY+P
Sbjct: 875 VLQALGSEPIQYAVPVVKYDRKGYKP 900
>BC044891-1|AAH44891.2| 1028|Homo sapiens MYO1C protein protein.
Length = 1028
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 97 VLPALSAEDVSYQACVDKYSRKGYQP 174
VL AL +E + Y V KY RKGY+P
Sbjct: 875 VLQALGSEPIQYAVPVVKYDRKGYKP 900
>AB210015-1|BAE06097.1| 1097|Homo sapiens MYO1C variant protein
protein.
Length = 1097
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 97 VLPALSAEDVSYQACVDKYSRKGYQP 174
VL AL +E + Y V KY RKGY+P
Sbjct: 944 VLQALGSEPIQYAVPVVKYDRKGYKP 969
>BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein.
Length = 1690
Score = 30.7 bits (66), Expect = 4.7
Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +3
Query: 300 EYIEDENV-EFPTCCARLRCVVEVNGERIVQTRGQPGELFPDKPWKGQQNEPNPAVVGMS 476
EY E E+V E PT E+NG +GQ GE +P + P PA G +
Sbjct: 277 EYKEAESVTEGPTVTEETIAQTEINGHGAYGEKGQKGEPAVVEPGMLVEGPPGPA--GPA 334
Query: 477 GIQQTP 494
GI P
Sbjct: 335 GIMGPP 340
>AL031597-2|CAI23555.1| 3014|Homo sapiens cadherin, EGF LAG seven-pass
G-type receptor 1 (flamingo homolog, Drosophila) protein.
Length = 3014
Score = 30.3 bits (65), Expect = 6.2
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 374 RENSANQRAAWRTVPR*TMEGPTKRAKSCCCRXERHPADTGRWA 505
+E + A RT P+ T GP ++ R RHP D G++A
Sbjct: 2294 KEGPLLRPAGRRTTPQTTRPGPGTEREAPISRRRRHPDDAGQFA 2337
>AL031588-3|CAI19319.1| 3014|Homo sapiens cadherin, EGF LAG seven-pass
G-type receptor 1 (flamingo homolog, Drosophila) protein.
Length = 3014
Score = 30.3 bits (65), Expect = 6.2
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 374 RENSANQRAAWRTVPR*TMEGPTKRAKSCCCRXERHPADTGRWA 505
+E + A RT P+ T GP ++ R RHP D G++A
Sbjct: 2294 KEGPLLRPAGRRTTPQTTRPGPGTEREAPISRRRRHPDDAGQFA 2337
>AL021392-2|CAI20967.1| 3014|Homo sapiens cadherin, EGF LAG seven-pass
G-type receptor 1 (flamingo homolog, Drosophila) protein.
Length = 3014
Score = 30.3 bits (65), Expect = 6.2
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 374 RENSANQRAAWRTVPR*TMEGPTKRAKSCCCRXERHPADTGRWA 505
+E + A RT P+ T GP ++ R RHP D G++A
Sbjct: 2294 KEGPLLRPAGRRTTPQTTRPGPGTEREAPISRRRRHPDDAGQFA 2337
>AF231024-1|AAF61930.1| 3014|Homo sapiens protocadherin Flamingo 2
protein.
Length = 3014
Score = 30.3 bits (65), Expect = 6.2
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 374 RENSANQRAAWRTVPR*TMEGPTKRAKSCCCRXERHPADTGRWA 505
+E + A RT P+ T GP ++ R RHP D G++A
Sbjct: 2294 KEGPLLRPAGRRTTPQTTRPGPGTEREAPISRRRRHPDDAGQFA 2337
>BX640673-1|CAE45805.1| 648|Homo sapiens hypothetical protein
protein.
Length = 648
Score = 29.9 bits (64), Expect = 8.2
Identities = 18/68 (26%), Positives = 26/68 (38%)
Frame = -2
Query: 481 MPLXPTTAGFGSFCWPFHGLSGNSSPGCPLVCTILSPFTSTTQRNRAQHVGNSTFSSSMY 302
+P+ T PF SGN P + T+ P T T N S S+ Y
Sbjct: 93 LPVSGTKTALMDRLRPFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNGFY 152
Query: 301 SWHSSAFS 278
+ S++ S
Sbjct: 153 HFGSTSSS 160
>BC126307-1|AAI26308.1| 986|Homo sapiens MYOCD protein protein.
Length = 986
Score = 29.9 bits (64), Expect = 8.2
Identities = 18/68 (26%), Positives = 26/68 (38%)
Frame = -2
Query: 481 MPLXPTTAGFGSFCWPFHGLSGNSSPGCPLVCTILSPFTSTTQRNRAQHVGNSTFSSSMY 302
+P+ T PF SGN P + T+ P T T N S S+ Y
Sbjct: 388 LPVSGTKTALMDRLRPFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNGFY 447
Query: 301 SWHSSAFS 278
+ S++ S
Sbjct: 448 HFGSTSSS 455
>AY764180-1|AAV33439.1| 986|Homo sapiens myocardin protein.
Length = 986
Score = 29.9 bits (64), Expect = 8.2
Identities = 18/68 (26%), Positives = 26/68 (38%)
Frame = -2
Query: 481 MPLXPTTAGFGSFCWPFHGLSGNSSPGCPLVCTILSPFTSTTQRNRAQHVGNSTFSSSMY 302
+P+ T PF SGN P + T+ P T T N S S+ Y
Sbjct: 388 LPVSGTKTALMDRLRPFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNGFY 447
Query: 301 SWHSSAFS 278
+ S++ S
Sbjct: 448 HFGSTSSS 455
>AK097821-1|BAC05177.1| 684|Homo sapiens protein ( Homo sapiens
cDNA FLJ40502 fis, clone TESTI2045199. ).
Length = 684
Score = 29.9 bits (64), Expect = 8.2
Identities = 18/68 (26%), Positives = 26/68 (38%)
Frame = -2
Query: 481 MPLXPTTAGFGSFCWPFHGLSGNSSPGCPLVCTILSPFTSTTQRNRAQHVGNSTFSSSMY 302
+P+ T PF SGN P + T+ P T T N S S+ Y
Sbjct: 292 LPVSGTKTALMDRLRPFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNGFY 351
Query: 301 SWHSSAFS 278
+ S++ S
Sbjct: 352 HFGSTSSS 359
>AF532596-1|AAN33040.1| 938|Homo sapiens myocardin transcription
factor protein.
Length = 938
Score = 29.9 bits (64), Expect = 8.2
Identities = 18/68 (26%), Positives = 26/68 (38%)
Frame = -2
Query: 481 MPLXPTTAGFGSFCWPFHGLSGNSSPGCPLVCTILSPFTSTTQRNRAQHVGNSTFSSSMY 302
+P+ T PF SGN P + T+ P T T N S S+ Y
Sbjct: 388 LPVSGTKTALMDRLRPFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNGFY 447
Query: 301 SWHSSAFS 278
+ S++ S
Sbjct: 448 HFGSTSSS 455
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,601,767
Number of Sequences: 237096
Number of extensions: 2623986
Number of successful extensions: 10813
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 10301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10813
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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