Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0422
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   5.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   5.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.0  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   6.6  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   6.6  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   8.7  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   8.7  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   8.7  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   8.7  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   8.7  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   8.7  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   8.7  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    21   8.7  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   8.7  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   8.7  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 455 KRNLKRQRCEKKID 496
           K+N+ R  C KKID
Sbjct: 91  KKNVTRAYCNKKID 104



 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 470 SLDFFFKNFSTA 435
           S+DF F NFS A
Sbjct: 314 SVDFLFDNFSAA 325


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 455 KRNLKRQRCEKKID 496
           K+N+ R  C KKID
Sbjct: 91  KKNVTRAYCNKKID 104



 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 470 SLDFFFKNFSTA 435
           S+DF F NFS A
Sbjct: 314 SVDFLFDNFSAA 325


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/32 (31%), Positives = 13/32 (40%)
 Frame = +3

Query: 471 GKDAKKR*TDWQPSYLNYTRRQGSTLSKSECC 566
           G  A  R + WQ  +LN    Q   + K   C
Sbjct: 352 GNSASNRHSAWQSHWLNKGAEQAKNVLKCVWC 383


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 114 YLWCKILKSAEYLGP 158
           +L CK++K  + LGP
Sbjct: 110 FLLCKVVKYGQTLGP 124


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 645 VPRKRSIQFYNISHFFFFSL 586
           +P  RSI    + H FFF L
Sbjct: 368 LPALRSIGLKCLEHLFFFKL 387


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 64  SFFFQNIFSDIFYVT 20
           SFFF   F DIF +T
Sbjct: 218 SFFFMPSFVDIFRLT 232


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 470 SLDFFFKNFSTA 435
           S+DF F NFS A
Sbjct: 81  SVDFLFDNFSAA 92


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 334 RTPFEVVFFKHFSGFWHEGGV 272
           R P+E   F   SG  H GG+
Sbjct: 159 RHPYESWPFNTMSGATHHGGI 179


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -1

Query: 591 SLPRVLFQDSIHFSTKYSLVV*YN*DKKAASQ 496
           ++P    + S+HF  +Y +   Y  D+K   Q
Sbjct: 272 TIPPFASRGSMHFPNQYQMNQEYRTDRKHTQQ 303


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 190 LLNAAIMSPIAHPPCTPSASCTP 258
           L+NA  +SP + P  +PS    P
Sbjct: 190 LVNAPSVSPASLPSISPSGGFLP 212


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -1

Query: 591 SLPRVLFQDSIHFSTKYSLVV*YN*DKKAASQ 496
           ++P    + S+HF  +Y +   Y  D+K   Q
Sbjct: 220 TIPPFASRGSMHFPNQYQMNQEYRTDRKHTQQ 251


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -1

Query: 591 SLPRVLFQDSIHFSTKYSLVV*YN*DKKAASQ 496
           ++P    + S+HF  +Y +   Y  D+K   Q
Sbjct: 403 TIPPFASRGSMHFPNQYQMNQEYRTDRKHTQQ 434


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -2

Query: 497 SLSFFRIFASLDFFFKNFST 438
           SLS  ++  +LDF+F+ F T
Sbjct: 78  SLSEVKMDFTLDFYFRQFWT 97


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +1

Query: 178 HEQVLLNAAIMSPIAHPPCTPSAS 249
           H+Q+  +A   +P A+   +PS S
Sbjct: 20  HQQLFQSATTEAPAAYSSSSPSGS 43


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +1

Query: 178 HEQVLLNAAIMSPIAHPPCTPSAS 249
           H+Q+  +A   +P A+   +PS S
Sbjct: 20  HQQLFQSATTEAPAAYSSSSPSGS 43


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,139
Number of Sequences: 336
Number of extensions: 3177
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)