Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0424
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   2.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.2  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   4.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.2  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   4.2  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    22   5.5  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   7.3  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   9.7  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = -1

Query: 179 VRDYFPELCSDLIPALTRLDVDDFPHDCTKNLEPPESNIK 60
           V D  P LC+ LI +   L  D        NL+  + N+K
Sbjct: 41  VEDIDPTLCTHLIYSFVGLGDDSRIKHLEPNLDVNQGNLK 80


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
 Frame = +3

Query: 141  NQIGAKFWEVISDEHGIDATGAYSGD-----SDLQLERINVYYTKLQGASTSREL*WWTL 305
            N+I  + W V  D  G     AY GD      D++  R    Y K +G   +     WT+
Sbjct: 911  NRIRNQRWIVNRDTSGATGPFAYHGDQWVGFEDIKSVRDKAEYIKTKGFGGAVA---WTI 967

Query: 306  SLEPWT 323
             L+ ++
Sbjct: 968  DLDDFS 973


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/18 (44%), Positives = 14/18 (77%), Gaps = 2/18 (11%)
 Frame = -2

Query: 472 CFFSNYIQYR--INQFSP 425
           C+++N+ QYR  I +F+P
Sbjct: 91  CYYTNWSQYRVKIGKFTP 108


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +2

Query: 23   FFFYMIKFSKV 55
            +FFY++KF KV
Sbjct: 1028 YFFYLVKFYKV 1038


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +2

Query: 23  FFFYMIKFSKV 55
           +FFY++KF KV
Sbjct: 309 YFFYLVKFYKV 319


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = -3

Query: 603 GKRIHNTIWILFTDFGNQKSPHTRSSTSSQRIV 505
           G      IW+  T F N+K  +   +T+S   +
Sbjct: 115 GSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI 147


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 488 LQGFQLTILWEEVLDLVW 541
           L G  LT+  +E LDLVW
Sbjct: 149 LFGDLLTLFIKEELDLVW 166


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -1

Query: 431 QPPLCNVLSPSYSPPQTVR 375
           +P +C +   SY+ P T++
Sbjct: 248 KPNVCRICGKSYARPSTLK 266


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,874
Number of Sequences: 336
Number of extensions: 4121
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)