Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0433
(628 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 207 4e-54
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 205 2e-53
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 204 4e-53
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 204 4e-53
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 204 5e-53
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 204 5e-53
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 202 2e-52
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 201 3e-52
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 200 5e-52
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 86 2e-17
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 83 1e-16
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 83 1e-16
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 82 3e-16
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 82 3e-16
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 80 1e-15
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 80 1e-15
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 75 5e-14
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 74 9e-14
At4g37190.1 68417.m05265 expressed protein 31 0.83
At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein ... 29 2.5
At2g38800.1 68415.m04764 calmodulin-binding protein-related cont... 28 4.4
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 28 5.8
At4g26400.2 68417.m03800 zinc finger (C3HC4-type RING finger) fa... 27 7.7
At4g26400.1 68417.m03799 zinc finger (C3HC4-type RING finger) fa... 27 7.7
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 27 7.7
At1g21850.1 68414.m02735 multi-copper oxidase type I family prot... 27 7.7
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 207 bits (506), Expect = 4e-54
Identities = 107/186 (57%), Positives = 125/186 (67%), Gaps = 3/186 (1%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGQV 243
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 244 RAPRILVDLEPGTMDSVRSGPFGQIFRPDNFVFGXXAPATTGPRDTTRRVLSSSIXF*TS 423
+L+DLEPGTMDS+RSGP+GQIFRPDNFVFG + + I
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEG-AELIDAVLD 119
Query: 424 LXRK--RNRVIASRDSN*HTRSAAAPVTVWDXLISKIREXYPXRIMNTYSVVPSPKVSDT 597
+ RK N H+ + LISKIRE YP R+M T+SV PSPKVSDT
Sbjct: 120 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 179
Query: 598 VVEPYN 615
VVEPYN
Sbjct: 180 VVEPYN 185
Score = 103 bits (246), Expect = 1e-22
Identities = 44/53 (83%), Positives = 48/53 (90%)
Frame = +3
Query: 351 GAGNNWAKGHYTEGAELVDSXLDVVXKEAESCDCLQGFQLTHSLGGGTGYRMG 509
GAGNNWAKGHYTEGAEL+D+ LDVV KEAE+CDCLQGFQ+ HSLGGGTG MG
Sbjct: 97 GAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMG 149
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 205 bits (500), Expect = 2e-53
Identities = 109/187 (58%), Positives = 124/187 (66%), Gaps = 4/187 (2%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 246
MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGG+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 247 APRILVDLEPGTMDSVRSGPFGQIFRPDNFVFGXXAPATTGPRD--TTRRVLSSSIXF*T 420
+L+DLEPGTMDS+RSGPFGQIFRPDNFVFG + T L S+
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV---L 117
Query: 421 SLXRK--RNRVIASRDSN*HTRSAAAPVTVWDXLISKIREXYPXRIMNTYSVVPSPKVSD 594
+ RK N H+ + LISKIRE YP R+M T+SV PSPKVSD
Sbjct: 118 DVVRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSD 177
Query: 595 TVVEPYN 615
TVVEPYN
Sbjct: 178 TVVEPYN 184
Score = 100 bits (239), Expect = 9e-22
Identities = 44/53 (83%), Positives = 47/53 (88%)
Frame = +3
Query: 351 GAGNNWAKGHYTEGAELVDSXLDVVXKEAESCDCLQGFQLTHSLGGGTGYRMG 509
GAGNNWAKGHYTEGAEL+DS LDVV KEAE+ DCLQGFQ+ HSLGGGTG MG
Sbjct: 96 GAGNNWAKGHYTEGAELIDSVLDVVRKEAENSDCLQGFQVCHSLGGGTGSGMG 148
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 204 bits (498), Expect = 4e-53
Identities = 106/185 (57%), Positives = 123/185 (66%), Gaps = 2/185 (1%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 246
MREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 247 APRILVDLEPGTMDSVRSGPFGQIFRPDNFVFGXXAPATTGPRDTTRRVLSSSIXF*TSL 426
IL+DLEPGTMDSVR+GP+GQIFRPDNFVFG + + I +
Sbjct: 61 PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEG-AELIDAVLDV 119
Query: 427 XRK--RNRVIASRDSN*HTRSAAAPVTVWDXLISKIREXYPXRIMNTYSVVPSPKVSDTV 600
RK N H+ + LISKIRE YP R+M T+SV PSPKVSDTV
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 179
Query: 601 VEPYN 615
VEPYN
Sbjct: 180 VEPYN 184
Score = 103 bits (246), Expect = 1e-22
Identities = 44/53 (83%), Positives = 48/53 (90%)
Frame = +3
Query: 351 GAGNNWAKGHYTEGAELVDSXLDVVXKEAESCDCLQGFQLTHSLGGGTGYRMG 509
GAGNNWAKGHYTEGAEL+D+ LDVV KEAE+CDCLQGFQ+ HSLGGGTG MG
Sbjct: 96 GAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMG 148
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 204 bits (498), Expect = 4e-53
Identities = 108/186 (58%), Positives = 123/186 (66%), Gaps = 3/186 (1%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGQV 243
MREI+HIQ GQCGNQIG+KFWE+I DEHGID TG Y GD+ DLQLERINVYYNEASGG+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 244 RAPRILVDLEPGTMDSVRSGPFGQIFRPDNFVFGXXAPATTGPRDTTRRVLSSSIXF*TS 423
+L+DLEPGTMDS+RSGPFGQIFRPDNFVFG + + I
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEG-AELIDAVLD 119
Query: 424 LXRK--RNRVIASRDSN*HTRSAAAPVTVWDXLISKIREXYPXRIMNTYSVVPSPKVSDT 597
+ RK N H+ + LISKIRE YP R+M T+SV PSPKVSDT
Sbjct: 120 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 179
Query: 598 VVEPYN 615
VVEPYN
Sbjct: 180 VVEPYN 185
Score = 103 bits (246), Expect = 1e-22
Identities = 44/53 (83%), Positives = 48/53 (90%)
Frame = +3
Query: 351 GAGNNWAKGHYTEGAELVDSXLDVVXKEAESCDCLQGFQLTHSLGGGTGYRMG 509
GAGNNWAKGHYTEGAEL+D+ LDVV KEAE+CDCLQGFQ+ HSLGGGTG MG
Sbjct: 97 GAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMG 149
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 204 bits (497), Expect = 5e-53
Identities = 108/187 (57%), Positives = 123/187 (65%), Gaps = 4/187 (2%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 246
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 247 APRILVDLEPGTMDSVRSGPFGQIFRPDNFVFGXXAPATTGPRD--TTRRVLSSSIXF*T 420
+L+DLEPGTMDS+RSGP+GQ FRPDNFVFG + T L S+
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV---L 117
Query: 421 SLXRK--RNRVIASRDSN*HTRSAAAPVTVWDXLISKIREXYPXRIMNTYSVVPSPKVSD 594
+ RK N H+ + LISKIRE YP R+M T+SV PSPKVSD
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 177
Query: 595 TVVEPYN 615
TVVEPYN
Sbjct: 178 TVVEPYN 184
Score = 104 bits (249), Expect = 6e-23
Identities = 45/53 (84%), Positives = 48/53 (90%)
Frame = +3
Query: 351 GAGNNWAKGHYTEGAELVDSXLDVVXKEAESCDCLQGFQLTHSLGGGTGYRMG 509
GAGNNWAKGHYTEGAEL+DS LDVV KEAE+CDCLQGFQ+ HSLGGGTG MG
Sbjct: 96 GAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMG 148
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 204 bits (497), Expect = 5e-53
Identities = 108/187 (57%), Positives = 123/187 (65%), Gaps = 4/187 (2%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 246
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 247 APRILVDLEPGTMDSVRSGPFGQIFRPDNFVFGXXAPATTGPRD--TTRRVLSSSIXF*T 420
+L+DLEPGTMDS+RSGP+GQ FRPDNFVFG + T L S+
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV---L 117
Query: 421 SLXRK--RNRVIASRDSN*HTRSAAAPVTVWDXLISKIREXYPXRIMNTYSVVPSPKVSD 594
+ RK N H+ + LISKIRE YP R+M T+SV PSPKVSD
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 177
Query: 595 TVVEPYN 615
TVVEPYN
Sbjct: 178 TVVEPYN 184
Score = 104 bits (249), Expect = 6e-23
Identities = 45/53 (84%), Positives = 48/53 (90%)
Frame = +3
Query: 351 GAGNNWAKGHYTEGAELVDSXLDVVXKEAESCDCLQGFQLTHSLGGGTGYRMG 509
GAGNNWAKGHYTEGAEL+DS LDVV KEAE+CDCLQGFQ+ HSLGGGTG MG
Sbjct: 96 GAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMG 148
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 202 bits (492), Expect = 2e-52
Identities = 108/187 (57%), Positives = 123/187 (65%), Gaps = 4/187 (2%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 246
MREI+HIQ GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGG+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 247 APRILVDLEPGTMDSVRSGPFGQIFRPDNFVFGXXAPATTGPRD--TTRRVLSSSIXF*T 420
+L+DLEPGTMDS+RSGPFGQIFRPDNFVFG + T L S+
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV---L 117
Query: 421 SLXRK--RNRVIASRDSN*HTRSAAAPVTVWDXLISKIREXYPXRIMNTYSVVPSPKVSD 594
+ RK N H+ + LISKIRE YP R+M T+SV PSPKVSD
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSD 177
Query: 595 TVVEPYN 615
TVVEPYN
Sbjct: 178 TVVEPYN 184
Score = 104 bits (249), Expect = 6e-23
Identities = 45/53 (84%), Positives = 48/53 (90%)
Frame = +3
Query: 351 GAGNNWAKGHYTEGAELVDSXLDVVXKEAESCDCLQGFQLTHSLGGGTGYRMG 509
GAGNNWAKGHYTEGAEL+DS LDVV KEAE+CDCLQGFQ+ HSLGGGTG MG
Sbjct: 96 GAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMG 148
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 201 bits (491), Expect = 3e-52
Identities = 106/187 (56%), Positives = 123/187 (65%), Gaps = 4/187 (2%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 246
MREI+HIQ GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 247 APRILVDLEPGTMDSVRSGPFGQIFRPDNFVFGXXAPATTGPRD--TTRRVLSSSIXF*T 420
+L+DLEPGTMDSVRSGP+GQIFRPDNFVFG + T L S+
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV---L 117
Query: 421 SLXRK--RNRVIASRDSN*HTRSAAAPVTVWDXLISKIREXYPXRIMNTYSVVPSPKVSD 594
+ RK N H+ + LISKIRE YP R+M T+SV PSPKVSD
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 177
Query: 595 TVVEPYN 615
TVVEPYN
Sbjct: 178 TVVEPYN 184
Score = 104 bits (249), Expect = 6e-23
Identities = 45/53 (84%), Positives = 48/53 (90%)
Frame = +3
Query: 351 GAGNNWAKGHYTEGAELVDSXLDVVXKEAESCDCLQGFQLTHSLGGGTGYRMG 509
GAGNNWAKGHYTEGAEL+DS LDVV KEAE+CDCLQGFQ+ HSLGGGTG MG
Sbjct: 96 GAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMG 148
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 200 bits (489), Expect = 5e-52
Identities = 106/187 (56%), Positives = 124/187 (66%), Gaps = 4/187 (2%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 246
MREI+HIQ GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 247 APRILVDLEPGTMDSVRSGPFGQIFRPDNFVFGXXAPATTGPRD--TTRRVLSSSIXF*T 420
+L+DLEPGTMDSVRSGP+GQIFRPDNFVFG + T L S+
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV---L 117
Query: 421 SLXRK--RNRVIASRDSN*HTRSAAAPVTVWDXLISKIREXYPXRIMNTYSVVPSPKVSD 594
+ RK N H+ + LISKIRE YP R+M T+SV PSPKVSD
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSD 177
Query: 595 TVVEPYN 615
TVVEPYN
Sbjct: 178 TVVEPYN 184
Score = 104 bits (249), Expect = 6e-23
Identities = 45/53 (84%), Positives = 48/53 (90%)
Frame = +3
Query: 351 GAGNNWAKGHYTEGAELVDSXLDVVXKEAESCDCLQGFQLTHSLGGGTGYRMG 509
GAGNNWAKGHYTEGAEL+DS LDVV KEAE+CDCLQGFQ+ HSLGGGTG MG
Sbjct: 96 GAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMG 148
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 85.8 bits (203), Expect = 2e-17
Identities = 54/188 (28%), Positives = 85/188 (45%), Gaps = 5/188 (2%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 240
MREI+ I GQ G Q+G WE+ EHGI P G DS + + N +++E S GQ
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 241 VRAPRILVDLEPGTMDSVRSGPFGQIFRPDNFVFGXXAPATT---GPRDTTRRVLSSSIX 411
+ +DLEP +D VR+G + Q+F P+ + G A G R ++ + +
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120
Query: 412 F*TSLXRKRNRVIASRDSN*HTRSAAAPVTVWDXLISKIREXYPXRIMNTYSVVPSPKVS 591
L + N + L+ ++ + + +++ PSP+VS
Sbjct: 121 RLRKLADNCTGLQGFLVFN--AVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVS 178
Query: 592 DTVVEPYN 615
VVEPYN
Sbjct: 179 TAVVEPYN 186
Score = 61.3 bits (142), Expect = 5e-10
Identities = 30/69 (43%), Positives = 44/69 (63%)
Frame = +3
Query: 303 TFRTDLPSGQLRLRTXGAGNNWAKGHYTEGAELVDSXLDVVXKEAESCDCLQGFQLTHSL 482
T+R QL A NN+A+GHYT G E+VD+ L+ + K A++C LQGF + +++
Sbjct: 82 TYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLADNCTGLQGFLVFNAV 141
Query: 483 GGGTGYRMG 509
GGGTG +G
Sbjct: 142 GGGTGSGLG 150
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 83.4 bits (197), Expect = 1e-16
Identities = 57/191 (29%), Positives = 88/191 (46%), Gaps = 8/191 (4%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 240
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 241 VRAPRILVDLEPGTMDSVRSGPFGQIFRPDNFVFGXXAPATTGPRDTTRRVLSSSIXF*T 420
+ VDLEP +D VR+G + Q+F P+ + G A R + I
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARG--HYTVGKEI---V 115
Query: 421 SLXRKRNRVIASRDSN*H---TRSAAAPVT---VWDXLISKIREXYPXRIMNTYSVVPSP 582
L R R +A + +A T + L+ ++ Y + +++ PSP
Sbjct: 116 DLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSP 175
Query: 583 KVSDTVVEPYN 615
+VS VVEPYN
Sbjct: 176 QVSTAVVEPYN 186
Score = 62.9 bits (146), Expect = 2e-10
Identities = 32/69 (46%), Positives = 43/69 (62%)
Frame = +3
Query: 303 TFRTDLPSGQLRLRTXGAGNNWAKGHYTEGAELVDSXLDVVXKEAESCDCLQGFQLTHSL 482
T+R QL A NN+A+GHYT G E+VD LD V K A++C LQGF + +++
Sbjct: 82 TYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAV 141
Query: 483 GGGTGYRMG 509
GGGTG +G
Sbjct: 142 GGGTGSGLG 150
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 83.4 bits (197), Expect = 1e-16
Identities = 57/191 (29%), Positives = 88/191 (46%), Gaps = 8/191 (4%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 240
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 241 VRAPRILVDLEPGTMDSVRSGPFGQIFRPDNFVFGXXAPATTGPRDTTRRVLSSSIXF*T 420
+ VDLEP +D VR+G + Q+F P+ + G A R + I
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARG--HYTVGKEI---V 115
Query: 421 SLXRKRNRVIASRDSN*H---TRSAAAPVT---VWDXLISKIREXYPXRIMNTYSVVPSP 582
L R R +A + +A T + L+ ++ Y + +++ PSP
Sbjct: 116 DLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSP 175
Query: 583 KVSDTVVEPYN 615
+VS VVEPYN
Sbjct: 176 QVSTAVVEPYN 186
Score = 62.9 bits (146), Expect = 2e-10
Identities = 32/69 (46%), Positives = 43/69 (62%)
Frame = +3
Query: 303 TFRTDLPSGQLRLRTXGAGNNWAKGHYTEGAELVDSXLDVVXKEAESCDCLQGFQLTHSL 482
T+R QL A NN+A+GHYT G E+VD LD V K A++C LQGF + +++
Sbjct: 82 TYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAV 141
Query: 483 GGGTGYRMG 509
GGGTG +G
Sbjct: 142 GGGTGSGLG 150
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 82.2 bits (194), Expect = 3e-16
Identities = 58/191 (30%), Positives = 87/191 (45%), Gaps = 8/191 (4%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGQ 240
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E G+
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 241 VRAPRILVDLEPGTMDSVRSGPFGQIFRPDNFVFGXXAPATTGPRDTTRRVLSSSIXF*T 420
+ VDLEP +D VR+G + Q+F P+ + G A R + I
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARG--HYTIGKEI---V 115
Query: 421 SLXRKRNRVIASRDSN*H---TRSAAAPVT---VWDXLISKIREXYPXRIMNTYSVVPSP 582
L R R +A + +A T + L+ ++ Y + ++V PSP
Sbjct: 116 DLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSP 175
Query: 583 KVSDTVVEPYN 615
+VS +VVEPYN
Sbjct: 176 QVSTSVVEPYN 186
Score = 62.1 bits (144), Expect = 3e-10
Identities = 31/69 (44%), Positives = 43/69 (62%)
Frame = +3
Query: 303 TFRTDLPSGQLRLRTXGAGNNWAKGHYTEGAELVDSXLDVVXKEAESCDCLQGFQLTHSL 482
T+R QL A NN+A+GHYT G E+VD LD + K A++C LQGF + +++
Sbjct: 82 TYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV 141
Query: 483 GGGTGYRMG 509
GGGTG +G
Sbjct: 142 GGGTGSGLG 150
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 82.2 bits (194), Expect = 3e-16
Identities = 58/191 (30%), Positives = 87/191 (45%), Gaps = 8/191 (4%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGQ 240
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E G+
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 241 VRAPRILVDLEPGTMDSVRSGPFGQIFRPDNFVFGXXAPATTGPRDTTRRVLSSSIXF*T 420
+ VDLEP +D VR+G + Q+F P+ + G A R + I
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARG--HYTIGKEI---V 115
Query: 421 SLXRKRNRVIASRDSN*H---TRSAAAPVT---VWDXLISKIREXYPXRIMNTYSVVPSP 582
L R R +A + +A T + L+ ++ Y + ++V PSP
Sbjct: 116 DLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSP 175
Query: 583 KVSDTVVEPYN 615
+VS +VVEPYN
Sbjct: 176 QVSTSVVEPYN 186
Score = 62.1 bits (144), Expect = 3e-10
Identities = 31/69 (44%), Positives = 43/69 (62%)
Frame = +3
Query: 303 TFRTDLPSGQLRLRTXGAGNNWAKGHYTEGAELVDSXLDVVXKEAESCDCLQGFQLTHSL 482
T+R QL A NN+A+GHYT G E+VD LD + K A++C LQGF + +++
Sbjct: 82 TYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV 141
Query: 483 GGGTGYRMG 509
GGGTG +G
Sbjct: 142 GGGTGSGLG 150
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 79.8 bits (188), Expect = 1e-15
Identities = 57/191 (29%), Positives = 86/191 (45%), Gaps = 8/191 (4%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 240
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E G+
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 241 VRAPRILVDLEPGTMDSVRSGPFGQIFRPDNFVFGXXAPATTGPRDTTRRVLSSSIXF*T 420
+ VDLEP +D VR+G + Q+F P+ + G A R + I
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARG--HYTIGKEI---V 115
Query: 421 SLXRKRNRVIASRDSN*H---TRSAAAPVT---VWDXLISKIREXYPXRIMNTYSVVPSP 582
L R R +A + +A T + L+ ++ Y + ++V PSP
Sbjct: 116 DLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSP 175
Query: 583 KVSDTVVEPYN 615
+VS +VVEPYN
Sbjct: 176 QVSTSVVEPYN 186
Score = 62.1 bits (144), Expect = 3e-10
Identities = 31/69 (44%), Positives = 43/69 (62%)
Frame = +3
Query: 303 TFRTDLPSGQLRLRTXGAGNNWAKGHYTEGAELVDSXLDVVXKEAESCDCLQGFQLTHSL 482
T+R QL A NN+A+GHYT G E+VD LD + K A++C LQGF + +++
Sbjct: 82 TYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV 141
Query: 483 GGGTGYRMG 509
GGGTG +G
Sbjct: 142 GGGTGSGLG 150
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 79.8 bits (188), Expect = 1e-15
Identities = 57/191 (29%), Positives = 86/191 (45%), Gaps = 8/191 (4%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 240
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E G+
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 241 VRAPRILVDLEPGTMDSVRSGPFGQIFRPDNFVFGXXAPATTGPRDTTRRVLSSSIXF*T 420
+ VDLEP +D VR+G + Q+F P+ + G A R + I
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARG--HYTIGKEI---V 115
Query: 421 SLXRKRNRVIASRDSN*H---TRSAAAPVT---VWDXLISKIREXYPXRIMNTYSVVPSP 582
L R R +A + +A T + L+ ++ Y + ++V PSP
Sbjct: 116 DLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSP 175
Query: 583 KVSDTVVEPYN 615
+VS +VVEPYN
Sbjct: 176 QVSTSVVEPYN 186
Score = 62.1 bits (144), Expect = 3e-10
Identities = 31/69 (44%), Positives = 43/69 (62%)
Frame = +3
Query: 303 TFRTDLPSGQLRLRTXGAGNNWAKGHYTEGAELVDSXLDVVXKEAESCDCLQGFQLTHSL 482
T+R QL A NN+A+GHYT G E+VD LD + K A++C LQGF + +++
Sbjct: 82 TYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV 141
Query: 483 GGGTGYRMG 509
GGGTG +G
Sbjct: 142 GGGTGSGLG 150
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 74.5 bits (175), Expect = 5e-14
Identities = 48/185 (25%), Positives = 87/185 (47%), Gaps = 3/185 (1%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVRA 249
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 250 PRILVDLEPGTMDSVRSGPFGQIFRPDN-FVFGXXAPATTGPRDTTRRVLSSSIXF*TSL 426
+L+DLEP ++ +++G + ++ +N FV A + +
Sbjct: 63 RALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQGKGVEEEIMDMI 122
Query: 427 XRKRNRVIASRD-SN*HTRSAAAPVTVWDXLISKIREXYPXRIMNTYSVVPSP-KVSDTV 600
R+ + + H+ + + L+ + + Y +++ TYSV P+ + SD V
Sbjct: 123 DREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVV 182
Query: 601 VEPYN 615
V+PYN
Sbjct: 183 VQPYN 187
Score = 60.1 bits (139), Expect = 1e-09
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = +3
Query: 351 GAGNNWAKGHYTEGAELVDSXLDVVXKEAESCDCLQGFQLTHSLGGGTGYRMG 509
GAGNNWA G Y +G + + +D++ +EA+ D L+GF L HS+ GGTG MG
Sbjct: 99 GAGNNWASG-YHQGKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMG 150
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 73.7 bits (173), Expect = 9e-14
Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 6/188 (3%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVRA 249
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 250 PRILVDLEPGTMDSVRSGPFGQIFRPDNFVFGXXAPATTGPRDTTRRVLSSSIXF*TSLX 429
+L+DLEP ++ +++G + ++ +N +F G + + +
Sbjct: 63 RALLIDLEPRVINGIQNGEYRNLYNHEN-IFLSDHGGGAGNNWASGYHQGKGVE--EEIM 119
Query: 430 RKRNRVIASRDS-----N*HTRSAAAPVTVWDXLISKIREXYPXRIMNTYSVVPSP-KVS 591
+R DS H+ + + L+ + + Y +++ TYSV P+ + S
Sbjct: 120 DMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETS 179
Query: 592 DTVVEPYN 615
D VV+PYN
Sbjct: 180 DVVVQPYN 187
Score = 60.1 bits (139), Expect = 1e-09
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = +3
Query: 351 GAGNNWAKGHYTEGAELVDSXLDVVXKEAESCDCLQGFQLTHSLGGGTGYRMG 509
GAGNNWA G Y +G + + +D++ +EA+ D L+GF L HS+ GGTG MG
Sbjct: 99 GAGNNWASG-YHQGKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMG 150
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 30.7 bits (66), Expect = 0.83
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGI 156
MREIV IQ G+ N +G+ FW + G+
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGL 30
>At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 304
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -2
Query: 474 VSVGIPGGNHTIPLPX*RRLKXNRRAQHPPCSVPWPSC 361
VS G+PG HT P ++ ++ +++ P S PW SC
Sbjct: 136 VSSGLPGKQHTSSSPPSFVVEPSKNSKYIPSSSPW-SC 172
>At2g38800.1 68415.m04764 calmodulin-binding protein-related
contains similarity to potato calmodulin-binding protein
PCBP GI:17933110 from [Solanum tuberosum]
Length = 612
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -2
Query: 345 SEDEVVRTEDLSERSRXDRVHGAGLQVDEDAR 250
SE+E V+ +DL E+ + +G +VD D++
Sbjct: 221 SEEEFVKMDDLEEKKEFENGNGGSCEVDIDSQ 252
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +3
Query: 420 VVXKEAESCDCLQGFQLTHS 479
VV KEAE+C+CLQ F ++ S
Sbjct: 7 VVRKEAENCNCLQVFFVSGS 26
>At4g26400.2 68417.m03800 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 356
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Frame = -2
Query: 393 HPPCSVPW----PSC--CRRRXSEDEVVRTEDLSERSRXDRVHGAGLQVDEDARGT 244
H C VPW SC CR D+ + + R+R ++ + V++DAR +
Sbjct: 264 HIRCIVPWLELHSSCPVCRYELPPDDETKVNPVRPRTRTLEINVSNENVEDDARNS 319
>At4g26400.1 68417.m03799 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 356
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Frame = -2
Query: 393 HPPCSVPW----PSC--CRRRXSEDEVVRTEDLSERSRXDRVHGAGLQVDEDARGT 244
H C VPW SC CR D+ + + R+R ++ + V++DAR +
Sbjct: 264 HIRCIVPWLELHSSCPVCRYELPPDDETKVNPVRPRTRTLEINVSNENVEDDARNS 319
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 73 EIVHIQAGQCGNQIGAKFWEIISD 144
+I++ A + G+ GA FWE+IS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
>At1g21850.1 68414.m02735 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 551
Score = 27.5 bits (58), Expect = 7.7
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = -2
Query: 249 GTYLPAGGFIVVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSDLVAALTSLDMYDFP 70
G + AGGF + I + + ++ VP G VL+GD DL A L + FP
Sbjct: 132 GFHKAAGGFGAIRISS-RPRIPVPFPAPAGDYTVLIGDWYKTNHKDLRAQLDNGGKLPFP 190
Query: 69 HFVL 58
+L
Sbjct: 191 DGIL 194
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,874,865
Number of Sequences: 28952
Number of extensions: 257241
Number of successful extensions: 729
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 718
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1275599520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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