Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0423
         (648 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g67110.1 68414.m07635 cytochrome P450, putative similar to Cy...    33   0.16 
At4g26700.1 68417.m03848 fimbrin-like protein (FIM1) identical t...    31   0.50 
At5g55400.1 68418.m06902 fimbrin-like protein, putative similar ...    30   1.5  
At5g24910.1 68418.m02949 cytochrome P450 family protein similar ...    29   2.7  
At5g24900.1 68418.m02948 cytochrome P450 family protein similar ...    29   3.5  
At4g30780.1 68417.m04361 expressed protein hypothetical protein ...    29   3.5  
At5g60210.1 68418.m07547 cytoplasmic linker protein-related cont...    28   4.7  
At1g75380.3 68414.m08757 wound-responsive protein-related simila...    27   8.1  
At1g75380.2 68414.m08756 wound-responsive protein-related simila...    27   8.1  
At1g75380.1 68414.m08755 wound-responsive protein-related simila...    27   8.1  

>At1g67110.1 68414.m07635 cytochrome P450, putative similar to
           Cytochrome P450 72A1 (SP:Q05047) [Catharanthus roseus];
          Length = 512

 Score = 33.1 bits (72), Expect = 0.16
 Identities = 18/54 (33%), Positives = 30/54 (55%)
 Frame = +3

Query: 3   MIDISKNIVEYLKGHQLEDVDVDDLMRRYTXDVIASAGFGLQVNSLVDKDNEFY 164
           M++ +K + E L+    E+V++ + MRR T D+I+   FG    S  DK  E +
Sbjct: 176 MVECTKMMAERLRKEVGEEVEIGEEMRRLTADIISRTEFG----SSCDKGKELF 225


>At4g26700.1 68417.m03848 fimbrin-like protein (FIM1) identical to
           fimbrin-like protein (ATFIM1) [Arabidopsis thaliana]
           GI:2905893
          Length = 687

 Score = 31.5 bits (68), Expect = 0.50
 Identities = 18/74 (24%), Positives = 34/74 (45%)
 Frame = +2

Query: 155 RILRVWSSNV*HKLATEI*NDIGCTVSNVSQENRIKVFPQKVTRFFREIVTSTMDYRLKN 334
           R+L  W  N  H L       +GC+V N+  ++  +  P  V     +++   +   L N
Sbjct: 187 RVLNPWERNENHTLCLNSAKAVGCSVVNIGTQDLAEGRPHLVLGLISQLIKIQVLADL-N 245

Query: 335 NVERPDMIQLLMDA 376
             + P +++LL D+
Sbjct: 246 LKKTPQLVELLEDS 259


>At5g55400.1 68418.m06902 fimbrin-like protein, putative similar to
           fimbrin-like protein (ATFIM1) [Arabidopsis thaliana]
           GI:2905893; contains Pfam profile PF00307: Calponin
           homology (CH) domain
          Length = 714

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
 Frame = +2

Query: 155 RILRVWSSNV*HKLATEI*NDIGCTVSNVSQENRIKVFPQKVTRFFREIVTSTM--DYRL 328
           R+L  W  N  H L       +GC+V N+  ++  +  P  V     +++   +  D  L
Sbjct: 188 RVLNPWERNENHTLCLNSAKAVGCSVVNIGTQDLAEGRPHLVLGLISQLIKIQLLADLSL 247

Query: 329 KNNVERPDMIQLLMD 373
           K   + P +++L+ D
Sbjct: 248 K---KMPQLVELVED 259


>At5g24910.1 68418.m02949 cytochrome P450 family protein similar to
           Cytochrome P450 72A1 (SP:Q05047) [Catharanthus roseus];
           similar to fatty acid omega-hydroxylase cytochrome P450
           4A11 - Homo sapiens, PIR:I53015; supported by cDNA:
           gi_16604323_gb_AY058060.1_
          Length = 532

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = +1

Query: 496 DRTSFIFFLAGFESSANGLTLCIHELALNPEAQGKI 603
           D    I+F AG E+SA  ++ C+  LALNP  Q +I
Sbjct: 334 DNCKSIYF-AGHETSAVAVSWCLMLLALNPSWQTRI 368


>At5g24900.1 68418.m02948 cytochrome P450 family protein similar to
           Cytochrome P450 72A1 (SP:Q05047) [Catharanthus roseus];
           fatty acid omega-hydroxylase cytochrome P450 4A11 - Homo
           sapiens, PIR:I53015
          Length = 525

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = +1

Query: 496 DRTSFIFFLAGFESSANGLTLCIHELALNPEAQGKI 603
           D    I+F AG +S+A  ++ C+  LALNP  Q KI
Sbjct: 329 DNCKSIYF-AGHDSTAVSVSWCLMLLALNPSWQVKI 363


>At4g30780.1 68417.m04361 expressed protein hypothetical protein
           F27D4.1 -  Arabidopsis thaliana,PID:g4115371
          Length = 589

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -2

Query: 431 NLHFFRLIRCSHS*ESLYKHPSVAESYPVFLRCSSIY 321
           N HF +L++C H    L + P +A   P F    SI+
Sbjct: 258 NKHFEKLVQCDHRLFHLSRQPEIAIDSPYFDARQSIF 294


>At5g60210.1 68418.m07547 cytoplasmic linker protein-related
           contains weak similarity to cytoplasmic linker protein
           CLIP-170 (GI:2905649) [Gallus gallus]
          Length = 588

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 16/91 (17%)
 Frame = +2

Query: 323 RLKNNVERPDMIQLLMDAYKGTLKNESNESDEKNVGFAMTEEMLK----------PKGNV 472
           +L+NN    +  ++L+  Y+   + ESNE DE+        E L+           +GNV
Sbjct: 312 KLQNNPADLENHEILLKDYESLRRGESNEMDEEVSSLRCEVERLRAALEASDKKDQEGNV 371

Query: 473 ----RKWTQDELTAQ--VSSSSLRDLKARLM 547
               R   Q EL ++  ++ S + +LKARLM
Sbjct: 372 EASSRLRIQAELQSELKIAKSEIDELKARLM 402


>At1g75380.3 68414.m08757 wound-responsive protein-related similar
           to wound inducive gene GI:8096273 from [Nicotiana
           tabacum]
          Length = 325

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = -3

Query: 346 SFYVVLQSIIHSAGHD--LSKETSYFLWKYFYSIFLANVGNCAANIILNLCGQLVLNIA 176
           + Y V++ ++   G++  L + T      YF  +FL+ VGN +  +  +L     +NIA
Sbjct: 173 TMYQVVKEMVDKMGYEVRLVRVTKRVHEAYFAQLFLSKVGNASECVSFDLRPSDAINIA 231


>At1g75380.2 68414.m08756 wound-responsive protein-related similar
           to wound inducive gene GI:8096273 from [Nicotiana
           tabacum]
          Length = 325

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = -3

Query: 346 SFYVVLQSIIHSAGHD--LSKETSYFLWKYFYSIFLANVGNCAANIILNLCGQLVLNIA 176
           + Y V++ ++   G++  L + T      YF  +FL+ VGN +  +  +L     +NIA
Sbjct: 173 TMYQVVKEMVDKMGYEVRLVRVTKRVHEAYFAQLFLSKVGNASECVSFDLRPSDAINIA 231


>At1g75380.1 68414.m08755 wound-responsive protein-related similar
           to wound inducive gene GI:8096273 from [Nicotiana
           tabacum]
          Length = 325

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = -3

Query: 346 SFYVVLQSIIHSAGHD--LSKETSYFLWKYFYSIFLANVGNCAANIILNLCGQLVLNIA 176
           + Y V++ ++   G++  L + T      YF  +FL+ VGN +  +  +L     +NIA
Sbjct: 173 TMYQVVKEMVDKMGYEVRLVRVTKRVHEAYFAQLFLSKVGNASECVSFDLRPSDAINIA 231


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,664,659
Number of Sequences: 28952
Number of extensions: 241934
Number of successful extensions: 712
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1344285648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)