Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0409
(419 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 117 3e-27
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 117 5e-27
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 116 1e-26
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 7e-22
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 97 4e-21
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 81 5e-16
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 2e-11
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 65 2e-11
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 65 3e-11
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 65 3e-11
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 65 3e-11
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 8e-11
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 1e-10
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 1e-10
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 1e-09
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 38 0.003
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.004
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 37 0.008
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 32 0.22
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.39
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.51
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 29 1.2
SB_17458| Best HMM Match : Metalloenzyme (HMM E-Value=0.29) 29 1.6
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 29 2.1
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.6
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 27 4.8
SB_46614| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.8
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 27 4.8
SB_47472| Best HMM Match : zf-CXXC (HMM E-Value=5.9) 27 6.3
SB_34195| Best HMM Match : Init_tRNA_PT (HMM E-Value=2.7) 27 6.3
SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4) 27 8.3
SB_15393| Best HMM Match : Peptidase_M16_C (HMM E-Value=6.6e-05) 27 8.3
SB_11710| Best HMM Match : Urease_alpha (HMM E-Value=0) 27 8.3
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 117 bits (282), Expect = 3e-27
Identities = 52/54 (96%), Positives = 54/54 (100%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
INVYYNEA+GGKYVPRAV+VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN
Sbjct: 260 INVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 313
Score = 92.7 bits (220), Expect = 1e-19
Identities = 41/45 (91%), Positives = 41/45 (91%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREIVH QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLE
Sbjct: 214 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLE 258
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 117 bits (281), Expect = 5e-27
Identities = 51/54 (94%), Positives = 54/54 (100%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
INVYYNEA+GGKYVPRA++VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN
Sbjct: 47 INVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 100
Score = 92.7 bits (220), Expect = 1e-19
Identities = 41/45 (91%), Positives = 41/45 (91%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREIVH QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLE
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLE 45
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 116 bits (278), Expect = 1e-26
Identities = 50/54 (92%), Positives = 54/54 (100%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
INVYYNEA+GGKYVPR+V++DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN
Sbjct: 47 INVYYNEATGGKYVPRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 100
Score = 90.2 bits (214), Expect = 6e-19
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREIV +QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLE
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLE 45
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 99 bits (238), Expect = 7e-22
Identities = 43/46 (93%), Positives = 46/46 (100%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVF 394
INVYYNEA+GGKYVPRA++VDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 47 INVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
Score = 92.7 bits (220), Expect = 1e-19
Identities = 41/45 (91%), Positives = 41/45 (91%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREIVH QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLE
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLE 45
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 97.5 bits (232), Expect = 4e-21
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 287 GKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
GKYVPRAV+VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 45
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 80.6 bits (190), Expect = 5e-16
Identities = 33/46 (71%), Positives = 40/46 (86%)
Frame = +2
Query: 281 SGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
+GG+YVPR+++VDLEPGTMD+VR GP G +FRPDNFV QSGA NN
Sbjct: 11 TGGRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANN 56
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 65.3 bits (152), Expect = 2e-11
Identities = 25/55 (45%), Positives = 37/55 (67%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
S N +++E GK+VPRAV VDLEP +D +R+G + Q+F P+ + G+ A NN
Sbjct: 466 SFNTFFSETGAGKHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANN 520
Score = 62.9 bits (146), Expect = 1e-10
Identities = 25/55 (45%), Positives = 36/55 (65%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
S N +++E GK+VPRAV DLEP +D VR+G + Q+F P+ + G+ A NN
Sbjct: 33 SFNTFFSETGAGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANN 87
Score = 35.9 bits (79), Expect = 0.014
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
RE V I GQ G Q+G WE+ EHGI G D +
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 460
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 65.3 bits (152), Expect = 2e-11
Identities = 27/55 (49%), Positives = 37/55 (67%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
S N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ V G+ A NN
Sbjct: 48 SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANN 102
Score = 64.9 bits (151), Expect = 3e-11
Identities = 26/55 (47%), Positives = 37/55 (67%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
S N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN
Sbjct: 481 SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANN 535
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
MRE + I GQ G QIG WE+ EHGI G D +
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 42
Score = 36.7 bits (81), Expect = 0.008
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 475
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 64.9 bits (151), Expect = 3e-11
Identities = 26/55 (47%), Positives = 37/55 (67%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
S N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN
Sbjct: 47 SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANN 101
Score = 36.7 bits (81), Expect = 0.008
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 41
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 64.9 bits (151), Expect = 3e-11
Identities = 26/55 (47%), Positives = 37/55 (67%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
S N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN
Sbjct: 112 SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANN 166
Score = 64.9 bits (151), Expect = 3e-11
Identities = 26/55 (47%), Positives = 37/55 (67%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
S N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN
Sbjct: 633 SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANN 687
Score = 38.7 bits (86), Expect = 0.002
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSV 346
S N +++E GK+VPRAV VDLEP + +
Sbjct: 560 SFNTFFSETGAGKHVPRAVFVDLEPTVRECI 590
Score = 37.1 bits (82), Expect = 0.006
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 117 IMREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
+ RE + + GQ G QIG WE+ EHGI G D +
Sbjct: 64 LQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 106
Score = 37.1 bits (82), Expect = 0.006
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
+RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 627
Score = 36.7 bits (81), Expect = 0.008
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 554
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 64.9 bits (151), Expect = 3e-11
Identities = 26/55 (47%), Positives = 37/55 (67%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
S N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN
Sbjct: 48 SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANN 102
Score = 37.5 bits (83), Expect = 0.004
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
MRE + I GQ G Q+G WE+ EHGI G D +
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 42
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 63.3 bits (147), Expect = 8e-11
Identities = 25/55 (45%), Positives = 36/55 (65%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
S N +++E GK+VPRAV DLEP +D VR+G + Q+F P+ + G+ A NN
Sbjct: 852 SFNTFFSETGAGKHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANN 906
Score = 62.5 bits (145), Expect = 1e-10
Identities = 25/55 (45%), Positives = 36/55 (65%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
+ N ++ E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN
Sbjct: 419 AFNTFFAETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANN 473
Score = 36.7 bits (81), Expect = 0.008
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 413
Score = 35.1 bits (77), Expect = 0.024
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
RE + + GQ G Q+G WE+ EHGI G D +
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 846
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 62.9 bits (146), Expect = 1e-10
Identities = 25/55 (45%), Positives = 36/55 (65%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
S N +++E GK+VPRAV DLEP +D VR+G + Q+F P+ + G+ A NN
Sbjct: 48 SFNTFFSETGSGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANN 102
Score = 37.1 bits (82), Expect = 0.006
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
MRE + + GQ G Q+G WE+ EHGI G D +
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 42
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 62.5 bits (145), Expect = 1e-10
Identities = 25/55 (45%), Positives = 36/55 (65%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
S N ++ E GK+VPRAV VDLEP +D +R+G + Q+F P+ + G+ A NN
Sbjct: 13 SFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANN 67
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 59.3 bits (137), Expect = 1e-09
Identities = 24/49 (48%), Positives = 35/49 (71%)
Frame = +2
Query: 272 NEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
+EA+ GKYVPRAV+VDLEP +D VR+G + ++ P+ + G+ A NN
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANN 1013
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 41.5 bits (93), Expect = 3e-04
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVR 349
S N +++E GGK+VPRAV VDLEP + ++
Sbjct: 48 SFNTFFSETGGGKHVPRAVFVDLEPSVVGRMK 79
Score = 38.3 bits (85), Expect = 0.003
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
MRE + + GQ G QIG WE+ EHGI G D +
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 42
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 38.3 bits (85), Expect = 0.003
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 236
MRE + I GQ G QIG WE+ EHGI G D
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSD 39
Score = 38.3 bits (85), Expect = 0.003
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEP 328
S N +++E GK+VPRAV VDLEP
Sbjct: 48 SFNTFFSETGAGKHVPRAVFVDLEP 72
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 37.5 bits (83), Expect = 0.004
Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL-QLEASMST 269
MRE + I GQ G QIG WE+ EHGI G D + + S ST
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFST 246
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 36.7 bits (81), Expect = 0.008
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 302 RAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
RAV++D+E G ++++ GP +F + SG GNN
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNN 114
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 31.9 bits (69), Expect = 0.22
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +3
Query: 129 IVHIQAGQCGNQIGAKFWEVISDE 200
IV +Q GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 31.1 bits (67), Expect = 0.39
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 338 DSVRSGPFGQIFRPDNFVFGQSGAGNN 418
D VR+G + Q+F P+ + G+ A NN
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANN 39
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 30.7 bits (66), Expect = 0.51
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 177 FWEVISDEHGIDATG 221
FWEVI++EHGID G
Sbjct: 1 FWEVIAEEHGIDPDG 15
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 29.5 bits (63), Expect = 1.2
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = -3
Query: 408 APDCPKTKLSGRKICPNGPERTESMVPGSRSTITAR----GTYLP 286
A DCP ++ +GR +CP P +S + ++++I GT+ P
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKASIEVNDFTLGTHTP 182
>SB_17458| Best HMM Match : Metalloenzyme (HMM E-Value=0.29)
Length = 190
Score = 29.1 bits (62), Expect = 1.6
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 198 EHGIDATGAYSGDSDLQLEASMSTITK 278
+HG+ TG + GDSD +L+A++ +K
Sbjct: 137 DHGMTRTGDHGGDSDDELDAALFVYSK 163
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 28.7 bits (61), Expect = 2.1
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 344 VRSGPFGQIFRPDNFVFGQSGAGNN 418
VR+G + Q+F P+ + G+ A NN
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANN 27
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 28.7 bits (61), Expect = 2.1
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 344 VRSGPFGQIFRPDNFVFGQSGAGNN 418
VR+G + Q+F P+ + G+ A NN
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANN 27
>SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1010
Score = 27.9 bits (59), Expect = 3.6
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -3
Query: 399 CPKTKLSGRKICPNGPERTESMVPGSRSTITARGTYLPPEA 277
CP+ + RK P+G + + G+ S + ++G +PP A
Sbjct: 456 CPQGNMDYRKAAPDGRDMQQMGQKGNFSQMLSQGRGMPPGA 496
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 27.5 bits (58), Expect = 4.8
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 344 VRSGPFGQIFRPDNFVFGQSGAGNN 418
VR G + +F PD + G+ A NN
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANN 27
>SB_46614| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 388
Score = 27.5 bits (58), Expect = 4.8
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 190 SRTSTALTPRVLTAATPTCSLKHQCLL*RSFRGQVRPASC 309
++ S LT L A P KH+C + + +G +R ASC
Sbjct: 181 TKQSRKLTFIALCATHPRNVAKHRCDIDKGHQGSLRKASC 220
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 27.5 bits (58), Expect = 4.8
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 344 VRSGPFGQIFRPDNFVFGQSGAGNN 418
+R+G + Q+F P+ + G+ A NN
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANN 27
>SB_47472| Best HMM Match : zf-CXXC (HMM E-Value=5.9)
Length = 433
Score = 27.1 bits (57), Expect = 6.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -2
Query: 415 IPRPRLSEDEVVRSEDLPKRPGTDGVHGSRLKVH 314
+P P S+++ +SE + RPG D SR VH
Sbjct: 64 LPPPLYSQNDHQKSEHILLRPGVDLKTASRCTVH 97
>SB_34195| Best HMM Match : Init_tRNA_PT (HMM E-Value=2.7)
Length = 597
Score = 27.1 bits (57), Expect = 6.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 407 PQTVRRRSCPVGRFAQTARN 348
P +R SCPVGR AQ +R+
Sbjct: 404 PNKKKRESCPVGRGAQFSRS 423
>SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4)
Length = 582
Score = 26.6 bits (56), Expect = 8.3
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +3
Query: 114 AIMREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYS 230
A +RE++ +Q G N +G +W + DA S
Sbjct: 25 ATVREVITLQFGHYANFVGTHWWNIQESSFCYDAASPKS 63
>SB_15393| Best HMM Match : Peptidase_M16_C (HMM E-Value=6.6e-05)
Length = 683
Score = 26.6 bits (56), Expect = 8.3
Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 174 KFW-EVISDEHGIDATGAYSGDSDLQLEASMSTIT 275
K W E+++ ++ D YSG DLQ ++++I+
Sbjct: 528 KHWGEILTRQYNFDRACTYSGRGDLQERTTLASIS 562
>SB_11710| Best HMM Match : Urease_alpha (HMM E-Value=0)
Length = 726
Score = 26.6 bits (56), Expect = 8.3
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDS 343
+I+ Y++E +GG + P + V EP + S
Sbjct: 512 TIHTYHSEGAGGGHAPDIIRVCSEPNVLPS 541
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,474,815
Number of Sequences: 59808
Number of extensions: 293831
Number of successful extensions: 722
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 722
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 789494848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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