Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0419
(319 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 141 1e-34
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 136 4e-33
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 136 4e-33
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 132 4e-32
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 2e-09
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 55 1e-08
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 54 3e-08
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 54 3e-08
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 3e-08
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 54 3e-08
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 53 4e-08
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 8e-08
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 1e-07
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 5e-06
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 2e-05
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 32 0.088
SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.5
SB_53041| Best HMM Match : E1-E2_ATPase (HMM E-Value=5.7e-20) 27 4.4
SB_9321| Best HMM Match : DDE (HMM E-Value=5.40004e-41) 26 5.8
SB_38407| Best HMM Match : DDE (HMM E-Value=5.40004e-41) 26 5.8
SB_2507| Best HMM Match : DUF1168 (HMM E-Value=1.6) 26 7.6
SB_346| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.6
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 141 bits (342), Expect = 1e-34
Identities = 63/72 (87%), Positives = 66/72 (91%)
Frame = +3
Query: 39 IYSSHK*NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYY 218
+YSS KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYY
Sbjct: 205 VYSSKLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYY 264
Query: 219 NEASGGKYVPRA 254
NEA+GGKYVPRA
Sbjct: 265 NEATGGKYVPRA 276
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 136 bits (329), Expect = 4e-33
Identities = 59/63 (93%), Positives = 61/63 (96%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 245
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 246 PRA 254
PRA
Sbjct: 61 PRA 63
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 136 bits (329), Expect = 4e-33
Identities = 59/63 (93%), Positives = 61/63 (96%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 245
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 246 PRA 254
PRA
Sbjct: 61 PRA 63
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 132 bits (320), Expect = 4e-32
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 245
MREIV +QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 246 PRA 254
PR+
Sbjct: 61 PRS 63
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 58.0 bits (134), Expect = 2e-09
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNEASGGK 239
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 240 YVPRA 254
+VPRA
Sbjct: 61 HVPRA 65
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 55.2 bits (127), Expect = 1e-08
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 239
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 240 YVPRA 254
+VPRA
Sbjct: 61 HVPRA 65
Score = 53.2 bits (122), Expect = 4e-08
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 242
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 243 VPRA 254
VPRA
Sbjct: 495 VPRA 498
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 54.0 bits (124), Expect = 3e-08
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 239
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 240 YVPRA 254
+VPRA
Sbjct: 61 HVPRA 65
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 53.6 bits (123), Expect = 3e-08
Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 239
MRE + I GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 240 YVPRA 254
+VPRA
Sbjct: 61 HVPRA 65
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 53.6 bits (123), Expect = 3e-08
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 239
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 240 YVPRA 254
+VPRA
Sbjct: 61 HVPRA 65
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 53.6 bits (123), Expect = 3e-08
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 239
+RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 240 YVPRA 254
+VPRA
Sbjct: 646 HVPRA 650
Score = 53.2 bits (122), Expect = 4e-08
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 242
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 243 VPRA 254
VPRA
Sbjct: 574 VPRA 577
Score = 52.8 bits (121), Expect = 6e-08
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 242
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 125
Query: 243 VPRA 254
VPRA
Sbjct: 126 VPRA 129
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 53.2 bits (122), Expect = 4e-08
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 242
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 243 VPRA 254
VPRA
Sbjct: 61 VPRA 64
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 52.4 bits (120), Expect = 8e-08
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 242
RE V I GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 243 VPRA 254
VPRA
Sbjct: 480 VPRA 483
Score = 38.3 bits (85), Expect = 0.001
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +3
Query: 111 IGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKYVPRA 254
+G WE+ EHGI P G D + + N +++E GK+VPRA
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRA 50
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 52.0 bits (119), Expect = 1e-07
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 242
RE + I GQ G QIG WE+ EHGI P G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 243 VPRA 254
VPRA
Sbjct: 433 VPRA 436
Score = 52.0 bits (119), Expect = 1e-07
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 242
RE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 243 VPRASSSTWSP 275
VPRA + P
Sbjct: 866 VPRAVFADLEP 876
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 46.4 bits (105), Expect = 5e-06
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER----INVYYNEASG 233
MRE + I GQ G QIG WE+ EHGI P G H SD +R + +++E +
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFSETAS 253
Query: 234 GKYVPRAS 257
GK+ + +
Sbjct: 254 GKHADQCT 261
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 2e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +3
Query: 123 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 224
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 32.3 bits (70), Expect = 0.088
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +3
Query: 75 IVHIQAGQCGNQIGAKFWEIISDE 146
IV +Q GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.5 bits (58), Expect = 2.5
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 221 IVVYIDALQLQVRVPM-VGTGGVDAVLVGDDLPEL 120
I VY DA++LQV P+ G+D + V D EL
Sbjct: 48 ITVYADAVELQVTYPLRAPLRGIDLITVYADAVEL 82
>SB_53041| Best HMM Match : E1-E2_ATPase (HMM E-Value=5.7e-20)
Length = 704
Score = 26.6 bits (56), Expect = 4.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +3
Query: 204 INVYYNEASGGKYVPRASSSTW 269
+ YY E GKY+P + + W
Sbjct: 95 LGYYYREVCKGKYIPDSEKNAW 116
>SB_9321| Best HMM Match : DDE (HMM E-Value=5.40004e-41)
Length = 700
Score = 26.2 bits (55), Expect = 5.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 166 PVGSMPCSSEMISQNLAPIWLPH*PAWICT 77
P + PC +++ S+ L IW + AWI T
Sbjct: 273 PTANPPCFAKLDSECLPVIWRANRRAWITT 302
>SB_38407| Best HMM Match : DDE (HMM E-Value=5.40004e-41)
Length = 700
Score = 26.2 bits (55), Expect = 5.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 166 PVGSMPCSSEMISQNLAPIWLPH*PAWICT 77
P + PC +++ S+ L IW + AWI T
Sbjct: 273 PTANPPCFAKLDSECLPVIWRANRRAWITT 302
>SB_2507| Best HMM Match : DUF1168 (HMM E-Value=1.6)
Length = 305
Score = 25.8 bits (54), Expect = 7.6
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +3
Query: 144 EHGIDPTGAYHGDSDLQLERIN 209
+H +D T AYH D+D +++ N
Sbjct: 142 KHVVDTTQAYHQDNDKEIDEEN 163
>SB_346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 652
Score = 25.8 bits (54), Expect = 7.6
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +3
Query: 144 EHGIDPTGAYHGDSDLQLERIN 209
+H +D T AYH D+D +++ N
Sbjct: 102 KHVVDTTQAYHQDNDKEIDEEN 123
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,662,078
Number of Sequences: 59808
Number of extensions: 180087
Number of successful extensions: 510
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 495
length of database: 16,821,457
effective HSP length: 72
effective length of database: 12,515,281
effective search space used: 413004273
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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