Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0425
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    28   0.064
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          25   0.45 
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     24   1.4  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    24   1.4  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           24   1.4  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   5.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.5  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   7.3  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    21   7.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.7  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   9.7  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   9.7  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   9.7  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   9.7  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   9.7  

>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 28.3 bits (60), Expect = 0.064
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +2

Query: 557 GHPVSRYSTGSGSLLRASSPLMMSPXAGLKVRAPDVRRRPCRKP 688
           GHP  ++    GSL R+SSP   +P     VR    + +P RKP
Sbjct: 77  GHP--QWPFAWGSLXRSSSPQTSAPTGPPIVRCALRKHKPNRKP 118


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 8/34 (23%), Positives = 19/34 (55%)
 Frame = -1

Query: 293 VGSRSFHTM*WHPYSAITELAISAKKNKDIFPIV 192
           +G + + ++ WH +  +  + +SA   KD  P++
Sbjct: 465 MGIQPYDSLLWHTWMPVMRICVSAWNPKDCDPLI 498


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
 Frame = -1

Query: 443 EYHLERL---RRRADTDHSVVLSIKII*QWF 360
           E+H  R    RRR +  H++VLS + I  WF
Sbjct: 251 EFHYNRYLTRRRRIEIAHTLVLSERQIKIWF 281


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
 Frame = -1

Query: 443 EYHLERL---RRRADTDHSVVLSIKII*QWF 360
           E+H  R    RRR +  H++VLS + I  WF
Sbjct: 251 EFHYNRYLTRRRRIEIAHTLVLSERQIKIWF 281


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
 Frame = -1

Query: 443 EYHLERL---RRRADTDHSVVLSIKII*QWF 360
           E+H  R    RRR +  H++VLS + I  WF
Sbjct: 251 EFHYNRYLTRRRRIEIAHTLVLSERQIKIWF 281


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 613 STDDVTVGGAQGAGARRSPKA 675
           S +DV +GG  G   RRS  A
Sbjct: 162 SAEDVFIGGTTGKLRRRSTAA 182


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 54  LICFYYLLRCFSIXKT 101
           L+C YY  R F I  T
Sbjct: 295 LLCIYYFCRAFIIFPT 310


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 351 PSPEPLSNYLDAQYYGVISIGTPP 422
           P P P+  +  A+Y+   + G PP
Sbjct: 163 PPPPPVYTHHYARYHPYPNFGVPP 186


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 604 GFLSTDDVTVGGAQGAGAR 660
           GFLS +DV++G    AG +
Sbjct: 118 GFLSFEDVSLGVPGNAGLK 136


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +2

Query: 254  KGAITSYENCENPLS*GW 307
            +G +  YE C N +  GW
Sbjct: 2099 RGFLAYYEICTNVIKKGW 2116


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 604 GFLSTDDVTVGGAQG 648
           GFLST+D  V G  G
Sbjct: 154 GFLSTEDDVVPGNNG 168


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 604 GFLSTDDVTVGGAQG 648
           GFLST+D  V G  G
Sbjct: 154 GFLSTEDDVVPGNNG 168


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 604 GFLSTDDVTVGGAQG 648
           GFLST+D  V G  G
Sbjct: 154 GFLSTEDDVVPGNNG 168


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 604 GFLSTDDVTVGGAQG 648
           GFLST+D  V G  G
Sbjct: 154 GFLSTEDDVVPGNNG 168


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 604 GFLSTDDVTVGGAQG 648
           GFLST+D  V G  G
Sbjct: 154 GFLSTEDDVVPGNNG 168


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,969
Number of Sequences: 336
Number of extensions: 3664
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)