Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0433
         (628 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.6  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   4.8  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   4.8  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   4.8  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   8.4  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +1

Query: 106  NQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEA 228
            N+I  + W +  D  G     AYHGD  +  E I    ++A
Sbjct: 911  NRIRNQRWIVNRDTSGATGPFAYHGDQWVGFEDIKSVRDKA 951


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 374 LGPVVAGAXCPKTKLSGRKICPK 306
           + PVV G    + + +GRK+ P+
Sbjct: 326 MNPVVYGVFNIRARRTGRKVSPR 348


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 374 LGPVVAGAXCPKTKLSGRKICPK 306
           + PVV G    + + +GRK+ P+
Sbjct: 326 MNPVVYGVFNIRARRTGRKVSPR 348


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = -2

Query: 516 EXVPYGNRCRRRASVSVGIPGGNHTIPLPX*RRLKXNRRAQHPPCSVPWP 367
           +  P+G       S+S G+ GG   +P+P            HP  SVP+P
Sbjct: 69  QTAPHGPPYAPHPSLSSGLGGGLSGMPMP-----ALGFGLGHPLESVPFP 113


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 242 YVPRASSSTWSPA 280
           Y   A+SS WSPA
Sbjct: 210 YTNSANSSIWSPA 222


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,808
Number of Sequences: 336
Number of extensions: 2792
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)