Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0425
         (698 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    21   8.5  
EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor 1-a...    21   8.5  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   8.5  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           21   8.5  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    21   8.5  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   8.5  

>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 456 SNLWVPSKKCHYTNIAC 506
           SN + P   CH  +IAC
Sbjct: 354 SNGYTPVLDCHTAHIAC 370


>EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor
           1-alpha protein.
          Length = 119

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 456 SNLWVPSKKCHYTNIAC 506
           SN + P   CH  +IAC
Sbjct: 65  SNGYTPVLDCHTAHIAC 81


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 604 GFLSTDDVTVGGAQG 648
           GFLST+D  V G  G
Sbjct: 164 GFLSTEDEVVPGNMG 178


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 604 GFLSTDDVTVGGAQG 648
           GFLST+D  V G  G
Sbjct: 35  GFLSTEDEVVPGNMG 49


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 456 SNLWVPSKKCHYTNIAC 506
           SN + P   CH  +IAC
Sbjct: 354 SNGYTPVLDCHTAHIAC 370


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 604 GFLSTDDVTVGGAQG 648
           GFLST+D  V G  G
Sbjct: 164 GFLSTEDEVVPGNMG 178


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,737
Number of Sequences: 438
Number of extensions: 4726
Number of successful extensions: 21
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)