Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0441
         (598 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g22820.1 68418.m02668 expressed protein                             29   1.8  
At2g21380.1 68415.m02544 kinesin motor protein-related                 29   3.1  
At2g17540.2 68415.m02030 expressed protein                             28   5.4  
At2g17540.1 68415.m02029 expressed protein                             28   5.4  
At5g51200.1 68418.m06349 expressed protein                             27   7.2  
At2g25730.1 68415.m03084 expressed protein                             27   7.2  
At2g41730.1 68415.m05158 expressed protein                             27   9.5  
At2g15680.1 68415.m01795 calmodulin-related protein, putative si...    27   9.5  
At1g21970.1 68414.m02749 CCAAT-box binding transcription factor ...    27   9.5  

>At5g22820.1 68418.m02668 expressed protein
          Length = 490

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -1

Query: 190 LSNLDIATWAAAAVNGDTLKHLCWISEST 104
           LS     +WA    + D L+H+ WI+E+T
Sbjct: 232 LSGAGCTSWAHCLESDDILRHILWIAENT 260


>At2g21380.1 68415.m02544 kinesin motor protein-related
          Length = 1058

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -1

Query: 178  DIATWAAAAVNGDTLKHLCWIS-ESTTLVLLPXPCKTLIQC 59
            ++ + AAAA N D   H+C +  ES T  +L  PC+    C
Sbjct: 993  EMKSQAAAAANADANSHICKVCFESPTATIL-LPCRHFCLC 1032


>At2g17540.2 68415.m02030 expressed protein 
          Length = 275

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 404 SSGLPRXAVPSTIHCDHLIEAQVGGEKDLARAKDLT 511
           S+G    AV  T H DHL+  Q    ++LA+A   T
Sbjct: 49  SNGSSASAVVHTHHLDHLLNDQTRSPEELAQASKAT 84


>At2g17540.1 68415.m02029 expressed protein 
          Length = 275

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 404 SSGLPRXAVPSTIHCDHLIEAQVGGEKDLARAKDLT 511
           S+G    AV  T H DHL+  Q    ++LA+A   T
Sbjct: 49  SNGSSASAVVHTHHLDHLLNDQTRSPEELAQASKAT 84


>At5g51200.1 68418.m06349 expressed protein
          Length = 1808

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = +2

Query: 353 RVAMQDATAQMAMLQFISSGLP--RXAVPSTIHCDHLIEAQVGGEKDL 490
           +V   D ++Q+  +QF  + +   R   PSTI   +LI A + GEKD+
Sbjct: 596 QVGKSDQSSQVYDMQFELNEVEARREQYPSTISFLNLINALIAGEKDV 643


>At2g25730.1 68415.m03084 expressed protein 
          Length = 2464

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +3

Query: 327  QVISACXPTVWPCKTPLHKWQCYNLSLPAFP 419
            +VISAC P V+P ++  H W C  + +P  P
Sbjct: 1081 EVISACVPPVYPPRSG-HGWACIPV-IPTTP 1109


>At2g41730.1 68415.m05158 expressed protein
          Length = 119

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -1

Query: 463 FDQVITMNGGRYSXTGKAGRDKL*HCHLCSGVLHGH 356
           F +V +      + TG++ R K  HCH+   +  GH
Sbjct: 39  FTKVPSKTTNHSNTTGESERSKYSHCHVSPAIKSGH 74


>At2g15680.1 68415.m01795 calmodulin-related protein, putative
           similar to calmodulin-related protein 2, touch-induced
           SP:P25070 from [Arabidopsis thaliana]
          Length = 187

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 11/21 (52%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = -3

Query: 467 GLRSSD-HNEWWTVQLXGEGR 408
           G+RSSD  N +WT  L G+G+
Sbjct: 116 GIRSSDIRNSFWTFDLNGDGK 136


>At1g21970.1 68414.m02749 CCAAT-box binding transcription factor
           (LEC1) similar to CAAT-box DNA binding protein subunit B
           (NF-YB) (SP:P25209) (GI:22380) [Zea mays]; identical to
           GB:AAC39488 GI:3282674 from [Arabidopsis thaliana] (Cell
           93 (7), 1195-1205 (1998)); identified in Plant Cell 2003
           Jan;15(1):5-18; contains Pfam PF00808 : Histone-like
           transcription factor (CBF/NF-Y) and archaeal histone
          Length = 238

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 460 DQVITMNGGRYSXTGKAGRDK 398
           DQ + M GGRY   G +G+D+
Sbjct: 194 DQSMVMGGGRYYQNGSSGQDE 214


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,431,146
Number of Sequences: 28952
Number of extensions: 248230
Number of successful extensions: 513
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 513
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)