Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0418
         (309 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2DQC7 Cluster: Putative uncharacterized protein; n=1; ...    37   0.076
UniRef50_Q22XX2 Cluster: Putative uncharacterized protein; n=1; ...    32   2.2  
UniRef50_Q7RE88 Cluster: Homeobox-containing protein; n=2; Plasm...    31   5.0  
UniRef50_A6LJV2 Cluster: Putative uncharacterized protein; n=1; ...    30   8.8  

>UniRef50_A2DQC7 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 600

 Score = 37.1 bits (82), Expect = 0.076
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +1

Query: 109 KINAYFLRILQVFNNNNYTCYPIDFNIAYFY 201
           KIN +  R++Q FNN  YT Y +D++   FY
Sbjct: 549 KINTFVGRVIQTFNNEIYTIYEVDYDKGLFY 579


>UniRef50_Q22XX2 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 575

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = +1

Query: 37  IYXLFITENSFFDEKIVC*IKQTTKINAYFLRILQVFNNNNYTCYPIDFNI 189
           I  L   +++F   + +  I+QT K N +  + L   N     CYPIDF++
Sbjct: 262 IIDLIANKSNFCSNEFISEIEQTLKENKFIFQNLSFDNIYLQGCYPIDFSL 312


>UniRef50_Q7RE88 Cluster: Homeobox-containing protein; n=2;
           Plasmodium (Vinckeia)|Rep: Homeobox-containing protein -
           Plasmodium yoelii yoelii
          Length = 774

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = +3

Query: 204 PNINRLISIAMVYDYFDNIVSCVKCM 281
           PNI + +  A ++ Y +N++SC+KCM
Sbjct: 354 PNILKSLYDAKIFKYPNNLISCLKCM 379


>UniRef50_A6LJV2 Cluster: Putative uncharacterized protein; n=1;
           Thermosipho melanesiensis BI429|Rep: Putative
           uncharacterized protein - Thermosipho melanesiensis
           BI429
          Length = 209

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 18/41 (43%), Positives = 20/41 (48%)
 Frame = +1

Query: 37  IYXLFITENSFFDEKIVC*IKQTTKINAYFLRILQVFNNNN 159
           I   FI  NSFF  K +  I  +   NAYFL I   F  NN
Sbjct: 104 IVTTFIPPNSFFFPKKLSVILISAVFNAYFLGIYSFFLKNN 144


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 249,609,538
Number of Sequences: 1657284
Number of extensions: 4081391
Number of successful extensions: 8308
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8304
length of database: 575,637,011
effective HSP length: 79
effective length of database: 444,711,575
effective search space used: 10228366225
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)