Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0430
         (628 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    25   0.60 
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   2.4  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    23   2.4  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    23   2.4  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   2.4  

>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -3

Query: 86  NLLIKETNSLL*IMYICHYY 27
           N LI+E++S++   Y CH+Y
Sbjct: 178 NRLIEESSSVMEAAYSCHWY 197


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = +3

Query: 333 FDNSVQIIDAKKGKNVLKRVQL--PPLNLDMLQIGN 434
           F N  QI+D K   NV K++ +     N D+  I N
Sbjct: 508 FSNEEQIVDLKAFNNVPKKLNMFYNNFNSDIKSISN 543


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -1

Query: 523 KCTLHFLKSVFRVAGAQSLIYNNFENIL 440
           K TLH   ++++  G  +     F NIL
Sbjct: 254 KSTLHCWATIYKTEGGNAFFKGAFSNIL 281


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -1

Query: 523 KCTLHFLKSVFRVAGAQSLIYNNFENIL 440
           K TLH   ++++  G  +     F NIL
Sbjct: 254 KSTLHCWATIYKTEGGNAFFKGAFSNIL 281


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = +3

Query: 333 FDNSVQIIDAKKGKNVLKRVQL--PPLNLDMLQIGN 434
           F N  QI+D K   NV K++ +     N D+  I N
Sbjct: 508 FSNEEQIVDLKAFNNVPKKLNMFYNNFNSDIKSISN 543


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,079
Number of Sequences: 438
Number of extensions: 3301
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)