Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0409
         (419 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   1.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   2.1  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   2.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.4  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    21   6.4  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = -1

Query: 197 VRDYFPELCSDLIPALTRLDVDDFPHDCTKNLEPPESNIK 78
           V D  P LC+ LI +   L  D        NL+  + N+K
Sbjct: 41  VEDIDPTLCTHLIYSFVGLGDDSRIKHLEPNLDVNQGNLK 80


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +2

Query: 41   FFFYMIKFSKV 73
            +FFY++KF KV
Sbjct: 1028 YFFYLVKFYKV 1038


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +2

Query: 41  FFFYMIKFSKV 73
           +FFY++KF KV
Sbjct: 309 YFFYLVKFYKV 319


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 14/46 (30%), Positives = 18/46 (39%)
 Frame = +3

Query: 159  NQIGAKFWEVISDEHGIDATGAYSGDSDLQLEASMSTITKLQGAST 296
            N+I  + W V  D  G     AY GD  +  E   S   K +   T
Sbjct: 911  NRIRNQRWIVNRDTSGATGPFAYHGDQWVGFEDIKSVRDKAEYIKT 956


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -1

Query: 143 LDVDDFPHDCTKNLEPPESNIK*TL 69
           LD DDF   C K   P  + IK T+
Sbjct: 358 LDTDDFRGICGKGPYPIMNAIKQTI 382


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,260
Number of Sequences: 336
Number of extensions: 2301
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9279512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)