Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0424
(698 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 178 2e-45
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 177 6e-45
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 176 1e-44
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 174 4e-44
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 173 7e-44
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 172 2e-43
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 171 4e-43
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 169 2e-42
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 169 2e-42
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 98 4e-21
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 98 4e-21
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 97 7e-21
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 97 7e-21
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 97 7e-21
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 97 7e-21
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 95 3e-20
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 75 5e-14
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 75 6e-14
At4g37190.1 68417.m05265 expressed protein 30 1.3
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 30 1.3
At2g26850.1 68415.m03221 F-box family protein contains Pfam PF00... 29 2.2
At3g24550.1 68416.m03083 protein kinase family protein contains ... 29 3.0
At3g09000.1 68416.m01053 proline-rich family protein 29 3.9
At1g14950.1 68414.m01786 major latex protein-related / MLP-relat... 29 3.9
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 28 6.8
At4g22770.1 68417.m03287 DNA-binding family protein contains a A... 27 9.0
At1g69500.1 68414.m07986 cytochrome P450 family protein similar ... 27 9.0
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 27 9.0
At1g54970.1 68414.m06278 proline-rich family protein similar to ... 27 9.0
At1g53300.1 68414.m06041 thioredoxin family protein contains Pfa... 27 9.0
At1g14930.1 68414.m01784 major latex protein-related / MLP-relat... 27 9.0
At1g11720.1 68414.m01345 starch synthase, putative strong simila... 27 9.0
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 178 bits (434), Expect = 2e-45
Identities = 90/137 (65%), Positives = 99/137 (72%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
EASGGKYVPRAV++DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL
Sbjct: 53 EASGGKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Query: 437 VDSVLDVVRKEAEGCDCLQGFQLTILWEEVLDLVWGLF*FPKSVKSIQIVL*IRFPWYQV 616
+DSVLDVVRKEAE CDCLQGFQ+ G K + + + F +
Sbjct: 113 IDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPS 172
Query: 617 QXFPILWVEPYNATLSV 667
VEPYNATLSV
Sbjct: 173 PKVSDTVVEPYNATLSV 189
Score = 95.9 bits (228), Expect = 2e-20
Identities = 42/56 (75%), Positives = 46/56 (82%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYTKLQG 269
MREI+HIQ GQCGNQIGAKFWEVI EHGID TG GD+DLQLERINVY+ + G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASG 56
Score = 35.5 bits (78), Expect = 0.034
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = +1
Query: 553 ISKIREEYPDRIMNTFXXXXXXXXXDTV 636
ISKIREEYPDR+M TF DTV
Sbjct: 152 ISKIREEYPDRMMMTFSVFPSPKVSDTV 179
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 177 bits (431), Expect = 6e-45
Identities = 88/137 (64%), Positives = 99/137 (72%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
EASGG+YVPRAV++DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL
Sbjct: 54 EASGGRYVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 113
Query: 437 VDSVLDVVRKEAEGCDCLQGFQLTILWEEVLDLVWGLF*FPKSVKSIQIVL*IRFPWYQV 616
+D+VLDVVRKEAE CDCLQGFQ+ G K + + + F +
Sbjct: 114 IDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 173
Query: 617 QXFPILWVEPYNATLSV 667
VEPYNATLSV
Sbjct: 174 PKVSDTVVEPYNATLSV 190
Score = 101 bits (241), Expect = 6e-22
Identities = 45/57 (78%), Positives = 50/57 (87%), Gaps = 1/57 (1%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD-SDLQLERINVYYTKLQG 269
MREI+HIQ GQCGNQIG+KFWEVI DEHGID+TG YSGD +DLQLERINVYY + G
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASG 57
Score = 35.1 bits (77), Expect = 0.045
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = +1
Query: 553 ISKIREEYPDRIMNTFXXXXXXXXXDTV 636
ISKIREEYPDR+M TF DTV
Sbjct: 153 ISKIREEYPDRMMLTFSVFPSPKVSDTV 180
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 176 bits (428), Expect = 1e-44
Identities = 87/137 (63%), Positives = 99/137 (72%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
EASGG+YVPRAV++DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL
Sbjct: 54 EASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 113
Query: 437 VDSVLDVVRKEAEGCDCLQGFQLTILWEEVLDLVWGLF*FPKSVKSIQIVL*IRFPWYQV 616
+D+VLDVVRKEAE CDCLQGFQ+ G K + + + F +
Sbjct: 114 IDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 173
Query: 617 QXFPILWVEPYNATLSV 667
VEPYNATLSV
Sbjct: 174 PKVSDTVVEPYNATLSV 190
Score = 99.5 bits (237), Expect = 2e-21
Identities = 43/57 (75%), Positives = 49/57 (85%), Gaps = 1/57 (1%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS-DLQLERINVYYTKLQG 269
MREI+H+Q GQCGNQIG+KFWEVI DEHG+D TG Y+GDS DLQLERINVYY + G
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASG 57
Score = 35.1 bits (77), Expect = 0.045
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = +1
Query: 553 ISKIREEYPDRIMNTFXXXXXXXXXDTV 636
ISKIREEYPDR+M TF DTV
Sbjct: 153 ISKIREEYPDRMMLTFSVFPSPKVSDTV 180
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 174 bits (424), Expect = 4e-44
Identities = 89/137 (64%), Positives = 98/137 (71%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
EASGGKYVPRAV++DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL
Sbjct: 53 EASGGKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Query: 437 VDSVLDVVRKEAEGCDCLQGFQLTILWEEVLDLVWGLF*FPKSVKSIQIVL*IRFPWYQV 616
+DSVLDVVRKEAE DCLQGFQ+ G K + + + F +
Sbjct: 113 IDSVLDVVRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPS 172
Query: 617 QXFPILWVEPYNATLSV 667
VEPYNATLSV
Sbjct: 173 PKVSDTVVEPYNATLSV 189
Score = 97.9 bits (233), Expect = 6e-21
Identities = 43/56 (76%), Positives = 47/56 (83%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYTKLQG 269
MREI+HIQ GQCGNQIGAKFWEVI DEHGID TG Y GDS LQLERI+VY+ + G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASG 56
Score = 35.5 bits (78), Expect = 0.034
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = +1
Query: 553 ISKIREEYPDRIMNTFXXXXXXXXXDTV 636
ISKIREEYPDR+M TF DTV
Sbjct: 152 ISKIREEYPDRMMMTFSVFPSPKVSDTV 179
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 173 bits (422), Expect = 7e-44
Identities = 88/137 (64%), Positives = 98/137 (71%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
EAS G+YVPRAV++DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL
Sbjct: 53 EASCGRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Query: 437 VDSVLDVVRKEAEGCDCLQGFQLTILWEEVLDLVWGLF*FPKSVKSIQIVL*IRFPWYQV 616
+DSVLDVVRKEAE CDCLQGFQ+ G K + + + F +
Sbjct: 113 IDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPS 172
Query: 617 QXFPILWVEPYNATLSV 667
VEPYNATLSV
Sbjct: 173 PKVSDTVVEPYNATLSV 189
Score = 95.9 bits (228), Expect = 2e-20
Identities = 40/53 (75%), Positives = 47/53 (88%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYTK 260
MREI+HIQ GQCGNQIG+KFWEV++ EHGID TG Y GDS+LQLER+NVYY +
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNE 53
Score = 35.5 bits (78), Expect = 0.034
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = +1
Query: 553 ISKIREEYPDRIMNTFXXXXXXXXXDTV 636
ISKIREEYPDR+M TF DTV
Sbjct: 152 ISKIREEYPDRMMMTFSVFPSPKVSDTV 179
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 172 bits (419), Expect = 2e-43
Identities = 87/137 (63%), Positives = 98/137 (71%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
EAS G++VPRAV++DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL
Sbjct: 53 EASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Query: 437 VDSVLDVVRKEAEGCDCLQGFQLTILWEEVLDLVWGLF*FPKSVKSIQIVL*IRFPWYQV 616
+DSVLDVVRKEAE CDCLQGFQ+ G K + + + F +
Sbjct: 113 IDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 172
Query: 617 QXFPILWVEPYNATLSV 667
VEPYNATLSV
Sbjct: 173 PKVSDTVVEPYNATLSV 189
Score = 97.5 bits (232), Expect = 7e-21
Identities = 40/53 (75%), Positives = 47/53 (88%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYTK 260
MREI+HIQ GQCGNQIGAKFWEV+ EHGID+TG Y G++DLQLER+NVYY +
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNE 53
Score = 35.1 bits (77), Expect = 0.045
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = +1
Query: 553 ISKIREEYPDRIMNTFXXXXXXXXXDTV 636
ISKIREEYPDR+M TF DTV
Sbjct: 152 ISKIREEYPDRMMLTFSVFPSPKVSDTV 179
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 171 bits (416), Expect = 4e-43
Identities = 85/137 (62%), Positives = 98/137 (71%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
EAS G+YVPRA+++DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL
Sbjct: 53 EASCGRYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Query: 437 VDSVLDVVRKEAEGCDCLQGFQLTILWEEVLDLVWGLF*FPKSVKSIQIVL*IRFPWYQV 616
+D+VLDVVRKEAE CDCLQGFQ+ G K + + + F +
Sbjct: 113 IDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 172
Query: 617 QXFPILWVEPYNATLSV 667
VEPYNATLSV
Sbjct: 173 PKVSDTVVEPYNATLSV 189
Score = 99.1 bits (236), Expect = 2e-21
Identities = 47/75 (62%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYTKLQ-GAST 278
MREI+HIQ GQCGNQIG+KFWEV+ DEHGID TG Y G+SDLQLER+NVYY + G
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 279 SREL*WWTLSLEPWT 323
R + + LEP T
Sbjct: 61 PRAI---LMDLEPGT 72
Score = 35.1 bits (77), Expect = 0.045
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = +1
Query: 553 ISKIREEYPDRIMNTFXXXXXXXXXDTV 636
ISKIREEYPDR+M TF DTV
Sbjct: 152 ISKIREEYPDRMMLTFSVFPSPKVSDTV 179
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 169 bits (411), Expect = 2e-42
Identities = 85/137 (62%), Positives = 97/137 (70%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
EAS G++VPRAV++DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL
Sbjct: 53 EASCGRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Query: 437 VDSVLDVVRKEAEGCDCLQGFQLTILWEEVLDLVWGLF*FPKSVKSIQIVL*IRFPWYQV 616
+DSVLDVVRKEAE CDCLQGFQ+ G K + + + F +
Sbjct: 113 IDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 172
Query: 617 QXFPILWVEPYNATLSV 667
VEPYNATLSV
Sbjct: 173 PKVSDTVVEPYNATLSV 189
Score = 100 bits (239), Expect = 1e-21
Identities = 43/53 (81%), Positives = 47/53 (88%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYTK 260
MREI+HIQ GQCGNQIGAKFWEV+ EHGID TG Y+GDSDLQLERINVYY +
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNE 53
Score = 35.1 bits (77), Expect = 0.045
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = +1
Query: 553 ISKIREEYPDRIMNTFXXXXXXXXXDTV 636
ISKIREEYPDR+M TF DTV
Sbjct: 152 ISKIREEYPDRMMLTFSVFPSPKVSDTV 179
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 169 bits (411), Expect = 2e-42
Identities = 85/137 (62%), Positives = 97/137 (70%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
EAS G++VPRAV++DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL
Sbjct: 53 EASCGRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Query: 437 VDSVLDVVRKEAEGCDCLQGFQLTILWEEVLDLVWGLF*FPKSVKSIQIVL*IRFPWYQV 616
+DSVLDVVRKEAE CDCLQGFQ+ G K + + + F +
Sbjct: 113 IDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 172
Query: 617 QXFPILWVEPYNATLSV 667
VEPYNATLSV
Sbjct: 173 PKVSDTVVEPYNATLSV 189
Score = 100 bits (239), Expect = 1e-21
Identities = 43/53 (81%), Positives = 47/53 (88%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYTK 260
MREI+HIQ GQCGNQIGAKFWEV+ EHGID TG Y+GDSDLQLERINVYY +
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNE 53
Score = 35.1 bits (77), Expect = 0.045
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = +1
Query: 553 ISKIREEYPDRIMNTFXXXXXXXXXDTV 636
ISKIREEYPDR+M TF DTV
Sbjct: 152 ISKIREEYPDRMMLTFSVFPSPKVSDTV 179
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 98.3 bits (234), Expect = 4e-21
Identities = 44/81 (54%), Positives = 56/81 (69%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 55 ETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEI 114
Query: 437 VDSVLDVVRKEAEGCDCLQGF 499
VD LD VRK A+ C LQGF
Sbjct: 115 VDLCLDRVRKLADNCTGLQGF 135
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYTK 260
MREI+ I GQ G Q+G WE+ EHGI G D+ + + + N ++++
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSE 55
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 98.3 bits (234), Expect = 4e-21
Identities = 44/81 (54%), Positives = 56/81 (69%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 55 ETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEI 114
Query: 437 VDSVLDVVRKEAEGCDCLQGF 499
VD LD VRK A+ C LQGF
Sbjct: 115 VDLCLDRVRKLADNCTGLQGF 135
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYTK 260
MREI+ I GQ G Q+G WE+ EHGI G D+ + + + N ++++
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSE 55
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 97.5 bits (232), Expect = 7e-21
Identities = 43/81 (53%), Positives = 56/81 (69%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 55 ETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEI 114
Query: 437 VDSVLDVVRKEAEGCDCLQGF 499
VD LD +RK A+ C LQGF
Sbjct: 115 VDLCLDRIRKLADNCTGLQGF 135
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 218
MRE + I GQ G Q+G WE+ EHGI G GD
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGD 39
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 97.5 bits (232), Expect = 7e-21
Identities = 43/81 (53%), Positives = 56/81 (69%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 55 ETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEI 114
Query: 437 VDSVLDVVRKEAEGCDCLQGF 499
VD LD +RK A+ C LQGF
Sbjct: 115 VDLCLDRIRKLADNCTGLQGF 135
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 218
MRE + I GQ G Q+G WE+ EHGI G GD
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGD 39
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 97.5 bits (232), Expect = 7e-21
Identities = 43/81 (53%), Positives = 56/81 (69%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 55 ETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEI 114
Query: 437 VDSVLDVVRKEAEGCDCLQGF 499
VD LD +RK A+ C LQGF
Sbjct: 115 VDLCLDRIRKLADNCTGLQGF 135
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 218
MRE + I GQ G Q+G WE+ EHGI G D
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSD 39
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 97.5 bits (232), Expect = 7e-21
Identities = 43/81 (53%), Positives = 56/81 (69%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 55 ETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEI 114
Query: 437 VDSVLDVVRKEAEGCDCLQGF 499
VD LD +RK A+ C LQGF
Sbjct: 115 VDLCLDRIRKLADNCTGLQGF 135
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 218
MRE + I GQ G Q+G WE+ EHGI G D
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSD 39
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 95.5 bits (227), Expect = 3e-20
Identities = 41/81 (50%), Positives = 58/81 (71%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E S G++VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 55 ETSSGQHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREI 114
Query: 437 VDSVLDVVRKEAEGCDCLQGF 499
VD+ L+ +RK A+ C LQGF
Sbjct: 115 VDTCLERLRKLADNCTGLQGF 135
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS 221
MREI+ I GQ G Q+G WE+ EHGI G DS
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDS 40
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 74.9 bits (176), Expect = 5e-14
Identities = 31/86 (36%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Frame = +2
Query: 254 YEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEG 427
Y+A Y+PRA+++DLEP ++ +++G + ++ +N GAGNNWA G Y +G
Sbjct: 53 YQADDQHYIPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQG 111
Query: 428 AELVDSVLDVVRKEAEGCDCLQGFQL 505
+ + ++D++ +EA+G D L+GF L
Sbjct: 112 KGVEEEIMDMIDREADGSDSLEGFVL 137
Score = 48.4 bits (110), Expect = 5e-06
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = +3
Query: 105 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYY 254
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFF 52
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 74.5 bits (175), Expect = 6e-14
Identities = 31/86 (36%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Frame = +2
Query: 254 YEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEG 427
Y+A Y+PRA+++DLEP ++ +++G + ++ +N GAGNNWA G Y +G
Sbjct: 53 YQADDQHYIPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQG 111
Query: 428 AELVDSVLDVVRKEAEGCDCLQGFQL 505
+ + ++D++ +EA+G D L+GF L
Sbjct: 112 KGVEEEIMDMIDREADGSDSLEGFVL 137
Score = 48.4 bits (110), Expect = 5e-06
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = +3
Query: 105 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYY 254
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFF 52
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFW 164
MREIV IQ G+ N +G+ FW
Sbjct: 1 MREIVTIQVGEFANFVGSHFW 21
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +2
Query: 434 LVDSVLDVVRKEAEGCDCLQGF 499
+++SV VVRKEAE C+CLQ F
Sbjct: 1 MINSV-GVVRKEAENCNCLQVF 21
>At2g26850.1 68415.m03221 F-box family protein contains Pfam
PF00646: F-box domain; similar to SKP1 interacting
partner 2 (SKIP2) TIGR_Ath1:At5g67250
Length = 371
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 164 PELCSDLIPALTRLDVDDFPHDCTKNLEPP 75
P+L S ++ ++ LD+ D P DC L PP
Sbjct: 50 PDLASPVLGKMSILDLPDLPLDCILELLPP 79
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 29.1 bits (62), Expect = 3.0
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Frame = -1
Query: 452 PVPNQPVQPPLCNVLSP-SYSPPQTVRRRSCPVGRFAQ---TARNGRSPWFQAQGPPSQL 285
P P+ P+ P L P S +PP S P+ T N RSP QGPP+
Sbjct: 54 PPPSSPLPPSLPPPSPPGSLTPPLPQPSPSAPITPSPPSPTTPSNPRSPPSPNQGPPNTP 113
Query: 284 AGRT 273
+G T
Sbjct: 114 SGST 117
>At3g09000.1 68416.m01053 proline-rich family protein
Length = 541
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/60 (35%), Positives = 26/60 (43%)
Frame = +1
Query: 109 KSSTSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCSLNASMSTIRSFRGQVRPAS 288
K TS AG+R SSG TS TP + TPT S + ++T S P S
Sbjct: 133 KPQTSSSSVAGLRRPSSSGSSRSTSRPATP-TRRSTTPTTSTSRPVTTRASNSRSSTPTS 191
>At1g14950.1 68414.m01786 major latex protein-related / MLP-related
low similarity to major latex protein {Papaver
somniferum}[GI:294060] ; contains Pfam profile PF00407:
Pathogenesis-related protein Bet v I family
Length = 155
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 410 GHYTEGAELVDSVLDVVRKEAEGCDCLQGFQLTILWEE 523
GH E ++ D + V K EGC C ++T+ WE+
Sbjct: 89 GHVMEQLKVYDVIFQFVPKSQEGCVC----KVTMFWEK 122
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 108 EIVHIQAGQCGNQIGAKFWEVISD 179
+I++ A + G+ GA FWEVIS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
>At4g22770.1 68417.m03287 DNA-binding family protein contains a AT
hook motif (DNA binding motifs with a preference for A/T
rich regions), Pfam:PF02178
Length = 334
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 181 STALTPRVLTAATPTCSLNASMSTIRSFRGQVRPAS 288
+ L+P +++A PT S ST RG+++PA+
Sbjct: 87 AVTLSPNPISSAAPTTSHVIDFSTTSEKRGKMKPAT 122
>At1g69500.1 68414.m07986 cytochrome P450 family protein similar to
Cytochrome P450 86A2 (SP:O23066) [Arabidopsis
thaliana]contains Pfam profile: PF00067: Cytochrome P450
Length = 478
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 455 HPVPNQPVQPPLCNVLSPSYSPPQTVRRRS 366
H VPN PV+ + +LS ++ TV RRS
Sbjct: 449 HLVPNHPVKYRMMTILSMAHGLKVTVSRRS 478
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta repeat;
similar to Coatomer alpha subunit (Alpha-coat protein)
(Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621) [Homo sapiens]
Length = 1216
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 546 SFDFQNP*RVSRSYYEYVFRGTKSKXFRYC 635
++DF+NP V S Y ++RG K YC
Sbjct: 1151 NYDFRNPFVVCGSTYVPIYRGQKDVSCPYC 1180
>At1g54970.1 68414.m06278 proline-rich family protein similar to
proline-rich protein GI:170048 from [Glycine max]
Length = 335
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -1
Query: 452 PVPNQPVQPPLCNVLSPSYSPP 387
PV +P PP SPSYSPP
Sbjct: 169 PVYTKPTLPPPVYKKSPSYSPP 190
>At1g53300.1 68414.m06041 thioredoxin family protein contains Pfam
profiles PF00085: Thioredoxin, PF00515: TPR Domain;
similar to tetratricopeptide repeat protein 2
(GI:7248701) [Drosophila melanogaster]; similar to DnaJ
homolog subfamily C member 7 (Tetratricopeptide repeat
protein 2) (TPR repeat protein 2) (Swiss-Prot:Q99615)
[Homo sapiens]
Length = 699
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -3
Query: 393 PAPDCPKTKLSGRKICPNGPERTESMVPG-SRSTITARGT 277
PAP P L ICP+G + M SRS + GT
Sbjct: 129 PAPTSPANVLPTGNICPSGKIQITGMTQSRSRSDVLGSGT 168
>At1g14930.1 68414.m01784 major latex protein-related / MLP-related
low similarity to major latex protein {Papaver
somniferum}[GI:20810] ; contains Pfam profile PF00407:
Pathogenesis-related protein Bet v I family
Length = 155
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 407 KGHYTEGAELVDSVLDVVRKEAEGCDCLQGFQLTILWE 520
+GH E + + +L + K EGC C ++T++WE
Sbjct: 88 EGHVMEKYKKYEVILQFIPKSNEGCVC----KVTLIWE 121
>At1g11720.1 68414.m01345 starch synthase, putative strong
similarity to soluble-starch-synthase [Solanum
tuberosum] GI:1911166
Length = 1025
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -1
Query: 674 LVELIALRYMALPTVSETFGLGTT 603
L +LIA+RY A+P V +T GL T
Sbjct: 923 LTQLIAMRYGAVPVVRKTGGLFDT 946
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,183,676
Number of Sequences: 28952
Number of extensions: 360945
Number of successful extensions: 1200
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1183
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -