Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0404
(429 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44) 55 2e-08
SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0) 50 1e-06
SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 8e-06
SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_58507| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_55959| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_15869| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
>SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44)
Length = 251
Score = 55.2 bits (127), Expect = 2e-08
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = +2
Query: 140 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNE 253
DKEE V AKLAEQAERYDDM +MKEV + G ELS E
Sbjct: 3 DKEEHVYMAKLAEQAERYDDMVNSMKEVAKMGTELSTE 40
Score = 34.3 bits (75), Expect = 0.044
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Frame = +1
Query: 262 LLSVAYKNVVGXRRSXGVSFPQLNRKTRVQKGN-----SXWQRYRVKVXKELXEICYDVL 426
LLSVAYKNV+G RR+ + +K KG + YR + +EL IC ++L
Sbjct: 44 LLSVAYKNVIGARRASWRIITSIEQKEE-SKGEDMAKLEMIRNYRKTIEEELKTICGEIL 102
>SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0)
Length = 248
Score = 49.6 bits (113), Expect = 1e-06
Identities = 23/45 (51%), Positives = 30/45 (66%)
Frame = +2
Query: 119 PSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNE 253
P+ +EEL+ AK+AEQAERYDDM AM VT+ G L++E
Sbjct: 3 PNFVSKCSREELIHLAKMAEQAERYDDMVNAMSAVTKEGKPLNDE 47
Score = 37.1 bits (82), Expect = 0.006
Identities = 22/55 (40%), Positives = 30/55 (54%)
Frame = +1
Query: 262 LLSVAYKNVVGXRRSXGVSFPQLNRKTRVQKGNSXWQRYRVKVXKELXEICYDVL 426
LLSVAYKNVVG RRS + +K + + ++YR + EL C +VL
Sbjct: 51 LLSVAYKNVVGARRSSWRVISSMEQKAPEEMA-ALTKKYREDITNELNGKCAEVL 104
>SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 46.8 bits (106), Expect = 8e-06
Identities = 22/56 (39%), Positives = 33/56 (58%)
Frame = +1
Query: 262 LLSVAYKNVVGXRRSXGVSFPQLNRKTRVQKGNSXWQRYRVKVXKELXEICYDVLG 429
LLSV+YKN+VG RRS + KT + ++Y+ + KEL ++C +VLG
Sbjct: 124 LLSVSYKNIVGQRRSSWRVISSIEEKTAESSSLAIVKKYKACIEKELKDLCKEVLG 179
Score = 45.6 bits (103), Expect = 2e-05
Identities = 22/41 (53%), Positives = 29/41 (70%)
Frame = +2
Query: 131 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNE 253
M V +E L+ AKL+EQ +RYD+MA MKEV+E +LS E
Sbjct: 80 MMVVRETLIYNAKLSEQCDRYDEMAKIMKEVSEKYPKLSKE 120
>SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 39.5 bits (88), Expect = 0.001
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 262 LLSVAYKNVVGXRRSXGVSFPQLNRKTR-VQKGNSXWQRYRVKVXKELXEICYDVL 426
LLSVAYKNVVG +RS + +K ++ + YR + EL E+C VL
Sbjct: 22 LLSVAYKNVVGAKRSSWRVISSIEQKLEGSERKKQNTETYRQTIENELNEVCETVL 77
Score = 33.5 bits (73), Expect = 0.076
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +3
Query: 309 WRVISSIEQKNEGSER 356
WRVISSIEQK EGSER
Sbjct: 38 WRVISSIEQKLEGSER 53
>SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 607
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +2
Query: 131 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNE 253
M + ELVQ AKLAEQ ER++D+ MK+ E L+ E
Sbjct: 186 MQDSRNELVQLAKLAEQTERFEDVILYMKKAIEINPSLNKE 226
>SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 994
Score = 27.5 bits (58), Expect = 5.0
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 107 ISPLPSSTMSVDKEELVQRAKLAEQAERYDDMA 205
+SPLPS+ +E+V KLAE+ E ++++
Sbjct: 643 VSPLPSTATEDQMQEVVDSNKLAEKKEVTEEVS 675
>SB_58507| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2353
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +1
Query: 85 LPTRASVN*SSSIVHDVRRQGRTGA 159
+P RAS +SS +HD R+GRT A
Sbjct: 665 IPERASRRHASSALHDSLRRGRTTA 689
>SB_55959| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 27.1 bits (57), Expect = 6.6
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +1
Query: 334 RKTRVQKGNSXWQRYRVKVXKELXEI 411
RKT +G+ W RY +++ K L ++
Sbjct: 47 RKTPCGEGSKTWDRYEMRIHKRLIDL 72
>SB_15869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1420
Score = 26.6 bits (56), Expect = 8.7
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -3
Query: 274 QLKGGSSLVAKFDAGFRHFLHRGRHVVISL 185
Q+ GG SL A DAG R +RG H +SL
Sbjct: 1374 QMGGGDSLYASIDAGVRGAKNRG-HNKLSL 1402
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,327,383
Number of Sequences: 59808
Number of extensions: 199424
Number of successful extensions: 578
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 575
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 826502419
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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