Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0424
(698 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 180 8e-46
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 180 1e-45
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 177 9e-45
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 172 2e-43
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 144 6e-35
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 107 6e-24
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 1e-21
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 2e-21
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 99 2e-21
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 99 2e-21
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 99 3e-21
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 98 7e-21
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 1e-20
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 97 1e-20
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 94 9e-20
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 71 1e-12
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 70 2e-12
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 67 1e-11
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 65 6e-11
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 55 6e-08
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 53 3e-07
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 43 2e-04
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 41 8e-04
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 31 0.90
SB_55131| Best HMM Match : fn3 (HMM E-Value=0.0083) 30 2.1
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 29 2.7
SB_23752| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_34911| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 180 bits (439), Expect = 8e-46
Identities = 94/137 (68%), Positives = 98/137 (71%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
EA+GGKYVPRAV+VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL
Sbjct: 266 EATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 325
Query: 437 VDSVLDVVRKEAEGCDCLQGFQLTILWEEVLDLVWGLF*FPKSVKSIQIVL*IRFPWYQV 616
VDSVLDVVRKEAE CDCLQGFQLT G K + + F
Sbjct: 326 VDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPS 385
Query: 617 QXFPILWVEPYNATLSV 667
VEPYNATLSV
Sbjct: 386 PKVSDTVVEPYNATLSV 402
Score = 107 bits (258), Expect = 6e-24
Identities = 48/56 (85%), Positives = 49/56 (87%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYTKLQG 269
MREIVH QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLERINVYY + G
Sbjct: 214 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATG 269
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/28 (67%), Positives = 19/28 (67%)
Frame = +1
Query: 553 ISKIREEYPDRIMNTFXXXXXXXXXDTV 636
ISKIREEYPDRIMNTF DTV
Sbjct: 365 ISKIREEYPDRIMNTFSVVPSPKVSDTV 392
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 180 bits (438), Expect = 1e-45
Identities = 93/137 (67%), Positives = 98/137 (71%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
EA+GGKYVPRA++VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL
Sbjct: 53 EATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Query: 437 VDSVLDVVRKEAEGCDCLQGFQLTILWEEVLDLVWGLF*FPKSVKSIQIVL*IRFPWYQV 616
VDSVLDVVRKEAE CDCLQGFQLT G K + + F
Sbjct: 113 VDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPS 172
Query: 617 QXFPILWVEPYNATLSV 667
VEPYNATLSV
Sbjct: 173 PKVSDTVVEPYNATLSV 189
Score = 107 bits (258), Expect = 6e-24
Identities = 48/56 (85%), Positives = 49/56 (87%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYTKLQG 269
MREIVH QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLERINVYY + G
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATG 56
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/28 (67%), Positives = 19/28 (67%)
Frame = +1
Query: 553 ISKIREEYPDRIMNTFXXXXXXXXXDTV 636
ISKIREEYPDRIMNTF DTV
Sbjct: 152 ISKIREEYPDRIMNTFSVVPSPKVSDTV 179
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 177 bits (430), Expect = 9e-45
Identities = 90/137 (65%), Positives = 98/137 (71%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
EA+GGKYVPR+V++DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL
Sbjct: 53 EATGGKYVPRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Query: 437 VDSVLDVVRKEAEGCDCLQGFQLTILWEEVLDLVWGLF*FPKSVKSIQIVL*IRFPWYQV 616
+DSVLDVVRKEAE CDC+QGFQLT G K + + F
Sbjct: 113 MDSVLDVVRKEAESCDCIQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSIVPS 172
Query: 617 QXFPILWVEPYNATLSV 667
VEPYNATLSV
Sbjct: 173 PKVSDTVVEPYNATLSV 189
Score = 105 bits (252), Expect = 3e-23
Identities = 47/56 (83%), Positives = 49/56 (87%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYTKLQG 269
MREIV +QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLERINVYY + G
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATG 56
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/28 (67%), Positives = 19/28 (67%)
Frame = +1
Query: 553 ISKIREEYPDRIMNTFXXXXXXXXXDTV 636
ISKIREEYPDRIMNTF DTV
Sbjct: 152 ISKIREEYPDRIMNTFSIVPSPKVSDTV 179
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 172 bits (419), Expect = 2e-43
Identities = 77/80 (96%), Positives = 79/80 (98%)
Frame = +2
Query: 269 GKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 448
GKYVPRAV+VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 61
Query: 449 LDVVRKEAEGCDCLQGFQLT 508
LDVVRKEAE CDC+QGFQLT
Sbjct: 62 LDVVRKEAESCDCIQGFQLT 81
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/28 (64%), Positives = 18/28 (64%)
Frame = +1
Query: 553 ISKIREEYPDRIMNTFXXXXXXXXXDTV 636
I KIREEYPDRIMNTF DTV
Sbjct: 97 ILKIREEYPDRIMNTFSVVPSPKVSDTV 124
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 144 bits (349), Expect = 6e-35
Identities = 59/81 (72%), Positives = 72/81 (88%)
Frame = +2
Query: 263 SGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 442
+GG+YVPR+++VDLEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D
Sbjct: 11 TGGRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELID 70
Query: 443 SVLDVVRKEAEGCDCLQGFQL 505
++ DV+RKEAE CDC+QG QL
Sbjct: 71 NIFDVLRKEAENCDCMQGVQL 91
Score = 31.5 bits (68), Expect = 0.68
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +1
Query: 553 ISKIREEYPDRIMNTF 600
+SKIREEYPDRI++ F
Sbjct: 108 LSKIREEYPDRILSAF 123
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 107 bits (258), Expect = 6e-24
Identities = 48/56 (85%), Positives = 49/56 (87%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYTKLQG 269
MREIVH QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLERINVYY + G
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATG 56
Score = 86.2 bits (204), Expect = 2e-17
Identities = 37/40 (92%), Positives = 40/40 (100%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVF 376
EA+GGKYVPRA++VDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 53 EATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 100 bits (240), Expect = 1e-21
Identities = 43/81 (53%), Positives = 58/81 (71%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRAV DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 55 ETGSGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEM 114
Query: 437 VDSVLDVVRKEAEGCDCLQGF 499
+D+VLD +RK A+GC LQGF
Sbjct: 115 IDTVLDRLRKLADGCTGLQGF 135
Score = 37.1 bits (82), Expect = 0.014
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 227
MRE + + GQ G Q+G WE+ EHGI G D +
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 42
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 99 bits (238), Expect = 2e-21
Identities = 44/81 (54%), Positives = 57/81 (70%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E
Sbjct: 426 ETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQ 485
Query: 437 VDSVLDVVRKEAEGCDCLQGF 499
+D VLD +RK A+GC LQGF
Sbjct: 486 IDIVLDRLRKLADGCTGLQGF 506
Score = 97.5 bits (232), Expect = 9e-21
Identities = 42/81 (51%), Positives = 56/81 (69%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRAV DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 859 ETGAGKHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEM 918
Query: 437 VDSVLDVVRKEAEGCDCLQGF 499
+D VLD +RK A+ C LQGF
Sbjct: 919 IDLVLDRIRKLADQCTGLQGF 939
Score = 36.7 bits (81), Expect = 0.018
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 105 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 227
RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 413
Score = 35.1 bits (77), Expect = 0.055
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 105 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 227
RE + + GQ G Q+G WE+ EHGI G D +
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 846
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 99 bits (238), Expect = 2e-21
Identities = 45/81 (55%), Positives = 57/81 (70%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRAV VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+
Sbjct: 55 ETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEI 114
Query: 437 VDSVLDVVRKEAEGCDCLQGF 499
VD VLD +RK A+ C LQGF
Sbjct: 115 VDLVLDRIRKLADQCTGLQGF 135
Score = 99.5 bits (237), Expect = 2e-21
Identities = 44/81 (54%), Positives = 57/81 (70%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 488 ETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEI 547
Query: 437 VDSVLDVVRKEAEGCDCLQGF 499
VD VLD +RK A+ C LQGF
Sbjct: 548 VDLVLDRIRKLADQCTGLQGF 568
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 227
MRE + I GQ G QIG WE+ EHGI G D +
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 42
Score = 36.7 bits (81), Expect = 0.018
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 105 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 227
RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 475
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 99 bits (238), Expect = 2e-21
Identities = 44/81 (54%), Positives = 57/81 (70%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL
Sbjct: 640 ETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEL 699
Query: 437 VDSVLDVVRKEAEGCDCLQGF 499
+D VLD +RK A+ C LQGF
Sbjct: 700 IDLVLDRIRKLADQCTGLQGF 720
Score = 99.1 bits (236), Expect = 3e-21
Identities = 44/81 (54%), Positives = 57/81 (70%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 119 ETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 178
Query: 437 VDSVLDVVRKEAEGCDCLQGF 499
VD VLD +RK A+ C LQGF
Sbjct: 179 VDLVLDRIRKLADQCTGLQGF 199
Score = 37.1 bits (82), Expect = 0.014
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 99 IMREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 227
+ RE + + GQ G QIG WE+ EHGI G D +
Sbjct: 64 LQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 106
Score = 37.1 bits (82), Expect = 0.014
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 227
+RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 627
Score = 36.7 bits (81), Expect = 0.018
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 105 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 227
RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 554
Score = 31.9 bits (69), Expect = 0.51
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSV 328
E GK+VPRAV VDLEP + +
Sbjct: 567 ETGAGKHVPRAVFVDLEPTVRECI 590
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 99.1 bits (236), Expect = 3e-21
Identities = 43/81 (53%), Positives = 57/81 (70%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 54 ETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEI 113
Query: 437 VDSVLDVVRKEAEGCDCLQGF 499
+D VLD +RK A+ C LQGF
Sbjct: 114 IDLVLDRIRKLADQCTGLQGF 134
Score = 36.7 bits (81), Expect = 0.018
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 105 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 227
RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 41
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 97.9 bits (233), Expect = 7e-21
Identities = 41/81 (50%), Positives = 57/81 (70%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRAV VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G +
Sbjct: 473 ETGAGKHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDH 532
Query: 437 VDSVLDVVRKEAEGCDCLQGF 499
+D+VLD +RK A+ C LQGF
Sbjct: 533 IDNVLDRIRKLADQCSGLQGF 553
Score = 94.3 bits (224), Expect = 9e-20
Identities = 41/81 (50%), Positives = 56/81 (69%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRAV DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G +L
Sbjct: 40 ETGAGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQL 99
Query: 437 VDSVLDVVRKEAEGCDCLQGF 499
++ VLD +RK A+ C LQGF
Sbjct: 100 IEIVLDRLRKLADQCTGLQGF 120
Score = 35.9 bits (79), Expect = 0.032
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 105 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 227
RE V I GQ G Q+G WE+ EHGI G D +
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 460
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 97.1 bits (231), Expect = 1e-20
Identities = 41/81 (50%), Positives = 58/81 (71%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
EA+ GKYVPRAV+VDLEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G E+
Sbjct: 966 EAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEM 1025
Query: 437 VDSVLDVVRKEAEGCDCLQGF 499
V+ V+D +RK + C LQGF
Sbjct: 1026 VEVVMDKIRKMTDQCSGLQGF 1046
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 97.1 bits (231), Expect = 1e-20
Identities = 43/81 (53%), Positives = 56/81 (69%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 55 ETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 114
Query: 437 VDSVLDVVRKEAEGCDCLQGF 499
+D VLD RK A+ C LQGF
Sbjct: 115 IDLVLDRCRKLADQCTGLQGF 135
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 227
MRE + I GQ G Q+G WE+ EHGI G D +
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 42
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 94.3 bits (224), Expect = 9e-20
Identities = 41/81 (50%), Positives = 55/81 (67%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRAV VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E
Sbjct: 20 ETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEH 79
Query: 437 VDSVLDVVRKEAEGCDCLQGF 499
+D LD +RK A+ C LQGF
Sbjct: 80 IDLALDRIRKLADQCTGLQGF 100
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 72.9 bits (171), Expect = 2e-13
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +2
Query: 320 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGF 499
D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 70.5 bits (165), Expect = 1e-12
Identities = 30/58 (51%), Positives = 41/58 (70%)
Frame = +2
Query: 326 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGF 499
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 60
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 70.1 bits (164), Expect = 2e-12
Identities = 37/81 (45%), Positives = 47/81 (58%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRAV VDLEP + P+ + G+ A NN+A+GHYT G +
Sbjct: 55 ETGAGKHVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYTIGKQQ 104
Query: 437 VDSVLDVVRKEAEGCDCLQGF 499
VD VLD +RK A+ C LQGF
Sbjct: 105 VDQVLDRLRKLADQCSGLQGF 125
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 218
MRE + I GQ G QIG WE+ EHGI G D
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSD 39
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 66.9 bits (156), Expect = 1e-11
Identities = 28/42 (66%), Positives = 34/42 (80%)
Frame = +2
Query: 380 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGFQL 505
Q+ A NNWAKG YTEGAEL+DS +D +RK AE CD +QGFQ+
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQI 43
Score = 31.5 bits (68), Expect = 0.68
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 553 ISKIREEYPDRIMNTFXXXXXXXXXDTV 636
+SKIREEYPDR++++F +TV
Sbjct: 60 LSKIREEYPDRLVSSFCVLPSPLVSETV 87
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 64.9 bits (151), Expect = 6e-11
Identities = 27/58 (46%), Positives = 39/58 (67%)
Frame = +2
Query: 326 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGF 499
+R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK A+ C LQGF
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGF 60
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +2
Query: 326 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 466
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 54.8 bits (126), Expect = 6e-08
Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Frame = +2
Query: 284 RAVMVDLEPGTMDSVRS--GPFGQIFRPDNFVFGQS-GAGNNWAKGHYTEGAELVDSVLD 454
RAV +D+E + S G P F Q G+GNNWA G G + +D VLD
Sbjct: 67 RAVSIDMESKVISQTLSEASKSGTWRYPKGQQFSQKRGSGNNWAHGFSEHGPKSIDKVLD 126
Query: 455 VVRKEAEGCDCLQGFQLTIL 514
+V++E E CD L GF LT+L
Sbjct: 127 LVQREVEKCDRLDGF-LTLL 145
Score = 31.9 bits (69), Expect = 0.51
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +3
Query: 111 IVHIQAGQCGNQIGAKFWEVISDE 182
IV +Q GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 52.8 bits (121), Expect = 3e-07
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 326 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 466
VR G + +F PD + G+ A NN+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 43.2 bits (97), Expect = 2e-04
Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Frame = +2
Query: 284 RAVMVDLEPGTMDSVR--SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE-----GAELVD 442
R V VD E + S R G GQ R N + G+ G GNN+A G++ G L+
Sbjct: 40 RCVCVDSESKVIASNRRSDGVHGQN-RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLH 98
Query: 443 SVLDVVRKEAEGCDCLQG 496
+D +RKE E CD G
Sbjct: 99 MTMDAMRKEVERCDSFAG 116
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 41.1 bits (92), Expect = 8e-04
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 284 RAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNW 403
RAV++D+E G ++++ GP +F + SG GNNW
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/33 (51%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Frame = +3
Query: 159 FWEVISDEHGIDATGAYSG-DSDLQLERINVYY 254
FWEVI++EHGID G + S +Q +R+NVY+
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYF 33
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQ--LERINVYYTKLQG 269
MRE + + GQ G QIG WE+ EHGI G D + + N ++++ G
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGG 58
Score = 34.7 bits (76), Expect = 0.073
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVR 331
E GGK+VPRAV VDLEP + ++
Sbjct: 55 ETGGGKHVPRAVFVDLEPSVVGRMK 79
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 37.1 bits (82), Expect = 0.014
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 218
MRE + I GQ G QIG WE+ EHGI G D
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSD 234
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 31.1 bits (67), Expect = 0.90
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2
Query: 458 VRKEAEGCDCLQGFQL 505
+RKEAE CD +QGFQL
Sbjct: 1 MRKEAEDCDAIQGFQL 16
>SB_55131| Best HMM Match : fn3 (HMM E-Value=0.0083)
Length = 1266
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/53 (41%), Positives = 24/53 (45%)
Frame = -1
Query: 446 PNQPVQPPLCNVLSPSYSPPQTVRRRSCPVGRFAQTARNGRSPWFQAQGPPSQ 288
P+Q VQ PL L P Y PP V TA R P Q QGPP+Q
Sbjct: 1080 PHQAVQQPLPQQLPPQYRPPAIV------------TAAVARPP--QVQGPPTQ 1118
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = -3
Query: 390 APDCPKTKLSGRKICPNGPERTESMVPGSRSTITAR----GTYLP 268
A DCP ++ +GR +CP P +S + ++++I GT+ P
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKASIEVNDFTLGTHTP 182
>SB_23752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 503 AENPADNRSLLLLF*LHPVPNQPVQPPLCNVLSPSYSPP 387
A P + LL L PVP+ P Q P +P+++PP
Sbjct: 461 ATPPPSSDGALLDLGLDPVPSAPTQAPTPTPAAPTHAPP 499
>SB_34911| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 904
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = -1
Query: 434 VQPPLCNVLSPSYSPPQTVRRRSCPVGRFAQTARNGRS-PWFQAQGPPSQLAGRTCPLKL 258
V PP+C+ L S P S A+ A++G + W + + P +QL +L
Sbjct: 193 VHPPICDCLGCRISSPVVASPESIREAFEAENAKDGNADDWGEVKTPTNQLPESELKSEL 252
Query: 257 -RIVDID 240
R+ D D
Sbjct: 253 GRLQDTD 259
>SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1010
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -3
Query: 381 CPKTKLSGRKICPNGPERTESMVPGSRSTITARGTYLPPEA 259
CP+ + RK P+G + + G+ S + ++G +PP A
Sbjct: 456 CPQGNMDYRKAAPDGRDMQQMGQKGNFSQMLSQGRGMPPGA 496
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,876,317
Number of Sequences: 59808
Number of extensions: 494294
Number of successful extensions: 1476
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1473
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -