Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0438
         (499 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ...    28   3.3  
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ...    28   3.3  
Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical pr...    27   7.6  
U23518-2|AAC70884.4|  496|Caenorhabditis elegans Hypothetical pr...    27   7.6  
AC084152-4|AAR85899.1|  753|Caenorhabditis elegans Hypothetical ...    27   7.6  
AC084152-3|AAK39314.2|  772|Caenorhabditis elegans Hypothetical ...    27   7.6  

>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
            protein R148.3a protein.
          Length = 1115

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -2

Query: 255  SXASPFSAGESSGASSVPFSLPLLSA 178
            S   P+S+G S+G  S P  +PLLSA
Sbjct: 1071 SANGPYSSGGSNGGRSPPPEMPLLSA 1096


>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
            protein R148.3b protein.
          Length = 1130

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -2

Query: 255  SXASPFSAGESSGASSVPFSLPLLSA 178
            S   P+S+G S+G  S P  +PLLSA
Sbjct: 1083 SANGPYSSGGSNGGRSPPPEMPLLSA 1108


>Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical protein
            F20C5.2b protein.
          Length = 1130

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -2

Query: 270  RCIVASXASPFSAGESSGASSVPFSLPLLSAASTFLAGDF 151
            RC++A  +SPF    S+ A+S      LL+++S  +A  +
Sbjct: 943  RCLLALHSSPFRLSTSASATSSSQHQRLLTSSSIHVASSY 982


>U23518-2|AAC70884.4|  496|Caenorhabditis elegans Hypothetical
           protein F21D12.3 protein.
          Length = 496

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -1

Query: 238 FSRRIFWGFIGTILFAITFCSFNFL 164
           F++ IF GF+G ++  +  C F F+
Sbjct: 266 FTKSIFAGFLGVVILYLPLCIFAFV 290


>AC084152-4|AAR85899.1|  753|Caenorhabditis elegans Hypothetical
           protein Y102A11A.2b protein.
          Length = 753

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -2

Query: 264 IVASXASPFS-AGESSGASSVPFSLPLLSAASTFLAGD 154
           +  S ASP S +G  +  + V  +LP+ S  STFL G+
Sbjct: 317 LATSTASPLSFSGHRAPPAEVRETLPMSSQVSTFLRGN 354


>AC084152-3|AAK39314.2|  772|Caenorhabditis elegans Hypothetical
           protein Y102A11A.2a protein.
          Length = 772

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -2

Query: 264 IVASXASPFS-AGESSGASSVPFSLPLLSAASTFLAGD 154
           +  S ASP S +G  +  + V  +LP+ S  STFL G+
Sbjct: 317 LATSTASPLSFSGHRAPPAEVRETLPMSSQVSTFLRGN 354


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,187,722
Number of Sequences: 27780
Number of extensions: 116899
Number of successful extensions: 327
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 327
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)