Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0409
(419 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 116 5e-27
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 114 2e-26
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 112 1e-25
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 112 1e-25
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 110 5e-25
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 110 5e-25
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 76 9e-15
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 76 9e-15
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 64 3e-11
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 63 9e-11
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 62 2e-10
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 61 3e-10
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 61 3e-10
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 61 3e-10
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 61 3e-10
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 59 1e-09
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 59 1e-09
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 58 2e-09
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 58 2e-09
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 58 2e-09
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 58 2e-09
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 58 3e-09
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 58 3e-09
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 55 2e-08
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 44 4e-05
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 44 4e-05
AF003137-9|AAB93646.3| 883|Caenorhabditis elegans Hypothetical ... 29 1.8
AL022271-1|CAA18349.1| 919|Caenorhabditis elegans Hypothetical ... 27 4.1
Z77133-3|CAB00868.2| 149|Caenorhabditis elegans Hypothetical pr... 26 9.5
AL110477-20|CAB76740.3| 728|Caenorhabditis elegans Hypothetical... 26 9.5
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 116 bits (280), Expect = 5e-27
Identities = 51/54 (94%), Positives = 54/54 (100%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
INVYYNEA+GGKYVPRAV+VDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNN
Sbjct: 47 INVYYNEANGGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNN 100
Score = 88.2 bits (209), Expect = 2e-18
Identities = 38/45 (84%), Positives = 40/45 (88%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREIVH+QAGQCGNQIGAKFWEVISDEHGI G Y G+SDLQLE
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLE 45
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 114 bits (275), Expect = 2e-26
Identities = 50/54 (92%), Positives = 53/54 (98%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
INVYYNEASGGKYVPRA +VDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNN
Sbjct: 47 INVYYNEASGGKYVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNN 100
Score = 97.1 bits (231), Expect = 4e-21
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREIVHIQAGQCGNQIGAKFWEVISDEHGID TGAY+GDSDLQLE
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLE 45
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 112 bits (269), Expect = 1e-25
Identities = 49/54 (90%), Positives = 53/54 (98%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
I+VYYNEA+ GKYVPRAV+VDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNN
Sbjct: 47 IDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNN 100
Score = 85.4 bits (202), Expect = 1e-17
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREIVH+QAGQCGNQIG+KFWEVISDEHGI G + G+SDLQLE
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLE 45
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 112 bits (269), Expect = 1e-25
Identities = 49/54 (90%), Positives = 53/54 (98%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
I+VYYNEA+ GKYVPRAV+VDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNN
Sbjct: 47 IDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNN 100
Score = 84.2 bits (199), Expect = 3e-17
Identities = 35/45 (77%), Positives = 40/45 (88%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREIVH+QAGQCGNQIG+KFWEVISDEHGI G + G++DLQLE
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLE 45
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 110 bits (264), Expect = 5e-25
Identities = 48/54 (88%), Positives = 51/54 (94%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
INVYYNEA KYVPRAV+VDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNN
Sbjct: 47 INVYYNEAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNN 100
Score = 91.1 bits (216), Expect = 3e-19
Identities = 40/45 (88%), Positives = 42/45 (93%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREIVHIQAGQCGNQIG+KFWEVISDEHGID +G Y GDSDLQLE
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLE 45
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 110 bits (264), Expect = 5e-25
Identities = 48/54 (88%), Positives = 51/54 (94%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
INVYYNEA KYVPRAV+VDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNN
Sbjct: 47 INVYYNEAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNN 100
Score = 91.1 bits (216), Expect = 3e-19
Identities = 40/45 (88%), Positives = 42/45 (93%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREIVHIQAGQCGNQIG+KFWEVISDEHGID +G Y GDSDLQLE
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLE 45
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 76.2 bits (179), Expect = 9e-15
Identities = 31/56 (55%), Positives = 41/56 (73%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLEASMSTITKLQG 287
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLE S +++G
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEG 56
Score = 70.1 bits (164), Expect = 6e-13
Identities = 30/54 (55%), Positives = 41/54 (75%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
I YY E G KYVPRA++VDL+P +++ VRS +G++F P+N V G+SGAGNN
Sbjct: 47 ITSYYKEMEGRKYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNN 100
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 76.2 bits (179), Expect = 9e-15
Identities = 31/56 (55%), Positives = 41/56 (73%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLEASMSTITKLQG 287
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLE S +++G
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEG 56
Score = 70.1 bits (164), Expect = 6e-13
Identities = 30/54 (55%), Positives = 41/54 (75%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
I YY E G KYVPRA++VDL+P +++ VRS +G++F P+N V G+SGAGNN
Sbjct: 47 ITSYYKEMEGRKYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNN 100
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 64.5 bits (150), Expect = 3e-11
Identities = 24/55 (43%), Positives = 38/55 (69%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
S+ +++E+ GK+VPRA+ VDLEP +D +R+G +G +F PD + G+ A NN
Sbjct: 51 SLQAFFSESMNGKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANN 105
Score = 37.9 bits (84), Expect = 0.003
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 221
RE V I GQ G QIG WE+ EHG+D G
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAG 38
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 62.9 bits (146), Expect = 9e-11
Identities = 24/55 (43%), Positives = 37/55 (67%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
S N +++E GK+VPRA+ VDLEP +D VR+G + ++F P+ + G+ A NN
Sbjct: 48 SYNTFFSETPSGKHVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANN 102
Score = 41.1 bits (92), Expect = 3e-04
Identities = 21/45 (46%), Positives = 24/45 (53%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREIV I GQ G QIG WE+ EHGI G D+ +E
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVE 45
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 62.1 bits (144), Expect = 2e-10
Identities = 24/55 (43%), Positives = 37/55 (67%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
S N +++E GK+VPRA+MVDLEP +D +R+G + +F P+ + G+ A NN
Sbjct: 53 SFNTFFSETMAGKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANN 107
Score = 37.1 bits (82), Expect = 0.005
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
RE++ I GQ G Q+G WE+ EHGI G + + L ++
Sbjct: 7 REVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVD 50
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 61.3 bits (142), Expect = 3e-10
Identities = 23/55 (41%), Positives = 37/55 (67%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
S + +++E G++VPRAVMVDLEP +D +R+G + +F P+ + G+ A NN
Sbjct: 48 SFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANN 102
Score = 41.1 bits (92), Expect = 3e-04
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
MRE++ I GQ G QIG WE+ EHGI G D L
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSL 42
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 61.3 bits (142), Expect = 3e-10
Identities = 23/55 (41%), Positives = 37/55 (67%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
S + +++E G++VPRAVMVDLEP +D +R+G + +F P+ + G+ A NN
Sbjct: 47 SFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANN 101
Score = 39.1 bits (87), Expect = 0.001
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
RE++ I GQ G QIG WE+ EHGI G D L
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSL 41
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 61.3 bits (142), Expect = 3e-10
Identities = 23/55 (41%), Positives = 37/55 (67%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
S + +++E G++VPRAVMVDLEP +D +R+G + +F P+ + G+ A NN
Sbjct: 48 SFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANN 102
Score = 41.1 bits (92), Expect = 3e-04
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
MRE++ I GQ G QIG WE+ EHGI G D L
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSL 42
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 61.3 bits (142), Expect = 3e-10
Identities = 23/55 (41%), Positives = 37/55 (67%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
S + +++E G++VPRAVMVDLEP +D +R+G + +F P+ + G+ A NN
Sbjct: 48 SFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANN 102
Score = 41.1 bits (92), Expect = 3e-04
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
MRE++ I GQ G QIG WE+ EHGI G D L
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSL 42
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 58.8 bits (136), Expect = 1e-09
Identities = 23/54 (42%), Positives = 36/54 (66%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGN 415
+IN ++ E +GGK+VPR + VDLEP +D VR+G + +F P+ + G+ A N
Sbjct: 54 TINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAAN 107
Score = 37.9 bits (84), Expect = 0.003
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 236
RE++ I GQ G QIG WE+ EHGI G + D
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVED 45
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 58.8 bits (136), Expect = 1e-09
Identities = 23/54 (42%), Positives = 36/54 (66%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGN 415
+IN ++ E +GGK+VPR + VDLEP +D VR+G + +F P+ + G+ A N
Sbjct: 26 TINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAAN 79
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 58.4 bits (135), Expect = 2e-09
Identities = 20/55 (36%), Positives = 36/55 (65%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
S ++++ G+YVPR++ VDLEP +D +R+G + ++F P+ + G+ A NN
Sbjct: 46 SFTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANN 100
Score = 38.7 bits (86), Expect = 0.002
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 221
MRE++ I GQ G QIG WE+ EHGI G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 58.4 bits (135), Expect = 2e-09
Identities = 20/55 (36%), Positives = 36/55 (65%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
S ++++ G+YVPR++ VDLEP +D +R+G + ++F P+ + G+ A NN
Sbjct: 46 SFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANN 100
Score = 40.7 bits (91), Expect = 4e-04
Identities = 19/46 (41%), Positives = 23/46 (50%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLEA 257
MRE++ I GQ G QIG WE+ EHGI G D E+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGES 46
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 58.4 bits (135), Expect = 2e-09
Identities = 20/55 (36%), Positives = 36/55 (65%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
S ++++ G+YVPR++ VDLEP +D +R+G + ++F P+ + G+ A NN
Sbjct: 46 SFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANN 100
Score = 40.7 bits (91), Expect = 4e-04
Identities = 19/46 (41%), Positives = 23/46 (50%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLEA 257
MRE++ I GQ G QIG WE+ EHGI G D E+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGES 46
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 58.4 bits (135), Expect = 2e-09
Identities = 20/55 (36%), Positives = 36/55 (65%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
S ++++ G+YVPR++ VDLEP +D +R+G + ++F P+ + G+ A NN
Sbjct: 46 SFTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANN 100
Score = 38.7 bits (86), Expect = 0.002
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 221
MRE++ I GQ G QIG WE+ EHGI G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 58.0 bits (134), Expect = 3e-09
Identities = 20/55 (36%), Positives = 36/55 (65%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
S ++++ G+YVPR++ VDLEP +D +R+G + ++F P+ + G+ A NN
Sbjct: 46 SFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANN 100
Score = 38.7 bits (86), Expect = 0.002
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 221
MRE++ I GQ G QIG WE+ EHGI G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 58.0 bits (134), Expect = 3e-09
Identities = 20/55 (36%), Positives = 36/55 (65%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
S ++++ G+YVPR++ VDLEP +D +R+G + ++F P+ + G+ A NN
Sbjct: 46 SFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANN 100
Score = 38.7 bits (86), Expect = 0.002
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 221
MRE++ I GQ G QIG WE+ EHGI G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 55.2 bits (127), Expect = 2e-08
Identities = 19/55 (34%), Positives = 37/55 (67%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN 418
S+ ++++ G++VPR++ VDLEP +D +R+G + ++F P+ + G+ A NN
Sbjct: 45 SLGTFFSDTGYGRHVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANN 99
Score = 37.1 bits (82), Expect = 0.005
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGI 209
MRE++ I GQ G QIG WE+ EHGI
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGI 30
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 44.0 bits (99), Expect = 4e-05
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = +2
Query: 260 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNN 418
++ + +A YVPRAV+VDLEP ++ + P F +F DN GAGNN
Sbjct: 50 DLLFYQADDDHYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNN 105
Score = 42.7 bits (96), Expect = 1e-04
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 129 IVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
++ + GQCGNQ+ FW+ + DEHGI+ G + + D+
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM 45
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 44.0 bits (99), Expect = 4e-05
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = +2
Query: 260 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNN 418
++ + +A YVPRAV+VDLEP ++ + P F +F DN GAGNN
Sbjct: 50 DLLFYQADDDHYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNN 105
Score = 42.7 bits (96), Expect = 1e-04
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 129 IVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
++ + GQCGNQ+ FW+ + DEHGI+ G + + D+
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM 45
>AF003137-9|AAB93646.3| 883|Caenorhabditis elegans Hypothetical
protein C27A12.9 protein.
Length = 883
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +3
Query: 165 IGAKFWEVISDEHGIDATGAYSGDSDLQLEASMSTITK 278
IG + SD+HG+ +TG + G+S+ ++ A + +K
Sbjct: 245 IGQTIETMKSDDHGMTSTGDHGGESENEIRAGILVHSK 282
>AL022271-1|CAA18349.1| 919|Caenorhabditis elegans Hypothetical
protein F32F2.1 protein.
Length = 919
Score = 27.5 bits (58), Expect = 4.1
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +1
Query: 76 YLIFDSGGSKFLVQS*GKSSTSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCSL 252
Y I D SK+++Q ++ + +R + S +TP VL A T C++
Sbjct: 64 YRILDQNESKYILQQQSAAAIEEKKGTLLRRKSSKKLIEPLPMIITPPVLMARTQCCAV 122
>Z77133-3|CAB00868.2| 149|Caenorhabditis elegans Hypothetical
protein K03A11.5 protein.
Length = 149
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 131 DFPHDCTKNLEPPESN 84
D+P+D KNL P ESN
Sbjct: 42 DYPYDICKNLYPRESN 57
>AL110477-20|CAB76740.3| 728|Caenorhabditis elegans Hypothetical
protein Y113G7B.18 protein.
Length = 728
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1
Query: 209 NAVLVRDYFPELCSDLIPALTRLDV 135
N +L+RD F +C+D I RL +
Sbjct: 396 NTLLLRDVFKTICTDAIKLRNRLSI 420
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,723,113
Number of Sequences: 27780
Number of extensions: 226989
Number of successful extensions: 681
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 682028672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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