Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0410
(338 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 107 1e-24
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 107 2e-24
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 105 6e-24
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 104 2e-23
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 104 2e-23
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 103 3e-23
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 101 1e-22
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 100 2e-22
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 100 5e-22
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 56 6e-09
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 56 6e-09
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 49 7e-07
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 48 1e-06
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 48 1e-06
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 46 6e-06
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 46 6e-06
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 44 3e-05
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 44 3e-05
At5g09670.2 68418.m01119 loricrin-related contains weak similari... 29 1.0
At5g09670.1 68418.m01118 loricrin-related contains weak similari... 29 1.0
At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,... 27 3.2
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 27 4.2
At1g27595.1 68414.m03365 expressed protein similar to Symplekin ... 27 4.2
At5g64550.1 68418.m08112 loricrin-related contains weak similari... 25 9.7
At5g02220.1 68418.m00143 expressed protein 25 9.7
At4g29690.1 68417.m04229 type I phosphodiesterase/nucleotide pyr... 25 9.7
At3g13050.1 68416.m01626 transporter-related low similarity to a... 25 9.7
At1g70990.1 68414.m08190 proline-rich family protein 25 9.7
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 107 bits (258), Expect = 1e-24
Identities = 46/63 (73%), Positives = 53/63 (84%), Gaps = 1/63 (1%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXS-DXXLERXXVYYNEASGGKY 242
MR I+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+G S D LER VYYNEASGG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 243 VPR 251
VPR
Sbjct: 61 VPR 63
Score = 31.5 bits (68), Expect = 0.15
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +1
Query: 295 SXPFGQIFRPDNFV 336
S P+GQIFRPDNFV
Sbjct: 79 SGPYGQIFRPDNFV 92
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 107 bits (257), Expect = 2e-24
Identities = 46/62 (74%), Positives = 51/62 (82%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLERXXVYYNEASGGKYV 245
MR I+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G SD LER VYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 246 PR 251
PR
Sbjct: 61 PR 62
Score = 30.3 bits (65), Expect = 0.34
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 301 PFGQIFRPDNFV 336
P+GQIFRPDNFV
Sbjct: 80 PYGQIFRPDNFV 91
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 105 bits (253), Expect = 6e-24
Identities = 47/62 (75%), Positives = 50/62 (80%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLERXXVYYNEASGGKYV 245
MR I+HIQ GQCGNQIGAKFWE+I DEHGID TG Y G S LER VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 246 PR 251
PR
Sbjct: 61 PR 62
Score = 32.7 bits (71), Expect = 0.064
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1
Query: 295 SXPFGQIFRPDNFV 336
S PFGQIFRPDNFV
Sbjct: 78 SGPFGQIFRPDNFV 91
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 104 bits (249), Expect = 2e-23
Identities = 45/62 (72%), Positives = 50/62 (80%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLERXXVYYNEASGGKYV 245
MR I+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y G SD LER VYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 246 PR 251
PR
Sbjct: 61 PR 62
Score = 29.5 bits (63), Expect = 0.60
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 295 SXPFGQIFRPDNFV 336
S P+GQ FRPDNFV
Sbjct: 78 SGPYGQTFRPDNFV 91
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 104 bits (249), Expect = 2e-23
Identities = 45/62 (72%), Positives = 50/62 (80%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLERXXVYYNEASGGKYV 245
MR I+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y G SD LER VYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 246 PR 251
PR
Sbjct: 61 PR 62
Score = 29.5 bits (63), Expect = 0.60
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 295 SXPFGQIFRPDNFV 336
S P+GQ FRPDNFV
Sbjct: 78 SGPYGQTFRPDNFV 91
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 103 bits (247), Expect = 3e-23
Identities = 46/63 (73%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHG-XSDXXLERXXVYYNEASGGKY 242
MR I+HIQ GQCGNQIG+KFWE+I DEHGID TG Y G +D LER VYYNEASGG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 243 VPR 251
VPR
Sbjct: 61 VPR 63
Score = 32.7 bits (71), Expect = 0.064
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1
Query: 295 SXPFGQIFRPDNFV 336
S PFGQIFRPDNFV
Sbjct: 79 SGPFGQIFRPDNFV 92
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 101 bits (242), Expect = 1e-22
Identities = 45/62 (72%), Positives = 49/62 (79%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLERXXVYYNEASGGKYV 245
MR I+HIQ GQCGNQIGAKFWE+I EHGID TG G +D LER VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 246 PR 251
PR
Sbjct: 61 PR 62
Score = 32.7 bits (71), Expect = 0.064
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1
Query: 295 SXPFGQIFRPDNFV 336
S PFGQIFRPDNFV
Sbjct: 78 SGPFGQIFRPDNFV 91
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 100 bits (240), Expect = 2e-22
Identities = 43/62 (69%), Positives = 49/62 (79%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLERXXVYYNEASGGKYV 245
MR I+HIQ GQCGNQIGAKFWE++ EHGID TG Y G +D LER VYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 246 PR 251
PR
Sbjct: 61 PR 62
Score = 31.5 bits (68), Expect = 0.15
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +1
Query: 295 SXPFGQIFRPDNFV 336
S P+GQIFRPDNFV
Sbjct: 78 SGPYGQIFRPDNFV 91
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 99.5 bits (237), Expect = 5e-22
Identities = 43/62 (69%), Positives = 50/62 (80%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLERXXVYYNEASGGKYV 245
MR I+HIQ GQCGNQIG+KFWE+++ EHGID TG Y G S+ LER VYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 246 PR 251
PR
Sbjct: 61 PR 62
Score = 31.5 bits (68), Expect = 0.15
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +1
Query: 295 SXPFGQIFRPDNFV 336
S P+GQIFRPDNFV
Sbjct: 78 SGPYGQIFRPDNFV 91
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 56.0 bits (129), Expect = 6e-09
Identities = 24/61 (39%), Positives = 35/61 (57%)
Frame = +3
Query: 69 RXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLERXXVYYNEASGGKYVP 248
R I+ +Q GQCGNQIG +FW+ + EHGI G + +R V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 249 R 251
R
Sbjct: 63 R 63
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 56.0 bits (129), Expect = 6e-09
Identities = 24/61 (39%), Positives = 35/61 (57%)
Frame = +3
Query: 69 RXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXLERXXVYYNEASGGKYVP 248
R I+ +Q GQCGNQIG +FW+ + EHGI G + +R V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 249 R 251
R
Sbjct: 63 R 63
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 49.2 bits (112), Expect = 7e-07
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXL--ERXXVYYNEASGGK 239
MR I+ I GQ G Q+G WE+ EHGI P G S + +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 240 YVPR 251
+VPR
Sbjct: 61 HVPR 64
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 48.4 bits (110), Expect = 1e-06
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXL--ERXXVYYNEASGGK 239
MR I+ I GQ G Q+G WE+ EHGI P G + + + +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 240 YVPR 251
+VPR
Sbjct: 61 HVPR 64
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 48.4 bits (110), Expect = 1e-06
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXL--ERXXVYYNEASGGK 239
MR I+ I GQ G Q+G WE+ EHGI P G + + + +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 240 YVPR 251
+VPR
Sbjct: 61 HVPR 64
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 46.0 bits (104), Expect = 6e-06
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXS--DXXLERXXVYYNEASGGK 239
MR + I GQ G Q+G WE+ EHGI P G G + +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 240 YVPR 251
+VPR
Sbjct: 61 HVPR 64
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 46.0 bits (104), Expect = 6e-06
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXS--DXXLERXXVYYNEASGGK 239
MR + I GQ G Q+G WE+ EHGI P G G + +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 240 YVPR 251
+VPR
Sbjct: 61 HVPR 64
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 44.0 bits (99), Expect = 3e-05
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXL----ERXXVYYNEASG 233
MR + I GQ G Q+G WE+ EHGI P G SD + + +++E
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQM--PSDKTVGGGDDAFNTFFSETGA 58
Query: 234 GKYVPR 251
GK+VPR
Sbjct: 59 GKHVPR 64
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 44.0 bits (99), Expect = 3e-05
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = +3
Query: 66 MRXIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXXL----ERXXVYYNEASG 233
MR + I GQ G Q+G WE+ EHGI P G SD + + +++E
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQM--PSDKTVGGGDDAFNTFFSETGA 58
Query: 234 GKYVPR 251
GK+VPR
Sbjct: 59 GKHVPR 64
>At5g09670.2 68418.m01119 loricrin-related contains weak similarity
to Loricrin (Swiss-Prot:P23490) [Homo sapiens]
Length = 546
Score = 28.7 bits (61), Expect = 1.0
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -1
Query: 311 CPKGXDGQSPXCRAPSRRGGAGHVLAAGGFI 219
C KG +G +P C+A GG LA GG I
Sbjct: 313 CSKGAEGSTPLCKA---HGGGKRCLADGGGI 340
>At5g09670.1 68418.m01118 loricrin-related contains weak similarity
to Loricrin (Swiss-Prot:P23490) [Homo sapiens]
Length = 546
Score = 28.7 bits (61), Expect = 1.0
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -1
Query: 311 CPKGXDGQSPXCRAPSRRGGAGHVLAAGGFI 219
C KG +G +P C+A GG LA GG I
Sbjct: 313 CSKGAEGSTPLCKA---HGGGKRCLADGGGI 340
>At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase GI:7939617 from
[Lycopersicon esculentum]
Length = 887
Score = 27.1 bits (57), Expect = 3.2
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +3
Query: 87 QAGQCGNQIGAKFWEIISDEHGIDPTGAYHG 179
QA G IG ++W IIS + G D T Y G
Sbjct: 678 QAWVNGQHIG-RYWNIISQKDGCDRTCDYRG 707
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 26.6 bits (56), Expect = 4.2
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 75 IVHIQAGQCGNQIGAKFWEIISD 143
I++ A + G+ GA FWE+IS+
Sbjct: 347 IIYASAQKGGSAAGALFWEVISE 369
>At1g27595.1 68414.m03365 expressed protein similar to Symplekin
(SP:Q92797) {Homo sapiens}
Length = 1091
Score = 26.6 bits (56), Expect = 4.2
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 166 PVGSMPCSSEMISQNLAPIW 107
PVG C SE ++Q L +W
Sbjct: 655 PVGKEVCDSERVTQGLGAVW 674
>At5g64550.1 68418.m08112 loricrin-related contains weak similarity
to Loricrin (Swiss-Prot:P23490) [Homo sapiens]
Length = 634
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 311 CPKGXDGQSPXCRAPSRRGGAGHVLAAGGFI 219
C KG +G +P C+A GG + GG I
Sbjct: 372 CTKGAEGSTPLCKA---HGGGKRCMFDGGGI 399
>At5g02220.1 68418.m00143 expressed protein
Length = 72
Score = 25.4 bits (53), Expect = 9.7
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 214 TTMKPPAASTCPAPPRR 264
T + P AS CP PPR+
Sbjct: 21 TMYRIPVASVCPPPPRK 37
>At4g29690.1 68417.m04229 type I phosphodiesterase/nucleotide
pyrophosphatase family protein similar to SP|P22413
Ectonucleotide pyrophosphatase/phosphodiesterase 1
(Plasma-cell membrane glycoprotein PC-1) [Includes:
Alkaline phosphodiesterase I (EC 3.1.4.1); Nucleotide
pyrophosphatase (EC 3.6.1.9) {Homo sapiens}; contains
Pfam profile PF01663: Type I phosphodiesterase /
nucleotide pyrophosphatase
Length = 457
Score = 25.4 bits (53), Expect = 9.7
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -2
Query: 151 PCSSEMISQNLAPIWLPH*PAWICTI 74
P S E+ ++NL P W P W+ +
Sbjct: 126 PVSGELFNRNLNPKWWLGEPLWVTAV 151
>At3g13050.1 68416.m01626 transporter-related low similarity to
apical organic cation transporter [Sus scrofa]
GI:2062135, SP|Q02563 Synaptic vesicle protein 2 (SV2)
{Rattus norvegicus}; contains Pfam profile PF00083:
major facilitator superfamily protein
Length = 500
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 102 GNQIGAKFWEIISDEHG 152
G IGA W I+SD+HG
Sbjct: 72 GMLIGAYSWGIVSDKHG 88
>At1g70990.1 68414.m08190 proline-rich family protein
Length = 176
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/31 (32%), Positives = 12/31 (38%)
Frame = +1
Query: 226 PPAASTCPAPPRRLGARXHGLCPSXPFGQIF 318
PP + CP PP CP P I+
Sbjct: 102 PPPSQACPPPPLPPSPPKKSYCPPPPSTYIY 132
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,901,656
Number of Sequences: 28952
Number of extensions: 94268
Number of successful extensions: 306
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 297
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 399440640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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