Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0410
(338 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 125 8e-30
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 120 3e-28
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 120 3e-28
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 118 2e-27
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 8e-07
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 45 1e-05
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 44 2e-05
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 44 3e-05
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 4e-05
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 44 4e-05
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 43 6e-05
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 1e-04
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 1e-04
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 1e-04
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.005
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 33 0.078
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 32 0.10
SB_9321| Best HMM Match : DDE (HMM E-Value=5.40004e-41) 26 6.8
SB_38407| Best HMM Match : DDE (HMM E-Value=5.40004e-41) 26 6.8
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 26 9.0
SB_44647| Best HMM Match : C_tripleX (HMM E-Value=0.00011) 26 9.0
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 125 bits (302), Expect = 8e-30
Identities = 56/71 (78%), Positives = 59/71 (83%)
Frame = +3
Query: 39 IYSSHK*NKMRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLERXXVYY 218
+YSS KMR IVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHG SD LER VYY
Sbjct: 205 VYSSKLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYY 264
Query: 219 NEASGGKYVPR 251
NEA+GGKYVPR
Sbjct: 265 NEATGGKYVPR 275
Score = 32.7 bits (71), Expect = 0.078
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1
Query: 295 SXPFGQIFRPDNFV 336
S PFGQIFRPDNFV
Sbjct: 291 SGPFGQIFRPDNFV 304
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 120 bits (289), Expect = 3e-28
Identities = 52/62 (83%), Positives = 54/62 (87%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLERXXVYYNEASGGKYV 245
MR IVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHG SD LER VYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 246 PR 251
PR
Sbjct: 61 PR 62
Score = 32.7 bits (71), Expect = 0.078
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1
Query: 295 SXPFGQIFRPDNFV 336
S PFGQIFRPDNFV
Sbjct: 78 SGPFGQIFRPDNFV 91
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 120 bits (289), Expect = 3e-28
Identities = 52/62 (83%), Positives = 54/62 (87%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLERXXVYYNEASGGKYV 245
MR IVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHG SD LER VYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 246 PR 251
PR
Sbjct: 61 PR 62
Score = 32.7 bits (71), Expect = 0.078
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1
Query: 295 SXPFGQIFRPDNFV 336
S PFGQIFRPDNFV
Sbjct: 78 SGPFGQIFRPDNFV 91
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 118 bits (283), Expect = 2e-27
Identities = 51/62 (82%), Positives = 54/62 (87%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLERXXVYYNEASGGKYV 245
MR IV +QAGQCGNQIGAKFWE+ISDEHGIDPTG YHG SD LER VYYNEA+GGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 246 PR 251
PR
Sbjct: 61 PR 62
Score = 32.7 bits (71), Expect = 0.078
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1
Query: 295 SXPFGQIFRPDNFV 336
S PFGQIFRPDNFV
Sbjct: 78 SGPFGQIFRPDNFV 91
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 49.2 bits (112), Expect = 8e-07
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXS--DXXLERXXVYYNEASGGK 239
MR + + GQ G QIG WE+ EHGI P G D + +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 240 YVPR 251
+VPR
Sbjct: 61 HVPR 64
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 45.2 bits (102), Expect = 1e-05
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXL----ERXXVYYNEASG 233
MR + I GQ G QIG WE+ EHGI P G SD + + +++E
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQM--PSDKTIGGGDDSFNTFFSETGA 58
Query: 234 GKYVPR 251
GK+VPR
Sbjct: 59 GKHVPR 64
Score = 43.2 bits (97), Expect = 6e-05
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +3
Query: 69 RXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXL----ERXXVYYNEASGG 236
R + I GQ G QIG WE+ EHGI P G SD + + +++E G
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQM--PSDKTIGGGDDSFNTFFSETGAG 492
Query: 237 KYVPR 251
K+VPR
Sbjct: 493 KHVPR 497
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 44.4 bits (100), Expect = 2e-05
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHG--XSDXXLERXXVYYNEASGGK 239
MR + I GQ G QIG WE+ EHGI P G + +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 240 YVPR 251
+VPR
Sbjct: 61 HVPR 64
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 44.0 bits (99), Expect = 3e-05
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXL----ERXXVYYNEASG 233
MR + I GQ G Q+G WE+ EHGI P G SD + + +++E
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQM--PSDKTIGGGDDSFNTFFSETGA 58
Query: 234 GKYVPR 251
GK+VPR
Sbjct: 59 GKHVPR 64
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 43.6 bits (98), Expect = 4e-05
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXL----ERXXVYYNEASG 233
MR + + GQ G Q+G WE+ EHGI P G SD + + +++E
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQM--PSDKTIGGGDDSFNTFFSETGS 58
Query: 234 GKYVPR 251
GK+VPR
Sbjct: 59 GKHVPR 64
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 43.6 bits (98), Expect = 4e-05
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXL----ERXXVYYNEASG 233
+R + I GQ G QIG WE+ EHGI P G SD + + +++E
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQM--PSDKTIGGGDDSFNTFFSETGA 643
Query: 234 GKYVPR 251
GK+VPR
Sbjct: 644 GKHVPR 649
Score = 43.2 bits (97), Expect = 6e-05
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +3
Query: 69 RXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXL----ERXXVYYNEASGG 236
R + I GQ G QIG WE+ EHGI P G SD + + +++E G
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQM--PSDKTIGGGDDSFNTFFSETGAG 571
Query: 237 KYVPR 251
K+VPR
Sbjct: 572 KHVPR 576
Score = 42.7 bits (96), Expect = 7e-05
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +3
Query: 69 RXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXL----ERXXVYYNEASGG 236
R + + GQ G QIG WE+ EHGI P G SD + + +++E G
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQM--PSDKTIGGGDDSFNTFFSETGAG 123
Query: 237 KYVPR 251
K+VPR
Sbjct: 124 KHVPR 128
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 43.2 bits (97), Expect = 6e-05
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +3
Query: 69 RXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXL----ERXXVYYNEASGG 236
R + I GQ G QIG WE+ EHGI P G SD + + +++E G
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQM--PSDKTIGGGDDSFNTFFSETGAG 58
Query: 237 KYVPR 251
K+VPR
Sbjct: 59 KHVPR 63
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 42.3 bits (95), Expect = 1e-04
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLER----XXVYYNEASG 233
MR + I GQ G QIG WE+ EHGI P G H SD +R +++E +
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFSETAS 253
Query: 234 GKY 242
GK+
Sbjct: 254 GKH 256
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 42.3 bits (95), Expect = 1e-04
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +3
Query: 69 RXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXL----ERXXVYYNEASGG 236
R V I GQ G Q+G WE+ EHGI P G SD + + +++E G
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQM--PSDKTIGGGDDSFNTFFSETGAG 477
Query: 237 KYVPR 251
K+VPR
Sbjct: 478 KHVPR 482
Score = 30.7 bits (66), Expect = 0.32
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = +3
Query: 111 IGAKFWEIISDEHGIDPTGAYHGXSDXXL----ERXXVYYNEASGGKYVPR 251
+G WE+ EHGI P G SD + + +++E GK+VPR
Sbjct: 1 MGNACWELYCLEHGIQPDGQM--PSDKTIGGGDDSFNTFFSETGAGKHVPR 49
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 41.9 bits (94), Expect = 1e-04
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = +3
Query: 69 RXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXL----ERXXVYYNEASGG 236
R + I GQ G QIG WE+ EHGI P G SD + + ++ E G
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQM--PSDKTIGGGDDAFNTFFAETGAG 430
Query: 237 KYVPR 251
K+VPR
Sbjct: 431 KHVPR 435
Score = 41.5 bits (93), Expect = 2e-04
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +3
Query: 69 RXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXL----ERXXVYYNEASGG 236
R + + GQ G Q+G WE+ EHGI P G SD + + +++E G
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQM--PSDKTIGGGDDSFNTFFSETGAG 863
Query: 237 KYVPR 251
K+VPR
Sbjct: 864 KHVPR 868
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 36.7 bits (81), Expect = 0.005
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 123 FWEIISDEHGIDPTGAYHG-XSDXXLERXXVYYNE 224
FWE+I++EHGIDP G S +R VY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 32.7 bits (71), Expect = 0.078
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1
Query: 295 SXPFGQIFRPDNFV 336
S PFGQIFRPDNFV
Sbjct: 23 SGPFGQIFRPDNFV 36
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 32.3 bits (70), Expect = 0.10
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +3
Query: 75 IVHIQAGQCGNQIGAKFWEIISDE 146
IV +Q GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_9321| Best HMM Match : DDE (HMM E-Value=5.40004e-41)
Length = 700
Score = 26.2 bits (55), Expect = 6.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 166 PVGSMPCSSEMISQNLAPIWLPH*PAWICT 77
P + PC +++ S+ L IW + AWI T
Sbjct: 273 PTANPPCFAKLDSECLPVIWRANRRAWITT 302
>SB_38407| Best HMM Match : DDE (HMM E-Value=5.40004e-41)
Length = 700
Score = 26.2 bits (55), Expect = 6.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 166 PVGSMPCSSEMISQNLAPIWLPH*PAWICT 77
P + PC +++ S+ L IW + AWI T
Sbjct: 273 PTANPPCFAKLDSECLPVIWRANRRAWITT 302
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 25.8 bits (54), Expect = 9.0
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1
Query: 301 PFGQIFRPDNFV 336
P G +FRPDNFV
Sbjct: 36 PLGNMFRPDNFV 47
>SB_44647| Best HMM Match : C_tripleX (HMM E-Value=0.00011)
Length = 812
Score = 25.8 bits (54), Expect = 9.0
Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 3/44 (6%)
Frame = +1
Query: 202 ASMYTTMKPPAASTCPAPPRRLGAR---XHGLCPSXPFGQIFRP 324
AS T +KPP C PP GA +C P Q+ RP
Sbjct: 44 ASGETPVKPPGKKICNKPPSSCGATDAPIPAMCTKLP--QLVRP 85
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,417,784
Number of Sequences: 59808
Number of extensions: 131161
Number of successful extensions: 357
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 344
length of database: 16,821,457
effective HSP length: 73
effective length of database: 12,455,473
effective search space used: 485763447
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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