Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0418
(309 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 21 2.6
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 21 2.6
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 2.6
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 21 4.5
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 21 4.5
AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phospha... 21 4.5
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 20 5.9
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 20 5.9
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 20 5.9
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 20 5.9
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 20 5.9
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 20 7.8
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 21.4 bits (43), Expect = 2.6
Identities = 8/30 (26%), Positives = 14/30 (46%)
Frame = +1
Query: 94 IKQTTKINAYFLRILQVFNNNNYTCYPIDF 183
+ Q + Y QV++ N+TC + F
Sbjct: 209 LPQLQLVKNYTADCTQVYSTGNFTCLEVVF 238
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 2.6
Identities = 9/18 (50%), Positives = 12/18 (66%), Gaps = 1/18 (5%)
Frame = +1
Query: 145 FNNNNYTCY-PIDFNIAY 195
+NNNNY Y + +NI Y
Sbjct: 96 YNNNNYNNYKKLYYNINY 113
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.4 bits (43), Expect = 2.6
Identities = 9/18 (50%), Positives = 12/18 (66%), Gaps = 1/18 (5%)
Frame = +1
Query: 145 FNNNNYTCY-PIDFNIAY 195
+NNNNY Y + +NI Y
Sbjct: 106 YNNNNYNNYKKLYYNINY 123
Score = 19.8 bits (39), Expect = 7.8
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +1
Query: 145 FNNNNYTCYPIDFN 186
+NNNNY Y + N
Sbjct: 96 YNNNNYNNYNYNNN 109
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 20.6 bits (41), Expect = 4.5
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +1
Query: 115 NAYFLRILQVFNNNNYTCYPIDFNIAY 195
N Y I NNNNY + +NI Y
Sbjct: 87 NNYISNISNYNNNNNYN-KKLYYNINY 112
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 20.6 bits (41), Expect = 4.5
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +1
Query: 115 NAYFLRILQVFNNNNYTCYPIDFNIAY 195
N Y I NNNNY + +NI Y
Sbjct: 325 NNYISNISNYNNNNNYN-KKLYYNINY 350
>AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phosphate
dehydrogenase protein.
Length = 363
Score = 20.6 bits (41), Expect = 4.5
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -2
Query: 296 RQHPHHTFHTRNY 258
R HP + TRNY
Sbjct: 344 RNHPEYIDETRNY 356
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 20.2 bits (40), Expect = 5.9
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +1
Query: 145 FNNNNYTCYPIDFNI 189
++ N+TC I FN+
Sbjct: 195 YSTGNFTCIQIVFNL 209
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 20.2 bits (40), Expect = 5.9
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +1
Query: 148 NNNNYTCYPIDFNIAYFYY 204
NN NY Y ++N YY
Sbjct: 307 NNYNYKNYNNNYNSKKLYY 325
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 5.9
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +1
Query: 148 NNNNYTCYPIDFNIAYFYY 204
NN NY Y ++N YY
Sbjct: 318 NNYNYKNYNNNYNSKKLYY 336
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 20.2 bits (40), Expect = 5.9
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = +1
Query: 124 FLRILQVFNNNNYTCYPI 177
+L +Q+ + NYTC+ +
Sbjct: 368 YLTKVQLIHAGNYTCHAV 385
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 20.2 bits (40), Expect = 5.9
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +1
Query: 19 RITXNDIYXLFITENSFFDE 78
R+ I L +TE FFD+
Sbjct: 49 RLAKKAIQVLGVTEKEFFDQ 68
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 19.8 bits (39), Expect = 7.8
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1
Query: 145 FNNNNYTCYPIDFNIAY 195
+NN N P+ +NI Y
Sbjct: 324 YNNYNNNYKPLHYNINY 340
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,217
Number of Sequences: 438
Number of extensions: 1519
Number of successful extensions: 20
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 6471036
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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