Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0410
(338 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 109 4e-25
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 109 5e-25
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 108 1e-24
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 108 1e-24
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 107 2e-24
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 105 7e-24
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 103 3e-23
03_01_0034 + 318432-318825,318902-319851 101 1e-22
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 56 5e-09
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 49 8e-07
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 46 8e-06
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 41 3e-04
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 40 5e-04
05_03_0517 - 14936085-14936867 29 1.2
07_01_1133 - 10550799-10551137,10552195-10552254,10555693-105574... 28 1.6
02_04_0648 - 24716249-24717841 28 1.6
11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591 28 2.1
07_03_0826 - 21774445-21774852,21776047-21776083,21776750-217768... 27 2.8
04_04_0178 - 23337801-23337896,23337999-23338067,23338171-233382... 27 2.8
03_06_0772 - 36162537-36162745,36163131-36163171,36163316-361636... 27 3.8
01_06_1166 - 35059844-35060019,35060203-35060590,35061048-35061305 27 5.0
12_01_0796 + 7292523-7292783,7292963-7293018,7295274-7295331,729... 26 8.7
04_03_0856 + 20336390-20336906,20337276-20337397 26 8.7
03_05_1129 - 30595580-30595771,30596119-30597162 26 8.7
03_05_0007 - 19536239-19536532,19536937-19537047,19537126-195376... 26 8.7
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 109 bits (263), Expect = 4e-25
Identities = 48/62 (77%), Positives = 51/62 (82%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLERXXVYYNEASGGKYV 245
MR I+HIQ GQCGNQIGAKFWE+I DEHGID TG Y G SD LER VYYNEASGG+YV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV 60
Query: 246 PR 251
PR
Sbjct: 61 PR 62
Score = 31.5 bits (68), Expect = 0.17
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +1
Query: 295 SXPFGQIFRPDNFV 336
S P+GQIFRPDNFV
Sbjct: 78 SGPYGQIFRPDNFV 91
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 109 bits (262), Expect = 5e-25
Identities = 47/62 (75%), Positives = 51/62 (82%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLERXXVYYNEASGGKYV 245
MR I+HIQ GQCGNQIGAKFWE+I DEHG+D TG Y G SD LER VYYNEASGG+YV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLERINVYYNEASGGRYV 60
Query: 246 PR 251
PR
Sbjct: 61 PR 62
Score = 32.7 bits (71), Expect = 0.076
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1
Query: 295 SXPFGQIFRPDNFV 336
S PFGQIFRPDNFV
Sbjct: 78 SGPFGQIFRPDNFV 91
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 108 bits (259), Expect = 1e-24
Identities = 46/63 (73%), Positives = 52/63 (82%)
Frame = +3
Query: 63 KMRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLERXXVYYNEASGGKY 242
KMR I+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G SD LER VYYNEAS G++
Sbjct: 180 KMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGRF 239
Query: 243 VPR 251
VPR
Sbjct: 240 VPR 242
Score = 30.3 bits (65), Expect = 0.40
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 301 PFGQIFRPDNFV 336
P+GQIFRPDNFV
Sbjct: 260 PYGQIFRPDNFV 271
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 108 bits (259), Expect = 1e-24
Identities = 47/62 (75%), Positives = 51/62 (82%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLERXXVYYNEASGGKYV 245
MR I+HIQ GQCGNQIGAKFWE+I DEHGID TG Y G SD LER VYYNEASGG++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRFV 60
Query: 246 PR 251
PR
Sbjct: 61 PR 62
Score = 32.7 bits (71), Expect = 0.076
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1
Query: 295 SXPFGQIFRPDNFV 336
S PFGQIFRPDNFV
Sbjct: 78 SGPFGQIFRPDNFV 91
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 107 bits (257), Expect = 2e-24
Identities = 46/62 (74%), Positives = 51/62 (82%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLERXXVYYNEASGGKYV 245
MR I+HIQ GQCGNQIGAKFWE++ DEHGIDPTG Y G SD LER VYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGRFV 60
Query: 246 PR 251
PR
Sbjct: 61 PR 62
Score = 30.3 bits (65), Expect = 0.40
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 301 PFGQIFRPDNFV 336
P+GQIFRPDNFV
Sbjct: 80 PYGQIFRPDNFV 91
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 105 bits (253), Expect = 7e-24
Identities = 45/62 (72%), Positives = 51/62 (82%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLERXXVYYNEASGGKYV 245
MR I+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G SD LER VYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFV 60
Query: 246 PR 251
PR
Sbjct: 61 PR 62
Score = 30.3 bits (65), Expect = 0.40
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 301 PFGQIFRPDNFV 336
P+GQIFRPDNFV
Sbjct: 80 PYGQIFRPDNFV 91
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 103 bits (248), Expect = 3e-23
Identities = 44/62 (70%), Positives = 50/62 (80%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLERXXVYYNEASGGKYV 245
MR I+HIQ GQCGNQIGAKFWE+I EHG+DPTG Y G S LER VY+NEASGG++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTGTSPQQLERINVYFNEASGGRHV 60
Query: 246 PR 251
PR
Sbjct: 61 PR 62
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1
Query: 295 SXPFGQIFRPDNFV 336
S P G IFRPDNFV
Sbjct: 78 SGPIGGIFRPDNFV 91
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 101 bits (242), Expect = 1e-22
Identities = 44/62 (70%), Positives = 49/62 (79%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLERXXVYYNEASGGKYV 245
MR I+HIQ GQCGNQIGAKFWE++ EHGID TG Y G SD LER VYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQLERVNVYYNEASCGRFV 60
Query: 246 PR 251
PR
Sbjct: 61 PR 62
Score = 29.5 bits (63), Expect = 0.70
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 295 SXPFGQIFRPDNFV 336
S P+G IFRPDNFV
Sbjct: 78 SGPYGHIFRPDNFV 91
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 56.4 bits (130), Expect = 5e-09
Identities = 25/61 (40%), Positives = 35/61 (57%)
Frame = +3
Query: 69 RXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLERXXVYYNEASGGKYVP 248
R I+ IQ GQCGNQIG +FW+ + EHGI G + +R V++ +A Y+P
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 249 R 251
R
Sbjct: 63 R 63
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 49.2 bits (112), Expect = 8e-07
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXL--ERXXVYYNEASGGK 239
MR I+ I GQ G Q+G WE+ EHGI+P G + + + +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 240 YVPR 251
+VPR
Sbjct: 61 HVPR 64
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 46.0 bits (104), Expect = 8e-06
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXS--DXXLERXXVYYNEASGGK 239
MR + I GQ G Q+G WE+ EHGI P G G + +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 240 YVPR 251
+VPR
Sbjct: 61 HVPR 64
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 40.7 bits (91), Expect = 3e-04
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXL----ERXXVYYNEASG 233
MR + I GQ G Q+G WE+ EHGI G SD + + +++E
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQM--PSDRTVGGGDDAFNTFFSETGA 58
Query: 234 GKYVPR 251
GK+VPR
Sbjct: 59 GKHVPR 64
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 39.9 bits (89), Expect = 5e-04
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG 167
MR I+ I GQ G Q+G WE+ EHGI P G
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDG 34
>05_03_0517 - 14936085-14936867
Length = 260
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 223 KPPAASTCPAPPRRLGARXHGLCPSXP 303
+PP+A+ A PRR A G CPS P
Sbjct: 134 RPPSAAAASAEPRRT-ASGSGTCPSSP 159
>07_01_1133 -
10550799-10551137,10552195-10552254,10555693-10557401,
10557534-10557616,10577533-10578074
Length = 910
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +3
Query: 102 GNQIGAKFWEIISDEHG--IDPTGAYHGXSDXXLER 203
G+Q +KFW+ + +E G ++ + AYH +D ER
Sbjct: 540 GSQFTSKFWQKLQEEMGTHLNFSTAYHPQTDGQTER 575
>02_04_0648 - 24716249-24717841
Length = 530
Score = 28.3 bits (60), Expect = 1.6
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +3
Query: 114 GAKFWEIISDEHGIDPTGAYHG 179
G +++E++ DEHGI+P ++G
Sbjct: 366 GLRYFELMCDEHGIEPEIEHYG 387
>11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591
Length = 573
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +3
Query: 102 GNQIGAKFWEIISDEHG--IDPTGAYHGXSDXXLER 203
G+Q +KFW+ + +E G ++ + AYH +D ER
Sbjct: 331 GSQFTSKFWQKLQEELGTRLNFSTAYHPQTDGQTER 366
>07_03_0826 -
21774445-21774852,21776047-21776083,21776750-21776839,
21777251-21777399
Length = 227
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = -1
Query: 308 PKGXDGQSPXCRAPSRRGGAGHVLAAGG 225
P G DG C+A RRGG G V GG
Sbjct: 133 PTGFDGD---CQAMQRRGGVGGVDGVGG 157
>04_04_0178 -
23337801-23337896,23337999-23338067,23338171-23338253,
23338694-23338772,23338956-23339120,23339230-23339274,
23339370-23339444,23340135-23340311,23340398-23340721,
23340829-23340897
Length = 393
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = -1
Query: 257 GGAGHVLAAGGFIVVYXXALQXXVRXPMVGTGGVDAVLVGDDL 129
G G +A G IVV L V GV AVLVG+ L
Sbjct: 327 GERGQTIAQKGIIVVGESGLFTPDHISFVQNAGVKAVLVGESL 369
>03_06_0772 -
36162537-36162745,36163131-36163171,36163316-36163600,
36163710-36163813,36163924-36164021,36165039-36165213,
36166429-36166578,36167113-36167193,36167246-36167299,
36167422-36167679
Length = 484
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 229 PAASTCPAPPRRLGARXHGLCPS 297
PA ST PPR+L R H + PS
Sbjct: 15 PAPSTPTPPPRQLSPRPHHIPPS 37
>01_06_1166 - 35059844-35060019,35060203-35060590,35061048-35061305
Length = 273
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +1
Query: 232 AASTCPAPPRRLGARXHGLCPSXPF 306
AAS PAP R+GA H L S PF
Sbjct: 10 AASASPAPAARVGA-FHPLASSSPF 33
>12_01_0796 +
7292523-7292783,7292963-7293018,7295274-7295331,
7295777-7295843,7296461-7296516,7296638-7296691,
7296836-7296961
Length = 225
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1
Query: 220 MKPPAASTCPAPPRRLGARXHGLCPSXP 303
M PP +S P RRLG L P P
Sbjct: 1 MSPPVSSGAPVQERRLGVLLSHLRPCAP 28
>04_03_0856 + 20336390-20336906,20337276-20337397
Length = 212
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -1
Query: 332 KLSGRKICPKGXDGQSPXCRAPSRRGGAGHVLAAGG 225
KL+GRK G + A RRGG G + GG
Sbjct: 44 KLAGRKDGGGGASLEGAAAGASRRRGGGGGQIRGGG 79
>03_05_1129 - 30595580-30595771,30596119-30597162
Length = 411
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -1
Query: 293 GQSPXCRAPSRRGGAGHVLAAGGFIVVYXXAL 198
G S + R G A HVL GG + Y A+
Sbjct: 96 GGSCAVKMELRNGSAAHVLLPGGLVTSYKPAM 127
>03_05_0007 -
19536239-19536532,19536937-19537047,19537126-19537690,
19537737-19537822
Length = 351
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = -1
Query: 308 PKGXDGQSPXCRAPSRRGG-AGHVLAAGG 225
P G DG + SRRGG AG AGG
Sbjct: 151 PSGGDGAAECATGSSRRGGDAGAKTNAGG 179
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,987,780
Number of Sequences: 37544
Number of extensions: 145266
Number of successful extensions: 605
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 601
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 470052804
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -