Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0410
(338 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 122 7e-29
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 113 3e-26
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 109 5e-25
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 109 5e-25
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 108 1e-24
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 107 3e-24
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 86 7e-18
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 86 7e-18
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 53 5e-08
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 53 5e-08
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 53 6e-08
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 53 6e-08
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 52 8e-08
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 50 4e-07
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 50 4e-07
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 49 7e-07
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 48 2e-06
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 48 2e-06
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 48 2e-06
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 46 7e-06
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 46 7e-06
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 46 7e-06
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 44 3e-05
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 44 3e-05
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 43 5e-05
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 32 0.091
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 28 2.0
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 28 2.0
Z69663-5|CAA93512.2| 1002|Caenorhabditis elegans Hypothetical pr... 27 4.5
Z69661-8|CAA93496.2| 1002|Caenorhabditis elegans Hypothetical pr... 27 4.5
DQ178241-1|ABA18180.1| 1010|Caenorhabditis elegans argonaute-lik... 27 4.5
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 27 4.5
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 27 4.5
AF016682-2|AAO38604.1| 891|Caenorhabditis elegans Argonaute (pl... 27 4.5
AF016682-1|AAB66187.2| 910|Caenorhabditis elegans Argonaute (pl... 27 4.5
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 27 4.5
Z70307-3|CAA94329.1| 308|Caenorhabditis elegans Hypothetical pr... 26 7.9
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 122 bits (294), Expect = 7e-29
Identities = 54/62 (87%), Positives = 56/62 (90%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLERXXVYYNEASGGKYV 245
MR IVHIQAGQCGNQIGAKFWE+ISDEHGIDPTGAY+G SD LER VYYNEASGGKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 246 PR 251
PR
Sbjct: 61 PR 62
Score = 30.7 bits (66), Expect = 0.28
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 301 PFGQIFRPDNFV 336
PFGQ+FRPDNFV
Sbjct: 80 PFGQLFRPDNFV 91
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 113 bits (272), Expect = 3e-26
Identities = 49/62 (79%), Positives = 52/62 (83%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLERXXVYYNEASGGKYV 245
MR IVH+QAGQCGNQIGAKFWE+ISDEHGI P G Y G SD LER VYYNEA+GGKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 246 PR 251
PR
Sbjct: 61 PR 62
Score = 31.9 bits (69), Expect = 0.12
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +1
Query: 295 SXPFGQIFRPDNFV 336
S PFGQ+FRPDNFV
Sbjct: 78 SGPFGQLFRPDNFV 91
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 109 bits (262), Expect = 5e-25
Identities = 48/62 (77%), Positives = 51/62 (82%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLERXXVYYNEASGGKYV 245
MR IVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y G SD LER VYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 246 PR 251
PR
Sbjct: 61 PR 62
Score = 30.7 bits (66), Expect = 0.28
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +1
Query: 295 SXPFGQIFRPDNFV 336
S PFGQ+FRPDN+V
Sbjct: 78 SGPFGQLFRPDNYV 91
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 109 bits (262), Expect = 5e-25
Identities = 48/62 (77%), Positives = 51/62 (82%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLERXXVYYNEASGGKYV 245
MR IVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y G SD LER VYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 246 PR 251
PR
Sbjct: 61 PR 62
Score = 30.7 bits (66), Expect = 0.28
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +1
Query: 295 SXPFGQIFRPDNFV 336
S PFGQ+FRPDN+V
Sbjct: 78 SGPFGQLFRPDNYV 91
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 108 bits (259), Expect = 1e-24
Identities = 46/62 (74%), Positives = 51/62 (82%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLERXXVYYNEASGGKYV 245
MR IVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G SD LER VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 246 PR 251
PR
Sbjct: 61 PR 62
Score = 31.9 bits (69), Expect = 0.12
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +1
Query: 295 SXPFGQIFRPDNFV 336
S PFGQ+FRPDNFV
Sbjct: 78 SGPFGQLFRPDNFV 91
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 107 bits (256), Expect = 3e-24
Identities = 45/62 (72%), Positives = 51/62 (82%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLERXXVYYNEASGGKYV 245
MR IVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G +D LER VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 246 PR 251
PR
Sbjct: 61 PR 62
Score = 31.9 bits (69), Expect = 0.12
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +1
Query: 295 SXPFGQIFRPDNFV 336
S PFGQ+FRPDNFV
Sbjct: 78 SGPFGQLFRPDNFV 91
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 85.8 bits (203), Expect = 7e-18
Identities = 36/62 (58%), Positives = 43/62 (69%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLERXXVYYNEASGGKYV 245
M+ I+++Q GQCGNQIGAKFWE IS+EHG+ G Y G + LER YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 246 PR 251
PR
Sbjct: 61 PR 62
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 85.8 bits (203), Expect = 7e-18
Identities = 36/62 (58%), Positives = 43/62 (69%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLERXXVYYNEASGGKYV 245
M+ I+++Q GQCGNQIGAKFWE IS+EHG+ G Y G + LER YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 246 PR 251
PR
Sbjct: 61 PR 62
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 53.2 bits (122), Expect = 5e-08
Identities = 24/62 (38%), Positives = 32/62 (51%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLERXXVYYNEASGGKYV 245
MR ++ I GQ G QIG WE+ EHGI P G S E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 246 PR 251
PR
Sbjct: 61 PR 62
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 53.2 bits (122), Expect = 5e-08
Identities = 24/62 (38%), Positives = 32/62 (51%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLERXXVYYNEASGGKYV 245
MR ++ I GQ G QIG WE+ EHGI P G S E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 246 PR 251
PR
Sbjct: 61 PR 62
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 52.8 bits (121), Expect = 6e-08
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLERXXVYYNEASGGKYV 245
MR ++ I GQ G QIG WE+ EHGI P G E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 246 PR 251
PR
Sbjct: 61 PR 62
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 52.8 bits (121), Expect = 6e-08
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLERXXVYYNEASGGKYV 245
MR ++ I GQ G QIG WE+ EHGI P G E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 246 PR 251
PR
Sbjct: 61 PR 62
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 52.4 bits (120), Expect = 8e-08
Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +3
Query: 69 RXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYH---GXSDXXLERXXVYYNEASGGK 239
R ++ I GQ G QIG WE+ EHGI P G YH D E ++ E +GGK
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGK 66
Query: 240 YVPR 251
+VPR
Sbjct: 67 HVPR 70
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 50.0 bits (114), Expect = 4e-07
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLERXXVYYNEASGGKYV 245
MR ++ I GQ G QIG WE+ EHGI P G ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 246 PR 251
PR
Sbjct: 61 PR 62
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 50.0 bits (114), Expect = 4e-07
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLERXXVYYNEASGGKYV 245
MR ++ I GQ G QIG WE+ EHGI P G ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 246 PR 251
PR
Sbjct: 61 PR 62
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 49.2 bits (112), Expect = 7e-07
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLE--RXXVYYNEASGGK 239
MR IV I GQ G QIG WE+ EHGI P G + +E +++E GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 240 YVPR 251
+VPR
Sbjct: 61 HVPR 64
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 48.0 bits (109), Expect = 2e-06
Identities = 21/59 (35%), Positives = 33/59 (55%)
Frame = +3
Query: 75 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLERXXVYYNEASGGKYVPR 251
++ + GQCGNQ+ FW+ + DEHGI+ G D ++ ++Y +A YVPR
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPR 64
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 48.0 bits (109), Expect = 2e-06
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +3
Query: 60 NKMRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXL--ERXXVYYNEASG 233
N+ R ++ I GQ G Q+G WE+ EHGI P G + + + +++E
Sbjct: 4 NRSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMA 63
Query: 234 GKYVPR 251
GK+VPR
Sbjct: 64 GKHVPR 69
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 48.0 bits (109), Expect = 2e-06
Identities = 21/59 (35%), Positives = 33/59 (55%)
Frame = +3
Query: 75 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLERXXVYYNEASGGKYVPR 251
++ + GQCGNQ+ FW+ + DEHGI+ G D ++ ++Y +A YVPR
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPR 64
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 46.0 bits (104), Expect = 7e-06
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXL----ERXXVYYNEASG 233
MR ++ I GQ G QIG WE+ EHGI P G SD L + +++E
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQM--PSDKSLGGSDDSFSTFFSETGS 58
Query: 234 GKYVPR 251
G++VPR
Sbjct: 59 GRHVPR 64
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 46.0 bits (104), Expect = 7e-06
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXL----ERXXVYYNEASG 233
MR ++ I GQ G QIG WE+ EHGI P G SD L + +++E
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQM--PSDKSLGGSDDSFSTFFSETGS 58
Query: 234 GKYVPR 251
G++VPR
Sbjct: 59 GRHVPR 64
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 46.0 bits (104), Expect = 7e-06
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXL----ERXXVYYNEASG 233
MR ++ I GQ G QIG WE+ EHGI P G SD L + +++E
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQM--PSDKSLGGSDDSFSTFFSETGS 58
Query: 234 GKYVPR 251
G++VPR
Sbjct: 59 GRHVPR 64
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 44.0 bits (99), Expect = 3e-05
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 69 RXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG-AYHGXSDXXLERXXVYYNEASGGKYV 245
R V I GQ G QIG WE+ EHG+D G + + +++E+ GK+V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 246 PR 251
PR
Sbjct: 66 PR 67
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 44.0 bits (99), Expect = 3e-05
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +3
Query: 69 RXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXL----ERXXVYYNEASGG 236
R ++ I GQ G QIG WE+ EHGI P G SD L + +++E G
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQM--PSDKSLGGSDDSFSTFFSETGSG 58
Query: 237 KYVPR 251
++VPR
Sbjct: 59 RHVPR 63
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 43.2 bits (97), Expect = 5e-05
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLERXXVYYNEASGGKYV 245
MR ++ I GQ G QIG WE+ EHGI P G D ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGT-SMEPDGNSGSLGTFFSDTGYGRHV 59
Query: 246 PR 251
PR
Sbjct: 60 PR 61
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 32.3 bits (70), Expect = 0.091
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +3
Query: 144 EHGIDPTGAYHGXSDXX---LERXXVYYNEASGGKYVPR 251
EHGI P G YH D E ++ E +GGK+VPR
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPR 42
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -1
Query: 293 GQSPXCRAPSRRGGAGHVLAAGGFI 219
G++P A + GG GHV +AGG I
Sbjct: 493 GETPAAGAGAGGGGGGHVASAGGGI 517
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -1
Query: 293 GQSPXCRAPSRRGGAGHVLAAGGFI 219
G++P A + GG GHV +AGG I
Sbjct: 493 GETPAAGAGAGGGGGGHVASAGGGI 517
>Z69663-5|CAA93512.2| 1002|Caenorhabditis elegans Hypothetical
protein F48F7.1 protein.
Length = 1002
Score = 26.6 bits (56), Expect = 4.5
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2
Query: 283 HXAGLQVDEEARGTYLPPE 227
H LQV +E + TYLPPE
Sbjct: 467 HLPCLQVGQEQKHTYLPPE 485
>Z69661-8|CAA93496.2| 1002|Caenorhabditis elegans Hypothetical
protein F48F7.1 protein.
Length = 1002
Score = 26.6 bits (56), Expect = 4.5
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2
Query: 283 HXAGLQVDEEARGTYLPPE 227
H LQV +E + TYLPPE
Sbjct: 467 HLPCLQVGQEQKHTYLPPE 485
>DQ178241-1|ABA18180.1| 1010|Caenorhabditis elegans argonaute-like
protein.
Length = 1010
Score = 26.6 bits (56), Expect = 4.5
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2
Query: 283 HXAGLQVDEEARGTYLPPE 227
H LQV +E + TYLPPE
Sbjct: 475 HLPCLQVGQEQKHTYLPPE 493
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 26.6 bits (56), Expect = 4.5
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +1
Query: 229 PAASTCPAPPRRLGARXHGLCPSXPFG 309
P C PP R G+R CP+ +G
Sbjct: 1481 PVQGCCDCPPGRYGSRCQFSCPNGFYG 1507
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 26.6 bits (56), Expect = 4.5
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +1
Query: 229 PAASTCPAPPRRLGARXHGLCPSXPFG 309
P C PP R G+R CP+ +G
Sbjct: 1481 PVQGCCDCPPGRYGSRCQFSCPNGFYG 1507
>AF016682-2|AAO38604.1| 891|Caenorhabditis elegans Argonaute
(plant)-like gene protein2, isoform b protein.
Length = 891
Score = 26.6 bits (56), Expect = 4.5
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2
Query: 283 HXAGLQVDEEARGTYLPPE 227
H LQV +E + TYLPPE
Sbjct: 353 HLPCLQVGQEQKHTYLPPE 371
>AF016682-1|AAB66187.2| 910|Caenorhabditis elegans Argonaute
(plant)-like gene protein2, isoform a protein.
Length = 910
Score = 26.6 bits (56), Expect = 4.5
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2
Query: 283 HXAGLQVDEEARGTYLPPE 227
H LQV +E + TYLPPE
Sbjct: 372 HLPCLQVGQEQKHTYLPPE 390
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 26.6 bits (56), Expect = 4.5
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 229 PAASTCPAPPRRLGA 273
P A+ CP PPR LGA
Sbjct: 293 PDAAYCPCPPRTLGA 307
>Z70307-3|CAA94329.1| 308|Caenorhabditis elegans Hypothetical
protein C39E9.3 protein.
Length = 308
Score = 25.8 bits (54), Expect = 7.9
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -1
Query: 317 KICPKGXDGQSPXCRAPSRRGGAGH 243
KI P+G GQS P G GH
Sbjct: 167 KIGPRGQRGQSGGAGTPGNNGAPGH 191
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,152,776
Number of Sequences: 27780
Number of extensions: 94518
Number of successful extensions: 349
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 347
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 429601520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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