Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0423
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    62   4e-12
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    31   0.011
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   2.2  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   5.0  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    22   5.0  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           22   5.0  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   8.7  

>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 62.1 bits (144), Expect = 4e-12
 Identities = 28/79 (35%), Positives = 54/79 (68%)
 Frame = +3

Query: 9   DISKNIVEYLKGHQLEDVDVDDLMRRYTXDVIASAGFGLQVNSLVDKDNEFYECGQAMFS 188
           + ++N V++ +G + +DV++ ++  R++ DVIA+A FG++VNS+ + +NEFY  G+++ +
Sbjct: 109 ECAENFVDFFQGRE-QDVEIKEVFSRFSNDVIATAAFGIRVNSVQEPNNEFYAMGRSLTT 167

Query: 189 TSWPQRFKMILAAQFPTLA 245
            S  Q  K+ LA   P +A
Sbjct: 168 FSAFQILKIFLAHLVPKIA 186



 Score = 56.8 bits (131), Expect = 1e-10
 Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
 Frame = +2

Query: 230 VSNVSQENRIKVFPQKVTRFFREIVTSTMDYRLKNNVERPDMIQLLMDAYKGTLKNESNE 409
           V  +++    +V P+KVT FF  ++   M  R    + RPD+I LLM+A KG LK+++  
Sbjct: 182 VPKIAEFFEYRVLPRKVTDFFEGLILDNMQKREAEKIVRPDLIHLLMEARKGKLKHDN-- 239

Query: 410 SDEKNVGFAMTEEMLKPKGNVR-KWTQDELTAQ 505
           S+E   GFA  EE    K   + + T +++ AQ
Sbjct: 240 SNEGGEGFATVEESEIGKNTKQVELTDEKIVAQ 272



 Score = 35.9 bits (79), Expect = 3e-04
 Identities = 14/33 (42%), Positives = 22/33 (66%)
 Frame = +1

Query: 505 SFIFFLAGFESSANGLTLCIHELALNPEAQGKI 603
           + +FF AGFE+ + G++   +ELA NP  Q K+
Sbjct: 273 ALLFFFAGFETVSTGVSFMAYELATNPHVQKKL 305


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 30.7 bits (66), Expect = 0.011
 Identities = 12/42 (28%), Positives = 26/42 (61%)
 Frame = +3

Query: 33  YLKGHQLEDVDVDDLMRRYTXDVIASAGFGLQVNSLVDKDNE 158
           +L+ H  E++DV   M++Y+ D+I++  FG+      + ++E
Sbjct: 156 FLEDHT-EEIDVKTAMKKYSVDIISTCAFGINTYCFRNDNSE 196


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/42 (26%), Positives = 18/42 (42%)
 Frame = -2

Query: 287 NELLFVEILLFYFLG*RWKLCSQYHFKSLWPTCAKHCLTTLV 162
           N+L   ++LL       W +   YH   LW   + +C   L+
Sbjct: 229 NKLYGHQLLLTILTYLIWTIYEMYHLAILWSCTSTNCPRFLI 270


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 245 QENRIKVFPQKVTRFFREIVTSTMDY 322
           Q  R+K   +K T+F  + VTST D+
Sbjct: 232 QNRRMKA--KKDTKFTEQSVTSTFDF 255


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 245 QENRIKVFPQKVTRFFREIVTSTMDY 322
           Q  R+K   +K T+F  + VTST D+
Sbjct: 232 QNRRMKA--KKDTKFTEQSVTSTFDF 255


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 245 QENRIKVFPQKVTRFFREIVTSTMDY 322
           Q  R+K   +K T+F  + VTST D+
Sbjct: 232 QNRRMKA--KKDTKFTEQSVTSTFDF 255


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -2

Query: 287 NELLFVEILLF 255
           NEL+F E+LLF
Sbjct: 144 NELVFSEVLLF 154


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,812
Number of Sequences: 336
Number of extensions: 2686
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)