BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0425
(698 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF487535-1|AAL93296.1| 494|Anopheles gambiae cytochrome P450 CY... 25 1.7
DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein. 24 4.0
DQ137802-1|AAZ78363.1| 265|Anopheles gambiae female-specific do... 24 5.3
DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific doub... 24 5.3
AY063776-1|AAL59658.1| 224|Anopheles gambiae glutathione S-tran... 23 7.0
AY578805-1|AAT07310.1| 753|Anopheles gambiae medea protein. 23 9.2
>AF487535-1|AAL93296.1| 494|Anopheles gambiae cytochrome P450
CYP6Z1 protein.
Length = 494
Score = 25.4 bits (53), Expect = 1.7
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 204 DIFIFFGADRQLRNGTIRVPLHRM 275
++F+F+GA GTI LH +
Sbjct: 292 NVFLFYGAGADTSTGTITFTLHEL 315
>DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein.
Length = 847
Score = 24.2 bits (50), Expect = 4.0
Identities = 10/42 (23%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = -2
Query: 127 IKIEHCDRNVXSIEKQRSK-**KQIKLCHKSPDIIEKFEKKK 5
+ +E+C++++ +I+KQ+ + ++ +L H+ ++I E +K
Sbjct: 351 LMVEYCEQDIITIDKQKCEAKDREEQLLHEKQNLIRISELEK 392
>DQ137802-1|AAZ78363.1| 265|Anopheles gambiae female-specific
doublesex protein protein.
Length = 265
Score = 23.8 bits (49), Expect = 5.3
Identities = 13/39 (33%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = -1
Query: 593 CRSPYCIAKLGAHSRRTSW-TCGCRTCCAETSDVGVVAL 480
CR+ L H R + TC C CC V+AL
Sbjct: 44 CRNHGLKIGLKGHKRYCKYRTCHCEKCCLTAERQRVMAL 82
>DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific
doublesex protein protein.
Length = 622
Score = 23.8 bits (49), Expect = 5.3
Identities = 13/39 (33%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = -1
Query: 593 CRSPYCIAKLGAHSRRTSW-TCGCRTCCAETSDVGVVAL 480
CR+ L H R + TC C CC V+AL
Sbjct: 44 CRNHGLKIGLKGHKRYCKYRTCHCEKCCLTAERQRVMAL 82
>AY063776-1|AAL59658.1| 224|Anopheles gambiae glutathione
S-transferase E1 protein.
Length = 224
Score = 23.4 bits (48), Expect = 7.0
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 488 VALFGRHPEVGGSGVEYHLERLRRRADT 405
+A+FGR PE+ +EY + R D+
Sbjct: 120 LAIFGRKPEIPEDRIEYVRKAYRLLEDS 147
>AY578805-1|AAT07310.1| 753|Anopheles gambiae medea protein.
Length = 753
Score = 23.0 bits (47), Expect = 9.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 290 GSRSFHTM*WHPYSAITELAISAKKNKDIFP 198
G+ S H H ++A ELA SA +++ P
Sbjct: 192 GTMSMHPQTHHSWAACMELAASADPSRNSGP 222
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 706,023
Number of Sequences: 2352
Number of extensions: 14796
Number of successful extensions: 34
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -