Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0425
         (698 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052119-1|AAK93543.1|  392|Drosophila melanogaster SD07085p pro...   143   2e-34
AF220040-1|AAF23824.1|  392|Drosophila melanogaster cathepsin D ...   143   2e-34
AE013599-512|AAF59186.1|  392|Drosophila melanogaster CG1548-PA ...   143   2e-34
AY113207-1|AAM29212.1|  404|Drosophila melanogaster AT05209p pro...   102   4e-22
AE013599-1891|AAF58249.1|  404|Drosophila melanogaster CG10104-P...   102   4e-22
BT016133-1|AAV37018.1|  372|Drosophila melanogaster GH11417p pro...    73   4e-13
AY069757-1|AAL39902.1|  405|Drosophila melanogaster LP12231p pro...    73   4e-13
AE014134-1530|AAF52686.1|  372|Drosophila melanogaster CG13095-P...    73   4e-13
AE014134-255|AAF51371.1|  405|Drosophila melanogaster CG33128-PA...    73   4e-13
BT021277-1|AAX33425.1|  418|Drosophila melanogaster RE41891p pro...    72   9e-13
AL031173-1|CAA20104.1|  407|Drosophila melanogaster EG:EG0001.1,...    72   9e-13
AE014298-30|AAF45501.1|  407|Drosophila melanogaster CG13374-PA ...    72   9e-13
AY070911-1|AAL48533.1|  391|Drosophila melanogaster RE02351p pro...    70   3e-12
AE014134-1968|AAF53016.1|  391|Drosophila melanogaster CG17134-P...    70   3e-12
AE014297-2351|AAF55418.1|  395|Drosophila melanogaster CG5863-PA...    65   8e-11
AE014134-1967|AAF53015.1|  423|Drosophila melanogaster CG6508-PA...    63   3e-10
AE014297-2350|AAF55417.2|  370|Drosophila melanogaster CG5860-PA...    61   2e-09
AE014134-256|AAF51370.1|  410|Drosophila melanogaster CG31926-PA...    55   1e-07
AE014134-257|AAF51369.1|  393|Drosophila melanogaster CG31661-PA...    54   1e-07
AE014297-2349|AAF55416.1|  465|Drosophila melanogaster CG17283-P...    46   4e-05
AE014134-254|AAF51372.1|  418|Drosophila melanogaster CG31928-PA...    29   4.6  
AY061141-1|AAL28689.1|  582|Drosophila melanogaster LD12022p pro...    29   6.1  
AF247501-1|AAF63389.1|  582|Drosophila melanogaster PINEAPPLE EY...    29   6.1  
AE014134-1879|AAF52945.1|  582|Drosophila melanogaster CG5354-PA...    29   6.1  

>AY052119-1|AAK93543.1|  392|Drosophila melanogaster SD07085p
           protein.
          Length = 392

 Score =  143 bits (346), Expect = 2e-34
 Identities = 66/112 (58%), Positives = 81/112 (72%)
 Frame = +3

Query: 234 QLRNGTIRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSPEPLSNYLDAQYYGVISIG 413
           Q + G +RVPLH+ ++AR HF +VGTEL+ LR++Y   G  PEPLSNY+DAQYYG I+IG
Sbjct: 22  QEKPGLLRVPLHKFQSARRHFADVGTELQQLRIRYG-GGDVPEPLSNYMDAQYYGPIAIG 80

Query: 414 TPPQSFKVVFDTGSSNLWVPSKKCHYTNIACFCXXXXXXXXXXXXXXMGTQF 569
           +PPQ+F+VVFDTGSSNLWVPSKKCH TNIAC                 GT+F
Sbjct: 81  SPPQNFRVVFDTGSSNLWVPSKKCHLTNIACLMHNKYDASKSKTYTKNGTEF 132


>AF220040-1|AAF23824.1|  392|Drosophila melanogaster cathepsin D
           precursor protein.
          Length = 392

 Score =  143 bits (346), Expect = 2e-34
 Identities = 66/112 (58%), Positives = 81/112 (72%)
 Frame = +3

Query: 234 QLRNGTIRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSPEPLSNYLDAQYYGVISIG 413
           Q + G +RVPLH+ ++AR HF +VGTEL+ LR++Y   G  PEPLSNY+DAQYYG I+IG
Sbjct: 22  QEKPGLLRVPLHKFQSARRHFADVGTELQQLRIRYG-GGDVPEPLSNYMDAQYYGPIAIG 80

Query: 414 TPPQSFKVVFDTGSSNLWVPSKKCHYTNIACFCXXXXXXXXXXXXXXMGTQF 569
           +PPQ+F+VVFDTGSSNLWVPSKKCH TNIAC                 GT+F
Sbjct: 81  SPPQNFRVVFDTGSSNLWVPSKKCHLTNIACLMHNKYDASKSKTYTKNGTEF 132


>AE013599-512|AAF59186.1|  392|Drosophila melanogaster CG1548-PA
           protein.
          Length = 392

 Score =  143 bits (346), Expect = 2e-34
 Identities = 66/112 (58%), Positives = 81/112 (72%)
 Frame = +3

Query: 234 QLRNGTIRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSPEPLSNYLDAQYYGVISIG 413
           Q + G +RVPLH+ ++AR HF +VGTEL+ LR++Y   G  PEPLSNY+DAQYYG I+IG
Sbjct: 22  QEKPGLLRVPLHKFQSARRHFADVGTELQQLRIRYG-GGDVPEPLSNYMDAQYYGPIAIG 80

Query: 414 TPPQSFKVVFDTGSSNLWVPSKKCHYTNIACFCXXXXXXXXXXXXXXMGTQF 569
           +PPQ+F+VVFDTGSSNLWVPSKKCH TNIAC                 GT+F
Sbjct: 81  SPPQNFRVVFDTGSSNLWVPSKKCHLTNIACLMHNKYDASKSKTYTKNGTEF 132


>AY113207-1|AAM29212.1|  404|Drosophila melanogaster AT05209p
           protein.
          Length = 404

 Score =  102 bits (245), Expect = 4e-22
 Identities = 53/94 (56%), Positives = 65/94 (69%), Gaps = 10/94 (10%)
 Frame = +3

Query: 255 RVPLHRMKTARTHFHEVGTELELLRLKY--DVTGPSPE--------PLSNYLDAQYYGVI 404
           RVPL R  +AR  F ++G  ++ LRLKY  +V+    E        PLSNYLDAQY+G I
Sbjct: 30  RVPLRRFPSARHRFEKLGIRMDRLRLKYAEEVSHFRGEWNSAVKSTPLSNYLDAQYFGPI 89

Query: 405 SIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIAC 506
           +IGTPPQ+FKV+FDTGSSNLWVPS  C  T +AC
Sbjct: 90  TIGTPPQTFKVIFDTGSSNLWVPSATCASTMVAC 123


>AE013599-1891|AAF58249.1|  404|Drosophila melanogaster CG10104-PA
           protein.
          Length = 404

 Score =  102 bits (245), Expect = 4e-22
 Identities = 53/94 (56%), Positives = 65/94 (69%), Gaps = 10/94 (10%)
 Frame = +3

Query: 255 RVPLHRMKTARTHFHEVGTELELLRLKY--DVTGPSPE--------PLSNYLDAQYYGVI 404
           RVPL R  +AR  F ++G  ++ LRLKY  +V+    E        PLSNYLDAQY+G I
Sbjct: 30  RVPLRRFPSARHRFEKLGIRMDRLRLKYAEEVSHFRGEWNSAVKSTPLSNYLDAQYFGPI 89

Query: 405 SIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIAC 506
           +IGTPPQ+FKV+FDTGSSNLWVPS  C  T +AC
Sbjct: 90  TIGTPPQTFKVIFDTGSSNLWVPSATCASTMVAC 123


>BT016133-1|AAV37018.1|  372|Drosophila melanogaster GH11417p
           protein.
          Length = 372

 Score = 72.9 bits (171), Expect = 4e-13
 Identities = 39/80 (48%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
 Frame = +3

Query: 255 RVPLHRMKTARTHFHEVGTELELLRLKYDVTG---PSPEPLSNYLDAQYYGVISIGTPPQ 425
           RVP+ + +        V  E   LR KY +        E LSN ++  YYG ISIGTP Q
Sbjct: 21  RVPILKEQNFVKTRQNVLAEKSYLRTKYQLPSLRSVDEEQLSNSMNMAYYGAISIGTPAQ 80

Query: 426 SFKVVFDTGSSNLWVPSKKC 485
           SFKV+FD+GSSNLWVPS  C
Sbjct: 81  SFKVLFDSGSSNLWVPSNTC 100



 Score = 36.3 bits (80), Expect = 0.040
 Identities = 17/27 (62%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +2

Query: 512 HNKYDSRKSKTYVANGHPVS-RYSTGS 589
           HN+YDS  S TYVANG   S +Y TGS
Sbjct: 108 HNQYDSSASSTYVANGESFSIQYGTGS 134


>AY069757-1|AAL39902.1|  405|Drosophila melanogaster LP12231p
           protein.
          Length = 405

 Score = 72.9 bits (171), Expect = 4e-13
 Identities = 31/49 (63%), Positives = 38/49 (77%)
 Frame = +3

Query: 360 EPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIAC 506
           E L N ++  YYG+I IGTP Q FKVVFDTGS+NLWVPS +C  T++AC
Sbjct: 83  EELGNSMNMYYYGLIGIGTPEQYFKVVFDTGSANLWVPSAQCLATDVAC 131



 Score = 29.5 bits (63), Expect = 4.6
 Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = +2

Query: 512 HNKYDSRKSKTYVANGHPVS-RYSTGSGS 595
           HN+Y+S  S T+V++G   S +Y TGS S
Sbjct: 134 HNQYNSSASSTFVSSGQNFSIQYGTGSVS 162


>AE014134-1530|AAF52686.1|  372|Drosophila melanogaster CG13095-PA
           protein.
          Length = 372

 Score = 72.9 bits (171), Expect = 4e-13
 Identities = 39/80 (48%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
 Frame = +3

Query: 255 RVPLHRMKTARTHFHEVGTELELLRLKYDVTG---PSPEPLSNYLDAQYYGVISIGTPPQ 425
           RVP+ + +        V  E   LR KY +        E LSN ++  YYG ISIGTP Q
Sbjct: 21  RVPILKEQNFVKTRQNVLAEKSYLRTKYQLPSLRSVDEEQLSNSMNMAYYGAISIGTPAQ 80

Query: 426 SFKVVFDTGSSNLWVPSKKC 485
           SFKV+FD+GSSNLWVPS  C
Sbjct: 81  SFKVLFDSGSSNLWVPSNTC 100



 Score = 36.3 bits (80), Expect = 0.040
 Identities = 17/27 (62%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +2

Query: 512 HNKYDSRKSKTYVANGHPVS-RYSTGS 589
           HN+YDS  S TYVANG   S +Y TGS
Sbjct: 108 HNQYDSSASSTYVANGESFSIQYGTGS 134


>AE014134-255|AAF51371.1|  405|Drosophila melanogaster CG33128-PA
           protein.
          Length = 405

 Score = 72.9 bits (171), Expect = 4e-13
 Identities = 31/49 (63%), Positives = 38/49 (77%)
 Frame = +3

Query: 360 EPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIAC 506
           E L N ++  YYG+I IGTP Q FKVVFDTGS+NLWVPS +C  T++AC
Sbjct: 83  EELGNSMNMYYYGLIGIGTPEQYFKVVFDTGSANLWVPSAQCLATDVAC 131



 Score = 29.5 bits (63), Expect = 4.6
 Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = +2

Query: 512 HNKYDSRKSKTYVANGHPVS-RYSTGSGS 595
           HN+Y+S  S T+V++G   S +Y TGS S
Sbjct: 134 HNQYNSSASSTFVSSGQNFSIQYGTGSVS 162


>BT021277-1|AAX33425.1|  418|Drosophila melanogaster RE41891p
           protein.
          Length = 418

 Score = 71.7 bits (168), Expect = 9e-13
 Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
 Frame = +3

Query: 243 NGTIR-VPLHRMKTARTHFHEVGTELELLRLKYD----VTGPSPEPLSNYLDAQYYGVIS 407
           N T+R +P+ +    +     +  E + ++ KY+      G   E LSNY + QYYG IS
Sbjct: 34  NSTLRRIPIQKSPNFKRSHKNIVAERDFVQQKYNRQYTANGYPMEHLSNYDNFQYYGNIS 93

Query: 408 IGTPPQSFKVVFDTGSSNLWVPSKKC 485
           IGTP Q F V FDTGSSNLWVP   C
Sbjct: 94  IGTPGQDFLVQFDTGSSNLWVPGSSC 119


>AL031173-1|CAA20104.1|  407|Drosophila melanogaster
           EG:EG0001.1,FBgn0011822;pcl protein.
          Length = 407

 Score = 71.7 bits (168), Expect = 9e-13
 Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
 Frame = +3

Query: 243 NGTIR-VPLHRMKTARTHFHEVGTELELLRLKYD----VTGPSPEPLSNYLDAQYYGVIS 407
           N T+R +P+ +    +     +  E + ++ KY+      G   E LSNY + QYYG IS
Sbjct: 23  NSTLRRIPIQKSPNFKRSHKNIVAERDFVQQKYNRQYTANGYPMEHLSNYDNFQYYGNIS 82

Query: 408 IGTPPQSFKVVFDTGSSNLWVPSKKC 485
           IGTP Q F V FDTGSSNLWVP   C
Sbjct: 83  IGTPGQDFLVQFDTGSSNLWVPGSSC 108


>AE014298-30|AAF45501.1|  407|Drosophila melanogaster CG13374-PA
           protein.
          Length = 407

 Score = 71.7 bits (168), Expect = 9e-13
 Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
 Frame = +3

Query: 243 NGTIR-VPLHRMKTARTHFHEVGTELELLRLKYD----VTGPSPEPLSNYLDAQYYGVIS 407
           N T+R +P+ +    +     +  E + ++ KY+      G   E LSNY + QYYG IS
Sbjct: 23  NSTLRRIPIQKSPNFKRSHKNIVAERDFVQQKYNRQYTANGYPMEHLSNYDNFQYYGNIS 82

Query: 408 IGTPPQSFKVVFDTGSSNLWVPSKKC 485
           IGTP Q F V FDTGSSNLWVP   C
Sbjct: 83  IGTPGQDFLVQFDTGSSNLWVPGSSC 108


>AY070911-1|AAL48533.1|  391|Drosophila melanogaster RE02351p
           protein.
          Length = 391

 Score = 70.1 bits (164), Expect = 3e-12
 Identities = 29/49 (59%), Positives = 37/49 (75%)
 Frame = +3

Query: 360 EPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIAC 506
           E L N ++ +YYGVI+IGTP Q F ++FDTGS+NLWVPS  C  +N AC
Sbjct: 66  ENLHNSMNNEYYGVIAIGTPEQRFNILFDTGSANLWVPSASCPASNTAC 114



 Score = 36.3 bits (80), Expect = 0.040
 Identities = 17/27 (62%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +2

Query: 512 HNKYDSRKSKTYVANGHPVS-RYSTGS 589
           HNKYDS  S TYVANG   +  Y TGS
Sbjct: 117 HNKYDSSASSTYVANGEEFAIEYGTGS 143


>AE014134-1968|AAF53016.1|  391|Drosophila melanogaster CG17134-PA
           protein.
          Length = 391

 Score = 70.1 bits (164), Expect = 3e-12
 Identities = 29/49 (59%), Positives = 37/49 (75%)
 Frame = +3

Query: 360 EPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIAC 506
           E L N ++ +YYGVI+IGTP Q F ++FDTGS+NLWVPS  C  +N AC
Sbjct: 66  ENLHNSMNNEYYGVIAIGTPEQRFNILFDTGSANLWVPSASCPASNTAC 114



 Score = 36.3 bits (80), Expect = 0.040
 Identities = 17/27 (62%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +2

Query: 512 HNKYDSRKSKTYVANGHPVS-RYSTGS 589
           HNKYDS  S TYVANG   +  Y TGS
Sbjct: 117 HNKYDSSASSTYVANGEEFAIEYGTGS 143


>AE014297-2351|AAF55418.1|  395|Drosophila melanogaster CG5863-PA
           protein.
          Length = 395

 Score = 65.3 bits (152), Expect = 8e-11
 Identities = 28/53 (52%), Positives = 38/53 (71%)
 Frame = +3

Query: 348 GPSPEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIAC 506
           G + E L N L+ +Y G ISIG+P Q F ++FDTGS+NLWVPS +C   ++AC
Sbjct: 67  GGATETLDNRLNLEYAGPISIGSPGQPFNMLFDTGSANLWVPSAECSPKSVAC 119


>AE014134-1967|AAF53015.1|  423|Drosophila melanogaster CG6508-PA
           protein.
          Length = 423

 Score = 63.3 bits (147), Expect = 3e-10
 Identities = 36/88 (40%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
 Frame = +3

Query: 255 RVPLHRMKTARTHFHEVGTELELLRLKYDV----TGPSPEPLSNYLDAQYYGVISIGTPP 422
           R P+ R          V  E  LL  KY +    +  + + L+N  + +Y   + IGTPP
Sbjct: 25  RTPITRQINQNKTHANVKAEKILLAAKYFLVDRQSSQTTQVLANGFNLEYTIRLCIGTPP 84

Query: 423 QSFKVVFDTGSSNLWVPSKKCHYTNIAC 506
           Q F + FDTGSS+LWVPS KC  TN AC
Sbjct: 85  QCFNLQFDTGSSDLWVPSVKCSSTNEAC 112


>AE014297-2350|AAF55417.2|  370|Drosophila melanogaster CG5860-PA
           protein.
          Length = 370

 Score = 60.9 bits (141), Expect = 2e-09
 Identities = 24/47 (51%), Positives = 33/47 (70%)
 Frame = +3

Query: 366 LSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIAC 506
           L  + + +YYG I++G P Q+F V+FDTGSSN W+PS  C  +N AC
Sbjct: 56  LQTHNNMEYYGTIAMGNPRQNFTVIFDTGSSNTWLPSVNCPMSNSAC 102


>AE014134-256|AAF51370.1|  410|Drosophila melanogaster CG31926-PA
           protein.
          Length = 410

 Score = 54.8 bits (126), Expect = 1e-07
 Identities = 23/48 (47%), Positives = 28/48 (58%)
 Frame = +3

Query: 342 VTGPSPEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKC 485
           V G     L N  + +YY  +  G PPQ  KV+ DTGS+NLWV S KC
Sbjct: 74  VPGSKVATLENLYNTEYYTTLGFGNPPQDLKVLIDTGSANLWVLSSKC 121


>AE014134-257|AAF51369.1|  393|Drosophila melanogaster CG31661-PA
           protein.
          Length = 393

 Score = 54.4 bits (125), Expect = 1e-07
 Identities = 24/49 (48%), Positives = 31/49 (63%)
 Frame = +3

Query: 360 EPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIAC 506
           EPL N  D  ++GV+S+G   QSF + FDTGSS+ WVPS  C +    C
Sbjct: 78  EPLINSYDTNFFGVVSVGD--QSFTMQFDTGSSDFWVPSSHCRFCIKTC 124


>AE014297-2349|AAF55416.1|  465|Drosophila melanogaster CG17283-PA
           protein.
          Length = 465

 Score = 46.4 bits (105), Expect = 4e-05
 Identities = 20/40 (50%), Positives = 26/40 (65%)
 Frame = +3

Query: 366 LSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKC 485
           L N  + +Y   ++IGTP Q F V+ DTGSSN+WVP   C
Sbjct: 142 LKNTANMEYTCKMNIGTPKQKFTVLPDTGSSNIWVPGPHC 181


>AE014134-254|AAF51372.1|  418|Drosophila melanogaster CG31928-PA
           protein.
          Length = 418

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
 Frame = +3

Query: 231 RQLRNGTIRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSPEPLSNYLDAQYYGVISI 410
           R+  +  I    H  K          ++L +  +    T  S E L N  + +YY     
Sbjct: 39  RETNHTKILSSFHNQKLRLKEKLSPTSDLAISSVSVYQTTVSKENLINSHNTEYYVTAGF 98

Query: 411 GTP-PQSFKVVFDTGSSNLWVPSKK 482
           GTP  Q   ++ DT S+NL V S +
Sbjct: 99  GTPKSQPVTLLVDTASANLLVYSSE 123


>AY061141-1|AAL28689.1|  582|Drosophila melanogaster LD12022p
           protein.
          Length = 582

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -1

Query: 593 CRSPYCIAKLGAHSRRTSWTCGCRTCCAETS 501
           C  P C+   G    R SW   C + CA TS
Sbjct: 225 CDQPNCLCPSGRTYNRLSWVILCCSSCAATS 255


>AF247501-1|AAF63389.1|  582|Drosophila melanogaster PINEAPPLE EYE
           protein.
          Length = 582

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -1

Query: 593 CRSPYCIAKLGAHSRRTSWTCGCRTCCAETS 501
           C  P C+   G    R SW   C + CA TS
Sbjct: 225 CDQPNCLCPSGRTYNRLSWVILCCSSCAATS 255


>AE014134-1879|AAF52945.1|  582|Drosophila melanogaster CG5354-PA
           protein.
          Length = 582

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -1

Query: 593 CRSPYCIAKLGAHSRRTSWTCGCRTCCAETS 501
           C  P C+   G    R SW   C + CA TS
Sbjct: 225 CDQPNCLCPSGRTYNRLSWVILCCSSCAATS 255


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,324,936
Number of Sequences: 53049
Number of extensions: 697444
Number of successful extensions: 1947
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1937
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)