Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0429
         (658 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_06_0113 - 10903419-10903439,10904452-10904726,10905082-109052...    30   1.9  
11_06_0496 - 24325587-24326143,24326658-24327495,24327612-24327764     29   3.3  
04_04_0597 + 26502819-26502853,26503030-26503171,26503929-265041...    28   5.7  
01_06_1137 - 34801750-34801955,34802586-34802856,34802961-348031...    28   5.7  
08_01_0895 - 8806113-8806220,8806642-8806712,8806969-8807155,880...    28   7.5  
04_03_0033 + 9936723-9937019,9937621-9937754,9938966-9939329           27   9.9  
03_05_1143 + 30709825-30709926,30710105-30710260,30710356-307104...    27   9.9  

>10_06_0113 -
           10903419-10903439,10904452-10904726,10905082-10905247,
           10905622-10905766,10905837-10905896,10905979-10906028
          Length = 238

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 19/59 (32%), Positives = 25/59 (42%)
 Frame = -1

Query: 355 FIHCYFYRKLGHSFIYISLF*GEKT*FAAIECFKKGPPLLTTQAPGSSSHISRGSTDGH 179
           F+ C F+     S  Y+    G    +A        PP +TT A G SS  + G TD H
Sbjct: 47  FVQCGFHWDHRKSLNYVGKRCGNPMIYATENSNASVPPKMTTFAGGVSSMQAHGPTDHH 105


>11_06_0496 - 24325587-24326143,24326658-24327495,24327612-24327764
          Length = 515

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = +3

Query: 156 FRTCVNIECPSVEPLEICDDDPGAC 230
           +  C NI C SV P E CD D   C
Sbjct: 161 YERCKNISCQSVLPAEECDCDVCCC 185


>04_04_0597 +
           26502819-26502853,26503030-26503171,26503929-26504186,
           26504276-26504407,26504834-26504980
          Length = 237

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 16/57 (28%), Positives = 27/57 (47%)
 Frame = -1

Query: 181 HSIFTHVLKSLSEKQGLFANTILSTNTSRRKSPSSCLAIFNYGNGKNRILYLYYFVI 11
           H + THVL+   + Q L+   + +TN   R +     AI    +     L L++FV+
Sbjct: 170 HLMSTHVLQQAQQIQYLYDQAVEATNNVERGNKELSQAI-QRNSSSRTFLLLFFFVL 225


>01_06_1137 -
           34801750-34801955,34802586-34802856,34802961-34803153,
           34803754-34803834,34803914-34804039,34804119-34804269,
           34804346-34804490,34805088-34805279
          Length = 454

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 17/72 (23%), Positives = 29/72 (40%)
 Frame = -1

Query: 475 VADITGVFQKLFPCXYKFFCHVYCCFSHYYLCW*TTARKRFIHCYFYRKLGHSFIYISLF 296
           + +I G    +F       C  +   S+  +C+        I   FY K   S I +S++
Sbjct: 88  IIEIVGASDIIFALSQSGVCAAFSRVSNQRICFLNGRPDEVIRSLFYNKNNDSLITVSVY 147

Query: 295 *GEKT*FAAIEC 260
             E   F+A+ C
Sbjct: 148 GSEN--FSALRC 157


>08_01_0895 -
           8806113-8806220,8806642-8806712,8806969-8807155,
           8807473-8807603,8807679-8807811,8808124-8808242,
           8808751-8809039,8809150-8809272,8809300-8809323,
           8810016-8810072,8810148-8810255
          Length = 449

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 10/20 (50%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = -1

Query: 373 TTARKRFIHCYF-YRKLGHS 317
           +T +  F+HCYF Y +LGH+
Sbjct: 430 STKKDSFVHCYFVYLRLGHA 449


>04_03_0033 + 9936723-9937019,9937621-9937754,9938966-9939329
          Length = 264

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/45 (24%), Positives = 25/45 (55%)
 Frame = -3

Query: 203 LQRLDRWTLNIHTCSKIFVRKTRAFCEYNFINQHFKKKKSIILFS 69
           L  L+ W    +  +KI+  KT+ + +    ++ FK ++ ++LF+
Sbjct: 14  LSELEEWRDKAYHNAKIYKDKTKRWHDKRIKHKEFKAREKVLLFN 58


>03_05_1143 +
           30709825-30709926,30710105-30710260,30710356-30710439,
           30710769-30710882,30711019-30711111,30711888-30711977,
           30712157-30712227,30712300-30712374,30712481-30712568,
           30712748-30712806,30712893-30712956,30713030-30713095,
           30713283-30713435,30713522-30713626,30713739-30713974,
           30714104-30714173,30714286-30714339,30714501-30714557,
           30714662-30714741,30716056-30717919
          Length = 1226

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 10/29 (34%), Positives = 22/29 (75%)
 Frame = -1

Query: 217 SSSHISRGSTDGHSIFTHVLKSLSEKQGL 131
           ++++++R S+  HS+FT +++S  E QG+
Sbjct: 191 AATNMNRASSRSHSVFTCLIESKWESQGI 219


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,816,225
Number of Sequences: 37544
Number of extensions: 371283
Number of successful extensions: 943
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)