Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0404
         (429 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66564-5|CAC42300.2|  198|Caenorhabditis elegans Hypothetical pr...    69   1e-12
Z66564-2|CAA91474.1|  248|Caenorhabditis elegans Hypothetical pr...    69   1e-12
Z73910-2|CAA98138.1|  248|Caenorhabditis elegans Hypothetical pr...    69   2e-12
U05038-1|AAA61872.1|  248|Caenorhabditis elegans 14-3-3 protein ...    69   2e-12
Z68216-1|CAA92459.1|  493|Caenorhabditis elegans Hypothetical pr...    27   5.7  
AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical ...    27   5.7  
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote...    27   7.5  
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote...    27   7.5  
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote...    27   7.5  

>Z66564-5|CAC42300.2|  198|Caenorhabditis elegans Hypothetical
           protein F52D10.3b protein.
          Length = 198

 Score = 68.9 bits (161), Expect = 1e-12
 Identities = 34/41 (82%), Positives = 36/41 (87%)
 Frame = +2

Query: 131 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNE 253
           MS  KEELV RAKLAEQAERYDDMAA+MK+VTE G ELSNE
Sbjct: 1   MSDGKEELVNRAKLAEQAERYDDMAASMKKVTELGAELSNE 41



 Score = 51.2 bits (117), Expect = 3e-07
 Identities = 29/56 (51%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
 Frame = +1

Query: 262 LLSVAYKNVVGXRRSXGVSFPQLNRKTR-VQKGNSXWQRYRVKVXKELXEICYDVL 426
           LLSVAYKNVVG RRS       + +KT   +K     + YR KV KEL +IC DVL
Sbjct: 45  LLSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQMAKEYREKVEKELRDICQDVL 100



 Score = 40.3 bits (90), Expect = 6e-04
 Identities = 18/22 (81%), Positives = 19/22 (86%)
 Frame = +3

Query: 309 WRVISSIEQKNEGSERXQXMAK 374
           WRVISSIEQK EGSE+ Q MAK
Sbjct: 61  WRVISSIEQKTEGSEKKQQMAK 82


>Z66564-2|CAA91474.1|  248|Caenorhabditis elegans Hypothetical
           protein F52D10.3a protein.
          Length = 248

 Score = 68.9 bits (161), Expect = 1e-12
 Identities = 34/41 (82%), Positives = 36/41 (87%)
 Frame = +2

Query: 131 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNE 253
           MS  KEELV RAKLAEQAERYDDMAA+MK+VTE G ELSNE
Sbjct: 1   MSDGKEELVNRAKLAEQAERYDDMAASMKKVTELGAELSNE 41



 Score = 51.2 bits (117), Expect = 3e-07
 Identities = 29/56 (51%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
 Frame = +1

Query: 262 LLSVAYKNVVGXRRSXGVSFPQLNRKTR-VQKGNSXWQRYRVKVXKELXEICYDVL 426
           LLSVAYKNVVG RRS       + +KT   +K     + YR KV KEL +IC DVL
Sbjct: 45  LLSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQMAKEYREKVEKELRDICQDVL 100



 Score = 40.3 bits (90), Expect = 6e-04
 Identities = 18/22 (81%), Positives = 19/22 (86%)
 Frame = +3

Query: 309 WRVISSIEQKNEGSERXQXMAK 374
           WRVISSIEQK EGSE+ Q MAK
Sbjct: 61  WRVISSIEQKTEGSEKKQQMAK 82


>Z73910-2|CAA98138.1|  248|Caenorhabditis elegans Hypothetical
           protein M117.2 protein.
          Length = 248

 Score = 68.5 bits (160), Expect = 2e-12
 Identities = 35/41 (85%), Positives = 36/41 (87%)
 Frame = +2

Query: 131 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNE 253
           MS   EELVQRAKLAEQAERYDDMAAAMK+VTE G ELSNE
Sbjct: 1   MSDTVEELVQRAKLAEQAERYDDMAAAMKKVTEQGQELSNE 41



 Score = 52.0 bits (119), Expect = 2e-07
 Identities = 29/56 (51%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
 Frame = +1

Query: 262 LLSVAYKNVVGXRRSXGVSFPQLNRKTR-VQKGNSXWQRYRVKVXKELXEICYDVL 426
           LLSVAYKNVVG RRS       + +KT   +K     + YRVKV +EL +IC DVL
Sbjct: 45  LLSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQLAKEYRVKVEQELNDICQDVL 100



 Score = 39.1 bits (87), Expect = 0.001
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = +3

Query: 309 WRVISSIEQKNEGSERXQXMAK 374
           WRVISSIEQK EGSE+ Q +AK
Sbjct: 61  WRVISSIEQKTEGSEKKQQLAK 82


>U05038-1|AAA61872.1|  248|Caenorhabditis elegans 14-3-3 protein
           protein.
          Length = 248

 Score = 68.5 bits (160), Expect = 2e-12
 Identities = 35/41 (85%), Positives = 36/41 (87%)
 Frame = +2

Query: 131 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNE 253
           MS   EELVQRAKLAEQAERYDDMAAAMK+VTE G ELSNE
Sbjct: 1   MSDTVEELVQRAKLAEQAERYDDMAAAMKKVTEQGQELSNE 41



 Score = 52.0 bits (119), Expect = 2e-07
 Identities = 29/56 (51%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
 Frame = +1

Query: 262 LLSVAYKNVVGXRRSXGVSFPQLNRKTR-VQKGNSXWQRYRVKVXKELXEICYDVL 426
           LLSVAYKNVVG RRS       + +KT   +K     + YRVKV +EL +IC DVL
Sbjct: 45  LLSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQLAKEYRVKVEQELNDICQDVL 100



 Score = 39.1 bits (87), Expect = 0.001
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = +3

Query: 309 WRVISSIEQKNEGSERXQXMAK 374
           WRVISSIEQK EGSE+ Q +AK
Sbjct: 61  WRVISSIEQKTEGSEKKQQLAK 82


>Z68216-1|CAA92459.1|  493|Caenorhabditis elegans Hypothetical
           protein F27C8.1 protein.
          Length = 493

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = +3

Query: 51  CLNL-LVQIHFSPSDKGISELVLFHRPRCPSTRKNWCNVPNWPNKLSDMTT 200
           C+ L L+ +  +P D GI  L++            W N P W N+  D +T
Sbjct: 427 CIALVLIPMVAAPRDTGIGLLIMLSAVPVYGIFIGWKNKPKWFNEFIDSST 477


>AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical
           protein ZC132.5 protein.
          Length = 1277

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +3

Query: 66  VQIHFSPSDKGISELVLFHRPRCPSTRKN 152
           +Q+H + SD+ ++ ++    P  P TR+N
Sbjct: 274 LQVHLNESDRDVTRVLWVKNPDLPPTREN 302


>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
            protein.
          Length = 10578

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -1

Query: 174  ANLARCTSSSLSTDIVDDGRGL 109
            AN A C S+S + D+VDD  GL
Sbjct: 3972 ANEAGCESTSCTIDVVDDHLGL 3993


>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
            protein.
          Length = 18519

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -1

Query: 174  ANLARCTSSSLSTDIVDDGRGL 109
            AN A C S+S + D+VDD  GL
Sbjct: 3972 ANEAGCESTSCTIDVVDDHLGL 3993


>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
            protein.
          Length = 18534

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -1

Query: 174  ANLARCTSSSLSTDIVDDGRGL 109
            AN A C S+S + D+VDD  GL
Sbjct: 3972 ANEAGCESTSCTIDVVDDHLGL 3993


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,480,465
Number of Sequences: 27780
Number of extensions: 150833
Number of successful extensions: 403
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 399
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)